RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PLXNC1O60486 1568 aa27.92■■■□□ 2.06
SMIM3-201ENST00000526627 MYT1Q01538 1121 aa27.91■■■□□ 2.06
SMIM3-201ENST00000526627 PLA2R1Q13018 1463 aa27.91■■■□□ 2.06
SMIM3-201ENST00000526627 ST20-MTHFSA0A0A6YYL1 179 aa27.89■■■□□ 2.05
SMIM3-201ENST00000526627 PLEKHH2Q8IVE3 1493 aa27.88■■■□□ 2.05
SMIM3-201ENST00000526627 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
SMIM3-201ENST00000526627 TRPM1Q7Z4N2 1603 aa27.86■■■□□ 2.05
SMIM3-201ENST00000526627 IQGAP3Q86VI3 1631 aa27.86■■■□□ 2.05
SMIM3-201ENST00000526627 PRAG1Q86YV5 1406 aa27.86■■■□□ 2.05
SMIM3-201ENST00000526627 ERICH6BQ5W0A0 696 aa27.85■■■□□ 2.05
SMIM3-201ENST00000526627 E9PCH4 1651 aa27.83■■■□□ 2.05
SMIM3-201ENST00000526627 ZCCHC11Q5TAX3 1644 aaKnown RBP27.82■■■□□ 2.04
SMIM3-201ENST00000526627 CNGB1Q14028 1251 aaPredicted RBP27.81■■■□□ 2.04
SMIM3-201ENST00000526627 DUOX2Q9NRD8 1548 aa27.81■■■□□ 2.04
SMIM3-201ENST00000526627 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
SMIM3-201ENST00000526627 MAGI2Q86UL8 1455 aa27.81■■■□□ 2.04
SMIM3-201ENST00000526627 PLCH2O75038 1416 aa27.81■■■□□ 2.04
SMIM3-201ENST00000526627 RBM19Q9Y4C8 960 aaKnown RBP27.8■■■□□ 2.04
SMIM3-201ENST00000526627 A2MP01023 1474 aa27.8■■■□□ 2.04
SMIM3-201ENST00000526627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.04
SMIM3-201ENST00000526627 UHRF1BP1LA0JNW5 1464 aa27.78■■■□□ 2.04
SMIM3-201ENST00000526627 PNISRQ8TF01 805 aaKnown RBP27.76■■■□□ 2.03
SMIM3-201ENST00000526627 GPRASP1Q5JY77 1395 aa27.76■■■□□ 2.03
SMIM3-201ENST00000526627 ERBINQ96RT1 1412 aa27.76■■■□□ 2.03
SMIM3-201ENST00000526627 ATP10AO60312 1499 aa27.75■■■□□ 2.03
SMIM3-201ENST00000526627 SMG6Q86US8 1419 aaKnown RBP27.75■■■□□ 2.03
SMIM3-201ENST00000526627 ABCC1P33527 1531 aa27.74■■■□□ 2.03
SMIM3-201ENST00000526627 PPP4R2Q9NY27 417 aa27.74■■■□□ 2.03
SMIM3-201ENST00000526627 RGL3Q3MIN7 710 aa27.74■■■□□ 2.03
SMIM3-201ENST00000526627 NBPF1Q3BBV0 1214 aa27.73■■■□□ 2.03
SMIM3-201ENST00000526627 LAMC1P11047 1609 aa27.72■■■□□ 2.03
SMIM3-201ENST00000526627 EFCAB2Q5VUJ9 269 aa27.7■■■□□ 2.03
SMIM3-201ENST00000526627 TRAPPC8Q9Y2L5 1435 aa27.7■■■□□ 2.02
SMIM3-201ENST00000526627 KTN1Q86UP2 1357 aaKnown RBP27.69■■■□□ 2.02
SMIM3-201ENST00000526627 PRDM15P57071 1507 aaPredicted RBP27.69■■■□□ 2.02
SMIM3-201ENST00000526627 TMC1Q8TDI8 760 aa27.68■■■□□ 2.02
SMIM3-201ENST00000526627 LRPPRCP42704 1394 aaKnown RBP27.67■■■□□ 2.02
SMIM3-201ENST00000526627 BRD4O60885 1362 aaPredicted RBP27.66■■■□□ 2.02
SMIM3-201ENST00000526627 MYBBP1AQ9BQG0 1328 aaKnown RBP27.66■■■□□ 2.02
SMIM3-201ENST00000526627 RALBP1Q15311 655 aa27.66■■■□□ 2.02
SMIM3-201ENST00000526627 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
SMIM3-201ENST00000526627 EIF2AK4Q9P2K8 1649 aaKnown RBP27.64■■■□□ 2.02
SMIM3-201ENST00000526627 COL17A1Q9UMD9 1497 aaPredicted RBP27.63■■■□□ 2.01
SMIM3-201ENST00000526627 TESK2Q96S53 571 aa27.62■■■□□ 2.01
SMIM3-201ENST00000526627 RNF123Q5XPI4 1314 aa27.61■■■□□ 2.01
SMIM3-201ENST00000526627 PARD3Q8TEW0 1356 aa27.6■■■□□ 2.01
SMIM3-201ENST00000526627 ARAP3Q8WWN8 1544 aa27.6■■■□□ 2.01
SMIM3-201ENST00000526627 PER1O15534 1290 aaPredicted RBP27.59■■■□□ 2.01
SMIM3-201ENST00000526627 DISP3Q9P2K9 1392 aa27.58■■■□□ 2.01
SMIM3-201ENST00000526627 RNF17Q9BXT8 1623 aaKnown RBP27.57■■■□□ 2
SMIM3-201ENST00000526627 RTEL1-TNFRSF6BF6WH68 1400 aa27.57■■■□□ 2
SMIM3-201ENST00000526627 ZFYVE16Q7Z3T8 1539 aa27.57■■■□□ 2
SMIM3-201ENST00000526627 B4GALNT3Q6L9W6 998 aa27.57■■■□□ 2
SMIM3-201ENST00000526627 ANP32EQ9BTT0 268 aa27.57■■■□□ 2
SMIM3-201ENST00000526627 SPAG9O60271 1321 aaKnown RBP27.54■■■□□ 2
SMIM3-201ENST00000526627 SENP3-EIF4A1A0A087X0R7 540 aa27.54■■■□□ 2
SMIM3-201ENST00000526627 AFAP1Q8N556 730 aa27.53■■■□□ 2
SMIM3-201ENST00000526627 NLRP13Q86W25 1043 aa27.51■■□□□ 1.99
SMIM3-201ENST00000526627 DEPDC5O75140 1603 aa27.5■■□□□ 1.99
SMIM3-201ENST00000526627 TRPM2O94759 1503 aa27.5■■□□□ 1.99
SMIM3-201ENST00000526627 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
SMIM3-201ENST00000526627 PTPRTO14522 1441 aa27.47■■□□□ 1.99
SMIM3-201ENST00000526627 WDR7Q9Y4E6 1490 aa27.47■■□□□ 1.99
SMIM3-201ENST00000526627 ABCA9Q8IUA7 1624 aa27.46■■□□□ 1.99
SMIM3-201ENST00000526627 WASHC2CQ9Y4E1 1318 aa27.46■■□□□ 1.99
SMIM3-201ENST00000526627 SPHKAPQ2M3C7 1700 aa27.45■■□□□ 1.99
SMIM3-201ENST00000526627 CEP152O94986 1710 aa27.45■■□□□ 1.98
SMIM3-201ENST00000526627 INO80Q9ULG1 1556 aaPredicted RBP27.44■■□□□ 1.98
SMIM3-201ENST00000526627 TMF1P82094 1093 aa27.44■■□□□ 1.98
SMIM3-201ENST00000526627 PANK3Q9H999 370 aa27.43■■□□□ 1.98
SMIM3-201ENST00000526627 CLTCL1P53675 1640 aa27.43■■□□□ 1.98
SMIM3-201ENST00000526627 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
SMIM3-201ENST00000526627 FANCIQ9NVI1 1328 aa27.42■■□□□ 1.98
SMIM3-201ENST00000526627 VWDEQ8N2E2 1590 aa27.42■■□□□ 1.98
SMIM3-201ENST00000526627 TET3O43151 1660 aa27.42■■□□□ 1.98
SMIM3-201ENST00000526627 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
SMIM3-201ENST00000526627 FANCAO15360 1455 aa27.41■■□□□ 1.98
SMIM3-201ENST00000526627 MSH5O43196 834 aa27.4■■□□□ 1.98
SMIM3-201ENST00000526627 CC2D1BQ5T0F9 858 aaKnown RBP27.38■■□□□ 1.97
SMIM3-201ENST00000526627 SCAPERQ9BY12 1400 aa27.35■■□□□ 1.97
SMIM3-201ENST00000526627 INSRP06213 1382 aa27.34■■□□□ 1.97
SMIM3-201ENST00000526627 MROH1Q8NDA8 1641 aa27.33■■□□□ 1.97
SMIM3-201ENST00000526627 STAC3Q96MF2 364 aa27.33■■□□□ 1.97
SMIM3-201ENST00000526627 ZMYM4Q5VZL5 1548 aa27.32■■□□□ 1.96
SMIM3-201ENST00000526627 ADGRL1O94910 1474 aa27.32■■□□□ 1.96
SMIM3-201ENST00000526627 BLMP54132 1417 aaPredicted RBP27.32■■□□□ 1.96
SMIM3-201ENST00000526627 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
SMIM3-201ENST00000526627 KANK1Q14678 1352 aa27.3■■□□□ 1.96
SMIM3-201ENST00000526627 NEURL4Q96JN8 1562 aa27.29■■□□□ 1.96
SMIM3-201ENST00000526627 PDE3BQ13370 1112 aa27.29■■□□□ 1.96
SMIM3-201ENST00000526627 KIF3BO15066 747 aa27.28■■□□□ 1.96
SMIM3-201ENST00000526627 CCDC136Q96JN2 1154 aa27.27■■□□□ 1.96
SMIM3-201ENST00000526627 SALL2Q9Y467 1007 aaPredicted RBP27.27■■□□□ 1.96
SMIM3-201ENST00000526627 ASXL2Q76L83 1435 aa27.27■■□□□ 1.96
SMIM3-201ENST00000526627 RRP1P56182 461 aaKnown RBP27.26■■□□□ 1.95
SMIM3-201ENST00000526627 KIAA1210Q9ULL0 1709 aa27.26■■□□□ 1.95
SMIM3-201ENST00000526627 SYNMO15061 1565 aa27.24■■□□□ 1.95
SMIM3-201ENST00000526627 RCAN3Q9UKA8 241 aa27.24■■□□□ 1.95
SMIM3-201ENST00000526627 KIDINS220Q9ULH0 1771 aa27.22■■□□□ 1.95
SMIM3-201ENST00000526627 UGGT1Q9NYU2 1555 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms