RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 DUOX2Q9NRD8 1548 aa28.87■■■□□ 2.21
UBXN1-208ENST00000527421 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
UBXN1-208ENST00000527421 KDM5DQ9BY66 1539 aa28.85■■■□□ 2.21
UBXN1-208ENST00000527421 NPATQ14207 1427 aa28.85■■■□□ 2.21
UBXN1-208ENST00000527421 HSPA2P54652 639 aa28.84■■■□□ 2.21
UBXN1-208ENST00000527421 KIF15Q9NS87 1388 aa28.84■■■□□ 2.21
UBXN1-208ENST00000527421 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
UBXN1-208ENST00000527421 ERBINQ96RT1 1412 aa28.78■■■□□ 2.2
UBXN1-208ENST00000527421 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
UBXN1-208ENST00000527421 ANKRD30AQ9BXX3 1397 aa28.77■■■□□ 2.2
UBXN1-208ENST00000527421 ZC3H13Q5T200 1668 aaKnown RBP28.77■■■□□ 2.2
UBXN1-208ENST00000527421 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.19
UBXN1-208ENST00000527421 RRP7BPQ9NSQ0 103 aa28.76■■■□□ 2.19
UBXN1-208ENST00000527421 MROH1Q8NDA8 1641 aa28.76■■■□□ 2.19
UBXN1-208ENST00000527421 WASHC2CQ9Y4E1 1318 aa28.75■■■□□ 2.19
UBXN1-208ENST00000527421 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
UBXN1-208ENST00000527421 MYO3AQ8NEV4 1616 aa28.74■■■□□ 2.19
UBXN1-208ENST00000527421 CHIC2Q9UKJ5 165 aa28.74■■■□□ 2.19
UBXN1-208ENST00000527421 ABCC3O15438 1527 aa28.72■■■□□ 2.19
UBXN1-208ENST00000527421 PZPP20742 1482 aa28.72■■■□□ 2.19
UBXN1-208ENST00000527421 NCOA1Q15788 1441 aa28.71■■■□□ 2.19
UBXN1-208ENST00000527421 PRDM15P57071 1507 aaPredicted RBP28.7■■■□□ 2.19
UBXN1-208ENST00000527421 ZNF142P52746 1687 aaPredicted RBP28.7■■■□□ 2.18
UBXN1-208ENST00000527421 CEP152O94986 1710 aa28.69■■■□□ 2.18
UBXN1-208ENST00000527421 DEPDC5O75140 1603 aa28.68■■■□□ 2.18
UBXN1-208ENST00000527421 CEP170BQ9Y4F5 1589 aaPredicted RBP28.66■■■□□ 2.18
UBXN1-208ENST00000527421 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
UBXN1-208ENST00000527421 STRCQ7RTU9 1775 aa28.64■■■□□ 2.18
UBXN1-208ENST00000527421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.17
UBXN1-208ENST00000527421 TNRQ92752 1358 aa28.62■■■□□ 2.17
UBXN1-208ENST00000527421 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
UBXN1-208ENST00000527421 A2ML1A8K2U0 1454 aa28.58■■■□□ 2.17
UBXN1-208ENST00000527421 KANK1Q14678 1352 aa28.57■■■□□ 2.16
UBXN1-208ENST00000527421 ANKRD50Q9ULJ7 1429 aa28.57■■■□□ 2.16
UBXN1-208ENST00000527421 ROCK1Q13464 1354 aa28.56■■■□□ 2.16
UBXN1-208ENST00000527421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.56■■■□□ 2.16
UBXN1-208ENST00000527421 SPATA31D1Q6ZQQ2 1576 aa28.55■■■□□ 2.16
UBXN1-208ENST00000527421 RRBP1Q9P2E9 1410 aaKnown RBP28.55■■■□□ 2.16
UBXN1-208ENST00000527421 VWDEQ8N2E2 1590 aa28.54■■■□□ 2.16
UBXN1-208ENST00000527421 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
UBXN1-208ENST00000527421 ITGAEP38570 1179 aa28.52■■■□□ 2.16
UBXN1-208ENST00000527421 DMRT2Q9Y5R5 561 aa28.52■■■□□ 2.16
UBXN1-208ENST00000527421 PLA2R1Q13018 1463 aa28.52■■■□□ 2.16
UBXN1-208ENST00000527421 NLRP1Q9C000 1473 aa28.52■■■□□ 2.16
UBXN1-208ENST00000527421 ARHGAP31Q2M1Z3 1444 aa28.51■■■□□ 2.15
UBXN1-208ENST00000527421 LMTK2Q8IWU2 1503 aa28.5■■■□□ 2.15
UBXN1-208ENST00000527421 CFAP65Q6ZU64 1925 aaKnown RBP28.5■■■□□ 2.15
UBXN1-208ENST00000527421 CERKQ8TCT0 537 aa28.49■■■□□ 2.15
UBXN1-208ENST00000527421 PTPRTO14522 1441 aa28.47■■■□□ 2.15
UBXN1-208ENST00000527421 UNC13BO14795 1591 aa28.45■■■□□ 2.15
UBXN1-208ENST00000527421 EFCAB6Q5THR3 1501 aa28.44■■■□□ 2.14
UBXN1-208ENST00000527421 UGGT1Q9NYU2 1555 aa28.43■■■□□ 2.14
UBXN1-208ENST00000527421 POLR1AO95602 1720 aaPredicted RBP28.4■■■□□ 2.14
UBXN1-208ENST00000527421 PKD2Q13563 968 aa28.4■■■□□ 2.14
UBXN1-208ENST00000527421 NCKAP5LQ9HCH0 1330 aa28.39■■■□□ 2.13
UBXN1-208ENST00000527421 TET3O43151 1660 aa28.38■■■□□ 2.13
UBXN1-208ENST00000527421 GCC2Q8IWJ2 1684 aa28.36■■■□□ 2.13
UBXN1-208ENST00000527421 THEMISQ8N1K5 641 aaPredicted RBP28.35■■■□□ 2.13
UBXN1-208ENST00000527421 UBR1Q8IWV7 1749 aa28.35■■■□□ 2.13
UBXN1-208ENST00000527421 IQGAP3Q86VI3 1631 aa28.34■■■□□ 2.13
UBXN1-208ENST00000527421 RPRD2Q5VT52 1461 aaKnown RBP28.34■■■□□ 2.13
UBXN1-208ENST00000527421 NEURL4Q96JN8 1562 aa28.32■■■□□ 2.12
UBXN1-208ENST00000527421 SYNMO15061 1565 aa28.31■■■□□ 2.12
UBXN1-208ENST00000527421 PIK3C2BO00750 1634 aa28.3■■■□□ 2.12
UBXN1-208ENST00000527421 NOS1P29475 1434 aa28.29■■■□□ 2.12
UBXN1-208ENST00000527421 ANKLE2Q86XL3 938 aa28.27■■■□□ 2.12
UBXN1-208ENST00000527421 NAIPQ13075 1403 aa28.26■■■□□ 2.11
UBXN1-208ENST00000527421 E9PCH4 1651 aa28.26■■■□□ 2.11
UBXN1-208ENST00000527421 KDM5AP29375 1690 aaKnown RBP28.26■■■□□ 2.11
UBXN1-208ENST00000527421 NUP155O75694 1391 aa28.25■■■□□ 2.11
UBXN1-208ENST00000527421 LTBP4Q8N2S1 1624 aa28.23■■■□□ 2.11
UBXN1-208ENST00000527421 HFM1A2PYH4 1435 aa28.22■■■□□ 2.11
UBXN1-208ENST00000527421 MED14O60244 1454 aa28.21■■■□□ 2.11
UBXN1-208ENST00000527421 IQGAP1P46940 1657 aa28.2■■■□□ 2.11
UBXN1-208ENST00000527421 NPHP4O75161 1426 aaPredicted RBP28.2■■■□□ 2.11
UBXN1-208ENST00000527421 SLIT1O75093 1534 aa28.2■■■□□ 2.1
UBXN1-208ENST00000527421 ARHGAP23Q9P227 1491 aa28.2■■■□□ 2.1
UBXN1-208ENST00000527421 ADGRB3O60242 1522 aa28.19■■■□□ 2.1
UBXN1-208ENST00000527421 STAG3Q9UJ98 1225 aa28.19■■■□□ 2.1
UBXN1-208ENST00000527421 DISP3Q9P2K9 1392 aa28.19■■■□□ 2.1
UBXN1-208ENST00000527421 IDI1Q13907 227 aa28.18■■■□□ 2.1
UBXN1-208ENST00000527421 SCAF11Q99590 1463 aaKnown RBP28.17■■■□□ 2.1
UBXN1-208ENST00000527421 SLC52A1Q9NWF4 448 aa28.17■■■□□ 2.1
UBXN1-208ENST00000527421 ZNF335Q9H4Z2 1342 aaPredicted RBP28.17■■■□□ 2.1
UBXN1-208ENST00000527421 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
UBXN1-208ENST00000527421 TMEM2Q9UHN6 1383 aa28.13■■■□□ 2.09
UBXN1-208ENST00000527421 EID1Q9Y6B2 187 aa28.1■■■□□ 2.09
UBXN1-208ENST00000527421 IQSEC2Q5JU85 1478 aa28.09■■■□□ 2.09
UBXN1-208ENST00000527421 MYO5BQ9ULV0 1848 aa28.09■■■□□ 2.09
UBXN1-208ENST00000527421 SOCS7O14512 581 aa28.09■■■□□ 2.09
UBXN1-208ENST00000527421 TXNDC2Q86VQ3 553 aa28.09■■■□□ 2.09
UBXN1-208ENST00000527421 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
UBXN1-208ENST00000527421 LTKP29376 864 aa28.07■■■□□ 2.08
UBXN1-208ENST00000527421 TMEM131LA2VDJ0 1609 aa28.07■■■□□ 2.08
UBXN1-208ENST00000527421 CPS1P31327 1500 aa28.04■■■□□ 2.08
UBXN1-208ENST00000527421 TRIM52Q96A61 297 aa28.02■■■□□ 2.08
UBXN1-208ENST00000527421 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
UBXN1-208ENST00000527421 ZFYVE9O95405 1425 aa27.98■■■□□ 2.07
UBXN1-208ENST00000527421 TRPM2O94759 1503 aa27.97■■■□□ 2.07
UBXN1-208ENST00000527421 RIMS2Q9UQ26 1411 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms