RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 ADGRL2O95490 1459 aa22.08■■□□□ 1.12
NXF1-204ENST00000527064 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
NXF1-204ENST00000527064 RRP7BPQ9NSQ0 103 aa22.05■■□□□ 1.12
NXF1-204ENST00000527064 NCOA1Q15788 1441 aa22.05■■□□□ 1.12
NXF1-204ENST00000527064 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
NXF1-204ENST00000527064 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
NXF1-204ENST00000527064 ZMYM3Q14202 1370 aa22.03■■□□□ 1.12
NXF1-204ENST00000527064 PREX1Q8TCU6 1659 aa22.03■■□□□ 1.12
NXF1-204ENST00000527064 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
NXF1-204ENST00000527064 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
NXF1-204ENST00000527064 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
NXF1-204ENST00000527064 NPATQ14207 1427 aa22.01■■□□□ 1.11
NXF1-204ENST00000527064 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
NXF1-204ENST00000527064 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
NXF1-204ENST00000527064 PRDM15P57071 1507 aaPredicted RBP21.98■■□□□ 1.11
NXF1-204ENST00000527064 MROH1Q8NDA8 1641 aa21.98■■□□□ 1.11
NXF1-204ENST00000527064 ROCK1Q13464 1354 aa21.98■■□□□ 1.11
NXF1-204ENST00000527064 PTPRKQ15262 1439 aa21.97■■□□□ 1.11
NXF1-204ENST00000527064 DEPDC5O75140 1603 aa21.96■■□□□ 1.11
NXF1-204ENST00000527064 ABCC3O15438 1527 aa21.96■■□□□ 1.11
NXF1-204ENST00000527064 SETD1BQ9UPS6 1966 aaKnown RBP21.95■■□□□ 1.1
NXF1-204ENST00000527064 PZPP20742 1482 aa21.94■■□□□ 1.1
NXF1-204ENST00000527064 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
NXF1-204ENST00000527064 KANK1Q14678 1352 aa21.92■■□□□ 1.1
NXF1-204ENST00000527064 ITGAEP38570 1179 aa21.92■■□□□ 1.1
NXF1-204ENST00000527064 CEP152O94986 1710 aa21.89■■□□□ 1.1
NXF1-204ENST00000527064 CAMSAP1Q5T5Y3 1602 aa21.89■■□□□ 1.09
NXF1-204ENST00000527064 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
NXF1-204ENST00000527064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
NXF1-204ENST00000527064 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
NXF1-204ENST00000527064 HSPA2P54652 639 aa21.85■■□□□ 1.09
NXF1-204ENST00000527064 VWDEQ8N2E2 1590 aa21.85■■□□□ 1.09
NXF1-204ENST00000527064 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
NXF1-204ENST00000527064 TNRQ92752 1358 aa21.84■■□□□ 1.09
NXF1-204ENST00000527064 ARHGAP31Q2M1Z3 1444 aa21.83■■□□□ 1.09
NXF1-204ENST00000527064 UNC13BO14795 1591 aa21.82■■□□□ 1.08
NXF1-204ENST00000527064 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
NXF1-204ENST00000527064 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
NXF1-204ENST00000527064 ERVK-7P63135 1459 aa21.8■■□□□ 1.08
NXF1-204ENST00000527064 FBXO31Q5XUX0 539 aaPredicted RBP21.8■■□□□ 1.08
NXF1-204ENST00000527064 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
NXF1-204ENST00000527064 NLRP1Q9C000 1473 aa21.79■■□□□ 1.08
NXF1-204ENST00000527064 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
NXF1-204ENST00000527064 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
NXF1-204ENST00000527064 TET3O43151 1660 aa21.75■■□□□ 1.07
NXF1-204ENST00000527064 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
NXF1-204ENST00000527064 NAIPQ13075 1403 aa21.74■■□□□ 1.07
NXF1-204ENST00000527064 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
NXF1-204ENST00000527064 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
NXF1-204ENST00000527064 RPRD2Q5VT52 1461 aaKnown RBP21.73■■□□□ 1.07
NXF1-204ENST00000527064 STRCQ7RTU9 1775 aa21.71■■□□□ 1.07
NXF1-204ENST00000527064 DMRT2Q9Y5R5 561 aa21.7■■□□□ 1.06
NXF1-204ENST00000527064 NUP155O75694 1391 aa21.7■■□□□ 1.06
NXF1-204ENST00000527064 UGGT1Q9NYU2 1555 aa21.7■■□□□ 1.06
NXF1-204ENST00000527064 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
NXF1-204ENST00000527064 NOS1P29475 1434 aa21.65■■□□□ 1.06
NXF1-204ENST00000527064 PKD2Q13563 968 aa21.65■■□□□ 1.06
NXF1-204ENST00000527064 THEMISQ8N1K5 641 aaPredicted RBP21.65■■□□□ 1.06
NXF1-204ENST00000527064 PTPRTO14522 1441 aa21.64■■□□□ 1.06
NXF1-204ENST00000527064 SYNMO15061 1565 aa21.63■■□□□ 1.05
NXF1-204ENST00000527064 E9PCH4 1651 aa21.63■■□□□ 1.05
NXF1-204ENST00000527064 UBR1Q8IWV7 1749 aa21.61■■□□□ 1.05
NXF1-204ENST00000527064 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
NXF1-204ENST00000527064 KDM5AP29375 1690 aaKnown RBP21.6■■□□□ 1.05
NXF1-204ENST00000527064 PIK3C2BO00750 1634 aa21.6■■□□□ 1.05
NXF1-204ENST00000527064 SLC52A1Q9NWF4 448 aa21.59■■□□□ 1.05
NXF1-204ENST00000527064 NCKAP5LQ9HCH0 1330 aa21.58■■□□□ 1.05
NXF1-204ENST00000527064 ADGRB3O60242 1522 aa21.56■■□□□ 1.04
NXF1-204ENST00000527064 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
NXF1-204ENST00000527064 STAG3Q9UJ98 1225 aa21.56■■□□□ 1.04
NXF1-204ENST00000527064 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
NXF1-204ENST00000527064 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
NXF1-204ENST00000527064 IDI1Q13907 227 aa21.54■■□□□ 1.04
NXF1-204ENST00000527064 SLIT1O75093 1534 aa21.54■■□□□ 1.04
NXF1-204ENST00000527064 NEURL4Q96JN8 1562 aa21.53■■□□□ 1.04
NXF1-204ENST00000527064 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
NXF1-204ENST00000527064 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.04
NXF1-204ENST00000527064 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.03
NXF1-204ENST00000527064 MED14O60244 1454 aa21.51■■□□□ 1.03
NXF1-204ENST00000527064 SCAF11Q99590 1463 aaKnown RBP21.5■■□□□ 1.03
NXF1-204ENST00000527064 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
NXF1-204ENST00000527064 NPHP4O75161 1426 aaPredicted RBP21.49■■□□□ 1.03
NXF1-204ENST00000527064 IQGAP1P46940 1657 aa21.48■■□□□ 1.03
NXF1-204ENST00000527064 EID1Q9Y6B2 187 aa21.48■■□□□ 1.03
NXF1-204ENST00000527064 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
NXF1-204ENST00000527064 TRPM2O94759 1503 aa21.46■■□□□ 1.03
NXF1-204ENST00000527064 TMEM131LA2VDJ0 1609 aa21.46■■□□□ 1.03
NXF1-204ENST00000527064 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
NXF1-204ENST00000527064 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
NXF1-204ENST00000527064 CHGAP10645 457 aaKnown RBP21.41■■□□□ 1.02
NXF1-204ENST00000527064 LTKP29376 864 aa21.41■■□□□ 1.02
NXF1-204ENST00000527064 LTBP4Q8N2S1 1624 aa21.4■■□□□ 1.02
NXF1-204ENST00000527064 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
NXF1-204ENST00000527064 MYO5BQ9ULV0 1848 aa21.4■■□□□ 1.02
NXF1-204ENST00000527064 CERKQ8TCT0 537 aa21.39■■□□□ 1.01
NXF1-204ENST00000527064 CLTCL1P53675 1640 aa21.39■■□□□ 1.01
NXF1-204ENST00000527064 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
NXF1-204ENST00000527064 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
NXF1-204ENST00000527064 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
NXF1-204ENST00000527064 MPHOSPH9Q99550 1183 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms