RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
NDRG1-228ENST00000523931 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.21
NDRG1-228ENST00000523931 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
NDRG1-228ENST00000523931 MED14O60244 1454 aa16.34■□□□□ 0.21
NDRG1-228ENST00000523931 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
NDRG1-228ENST00000523931 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
NDRG1-228ENST00000523931 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
NDRG1-228ENST00000523931 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
NDRG1-228ENST00000523931 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.2
NDRG1-228ENST00000523931 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
NDRG1-228ENST00000523931 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
NDRG1-228ENST00000523931 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
NDRG1-228ENST00000523931 PZPP20742 1482 aa16.29■□□□□ 0.2
NDRG1-228ENST00000523931 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
NDRG1-228ENST00000523931 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
NDRG1-228ENST00000523931 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
NDRG1-228ENST00000523931 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
NDRG1-228ENST00000523931 KIAA1107Q9UPP5 1409 aa16.28■□□□□ 0.2
NDRG1-228ENST00000523931 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
NDRG1-228ENST00000523931 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
NDRG1-228ENST00000523931 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
NDRG1-228ENST00000523931 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
NDRG1-228ENST00000523931 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
NDRG1-228ENST00000523931 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
NDRG1-228ENST00000523931 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
NDRG1-228ENST00000523931 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
NDRG1-228ENST00000523931 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
NDRG1-228ENST00000523931 KIF3BO15066 747 aa16.2■□□□□ 0.18
NDRG1-228ENST00000523931 ZC3H13Q5T200 1668 aaKnown RBP16.19■□□□□ 0.18
NDRG1-228ENST00000523931 DHX29Q7Z478 1369 aaKnown RBP16.19■□□□□ 0.18
NDRG1-228ENST00000523931 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
NDRG1-228ENST00000523931 CCNB3Q8WWL7 1395 aa16.17■□□□□ 0.18
NDRG1-228ENST00000523931 SRCAPQ6ZRS2 3230 aa16.17■□□□□ 0.18
NDRG1-228ENST00000523931 ROBO1Q9Y6N7 1651 aa16.16■□□□□ 0.18
NDRG1-228ENST00000523931 SCAF11Q99590 1463 aaKnown RBP16.15■□□□□ 0.18
NDRG1-228ENST00000523931 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
NDRG1-228ENST00000523931 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
NDRG1-228ENST00000523931 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
NDRG1-228ENST00000523931 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
NDRG1-228ENST00000523931 TMEM94Q12767 1356 aa16.11■□□□□ 0.17
NDRG1-228ENST00000523931 JCADQ9P266 1359 aa16.11■□□□□ 0.17
NDRG1-228ENST00000523931 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
NDRG1-228ENST00000523931 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
NDRG1-228ENST00000523931 PHLPP1O60346 1717 aa16.08■□□□□ 0.17
NDRG1-228ENST00000523931 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.16
NDRG1-228ENST00000523931 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.16
NDRG1-228ENST00000523931 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.16
NDRG1-228ENST00000523931 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.16
NDRG1-228ENST00000523931 LTKP29376 864 aa16.07■□□□□ 0.16
NDRG1-228ENST00000523931 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
NDRG1-228ENST00000523931 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
NDRG1-228ENST00000523931 ABCC3O15438 1527 aa16.04■□□□□ 0.16
NDRG1-228ENST00000523931 SLIT1O75093 1534 aa16.04■□□□□ 0.16
NDRG1-228ENST00000523931 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
NDRG1-228ENST00000523931 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
NDRG1-228ENST00000523931 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
NDRG1-228ENST00000523931 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
NDRG1-228ENST00000523931 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
NDRG1-228ENST00000523931 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
NDRG1-228ENST00000523931 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.16
NDRG1-228ENST00000523931 LRP6O75581 1613 aa16.02■□□□□ 0.16
NDRG1-228ENST00000523931 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
NDRG1-228ENST00000523931 RXRBP28702 533 aa16.02■□□□□ 0.16
NDRG1-228ENST00000523931 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
NDRG1-228ENST00000523931 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
NDRG1-228ENST00000523931 MSH6P52701 1360 aa16■□□□□ 0.15
NDRG1-228ENST00000523931 KCNA6P17658 529 aa16■□□□□ 0.15
NDRG1-228ENST00000523931 SLAIN2Q9P270 581 aa16■□□□□ 0.15
NDRG1-228ENST00000523931 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
NDRG1-228ENST00000523931 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
NDRG1-228ENST00000523931 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
NDRG1-228ENST00000523931 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
NDRG1-228ENST00000523931 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.14
NDRG1-228ENST00000523931 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
NDRG1-228ENST00000523931 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
NDRG1-228ENST00000523931 SLC26A8Q96RN1 970 aa15.94■□□□□ 0.14
NDRG1-228ENST00000523931 CAMSAP2Q08AD1 1489 aa15.94■□□□□ 0.14
NDRG1-228ENST00000523931 CEP152O94986 1710 aa15.94■□□□□ 0.14
NDRG1-228ENST00000523931 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
NDRG1-228ENST00000523931 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
NDRG1-228ENST00000523931 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
NDRG1-228ENST00000523931 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
NDRG1-228ENST00000523931 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
NDRG1-228ENST00000523931 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
NDRG1-228ENST00000523931 SHPRHQ149N8 1683 aa15.91■□□□□ 0.14
NDRG1-228ENST00000523931 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
NDRG1-228ENST00000523931 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
NDRG1-228ENST00000523931 FOXD1Q16676 465 aa15.9■□□□□ 0.14
NDRG1-228ENST00000523931 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
NDRG1-228ENST00000523931 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
NDRG1-228ENST00000523931 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
NDRG1-228ENST00000523931 CEP162Q5TB80 1403 aa15.89■□□□□ 0.13
NDRG1-228ENST00000523931 NUTM2DQ5VT03 806 aaPredicted RBP15.89■□□□□ 0.13
NDRG1-228ENST00000523931 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
NDRG1-228ENST00000523931 AFF2P51816 1311 aa15.89■□□□□ 0.13
NDRG1-228ENST00000523931 RGS12O14924 1447 aa15.88■□□□□ 0.13
NDRG1-228ENST00000523931 TET3O43151 1660 aa15.88■□□□□ 0.13
NDRG1-228ENST00000523931 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
NDRG1-228ENST00000523931 EFCAB6Q5THR3 1501 aa15.88■□□□□ 0.13
NDRG1-228ENST00000523931 ARHGEF5Q12774 1597 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms