RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
PSMC3-204ENST00000527906 SHANK2Q9UPX8 1470 aa16.66■□□□□ 0.26
PSMC3-204ENST00000527906 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
PSMC3-204ENST00000527906 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
PSMC3-204ENST00000527906 KIAA1107Q9UPP5 1409 aa16.63■□□□□ 0.25
PSMC3-204ENST00000527906 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
PSMC3-204ENST00000527906 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
PSMC3-204ENST00000527906 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
PSMC3-204ENST00000527906 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
PSMC3-204ENST00000527906 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
PSMC3-204ENST00000527906 ARHGEF5Q12774 1597 aa16.61■□□□□ 0.25
PSMC3-204ENST00000527906 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
PSMC3-204ENST00000527906 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
PSMC3-204ENST00000527906 GGT6Q6P531 493 aa16.58■□□□□ 0.24
PSMC3-204ENST00000527906 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.24
PSMC3-204ENST00000527906 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
PSMC3-204ENST00000527906 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
PSMC3-204ENST00000527906 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
PSMC3-204ENST00000527906 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
PSMC3-204ENST00000527906 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
PSMC3-204ENST00000527906 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
PSMC3-204ENST00000527906 POLR1AO95602 1720 aaPredicted RBP16.55■□□□□ 0.24
PSMC3-204ENST00000527906 A2MP01023 1474 aa16.54■□□□□ 0.24
PSMC3-204ENST00000527906 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
PSMC3-204ENST00000527906 CROCC2H7BZ55 1655 aa16.54■□□□□ 0.24
PSMC3-204ENST00000527906 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
PSMC3-204ENST00000527906 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
PSMC3-204ENST00000527906 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
PSMC3-204ENST00000527906 ATP7AQ04656 1500 aa16.52■□□□□ 0.24
PSMC3-204ENST00000527906 ANKLE2Q86XL3 938 aa16.52■□□□□ 0.24
PSMC3-204ENST00000527906 DAPK1P53355 1430 aa16.52■□□□□ 0.23
PSMC3-204ENST00000527906 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
PSMC3-204ENST00000527906 ABCC5O15440 1437 aa16.51■□□□□ 0.23
PSMC3-204ENST00000527906 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
PSMC3-204ENST00000527906 TNRQ92752 1358 aa16.51■□□□□ 0.23
PSMC3-204ENST00000527906 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
PSMC3-204ENST00000527906 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
PSMC3-204ENST00000527906 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
PSMC3-204ENST00000527906 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
PSMC3-204ENST00000527906 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
PSMC3-204ENST00000527906 MED14O60244 1454 aa16.48■□□□□ 0.23
PSMC3-204ENST00000527906 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
PSMC3-204ENST00000527906 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
PSMC3-204ENST00000527906 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
PSMC3-204ENST00000527906 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
PSMC3-204ENST00000527906 ROCK1Q13464 1354 aa16.46■□□□□ 0.23
PSMC3-204ENST00000527906 THEMISQ8N1K5 641 aaPredicted RBP16.45■□□□□ 0.22
PSMC3-204ENST00000527906 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
PSMC3-204ENST00000527906 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
PSMC3-204ENST00000527906 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
PSMC3-204ENST00000527906 PZPP20742 1482 aa16.42■□□□□ 0.22
PSMC3-204ENST00000527906 SYNMO15061 1565 aa16.42■□□□□ 0.22
PSMC3-204ENST00000527906 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
PSMC3-204ENST00000527906 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
PSMC3-204ENST00000527906 FAM135AQ9P2D6 1515 aa16.4■□□□□ 0.22
PSMC3-204ENST00000527906 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
PSMC3-204ENST00000527906 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
PSMC3-204ENST00000527906 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
PSMC3-204ENST00000527906 NLRP1Q9C000 1473 aa16.39■□□□□ 0.21
PSMC3-204ENST00000527906 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
PSMC3-204ENST00000527906 DHX29Q7Z478 1369 aaKnown RBP16.37■□□□□ 0.21
PSMC3-204ENST00000527906 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
PSMC3-204ENST00000527906 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
PSMC3-204ENST00000527906 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
PSMC3-204ENST00000527906 ITGAEP38570 1179 aa16.35■□□□□ 0.21
PSMC3-204ENST00000527906 KIF3BO15066 747 aa16.34■□□□□ 0.21
PSMC3-204ENST00000527906 WASHC2CQ9Y4E1 1318 aa16.34■□□□□ 0.21
PSMC3-204ENST00000527906 KIF15Q9NS87 1388 aa16.34■□□□□ 0.21
PSMC3-204ENST00000527906 NAIPQ13075 1403 aa16.34■□□□□ 0.21
PSMC3-204ENST00000527906 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
PSMC3-204ENST00000527906 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
PSMC3-204ENST00000527906 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
PSMC3-204ENST00000527906 ACIN1Q9UKV3 1341 aaKnown RBP16.32■□□□□ 0.2
PSMC3-204ENST00000527906 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
PSMC3-204ENST00000527906 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
PSMC3-204ENST00000527906 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
PSMC3-204ENST00000527906 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
PSMC3-204ENST00000527906 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
PSMC3-204ENST00000527906 ZC3H13Q5T200 1668 aaKnown RBP16.28■□□□□ 0.2
PSMC3-204ENST00000527906 HRCP23327 699 aa16.28■□□□□ 0.2
PSMC3-204ENST00000527906 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
PSMC3-204ENST00000527906 XIRP1Q702N8 1843 aaKnown RBP16.25■□□□□ 0.19
PSMC3-204ENST00000527906 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
PSMC3-204ENST00000527906 UNC13BO14795 1591 aa16.23■□□□□ 0.19
PSMC3-204ENST00000527906 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
PSMC3-204ENST00000527906 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
PSMC3-204ENST00000527906 LTKP29376 864 aa16.22■□□□□ 0.19
PSMC3-204ENST00000527906 TMEM94Q12767 1356 aa16.22■□□□□ 0.19
PSMC3-204ENST00000527906 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
PSMC3-204ENST00000527906 ERVK-7P63135 1459 aa16.21■□□□□ 0.19
PSMC3-204ENST00000527906 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
PSMC3-204ENST00000527906 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
PSMC3-204ENST00000527906 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
PSMC3-204ENST00000527906 JCADQ9P266 1359 aa16.2■□□□□ 0.18
PSMC3-204ENST00000527906 ARHGAP23Q9P227 1491 aa16.18■□□□□ 0.18
PSMC3-204ENST00000527906 UBR1Q8IWV7 1749 aa16.17■□□□□ 0.18
PSMC3-204ENST00000527906 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
PSMC3-204ENST00000527906 ABCC3O15438 1527 aa16.17■□□□□ 0.18
PSMC3-204ENST00000527906 SLIT1O75093 1534 aa16.17■□□□□ 0.18
PSMC3-204ENST00000527906 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms