RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
NDRG1-228ENST00000523931 ABCC9O60706 1549 aa23.94■■□□□ 1.42
NDRG1-228ENST00000523931 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
NDRG1-228ENST00000523931 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
NDRG1-228ENST00000523931 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
NDRG1-228ENST00000523931 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
NDRG1-228ENST00000523931 NACADO15069 1562 aa22.09■■□□□ 1.13
NDRG1-228ENST00000523931 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
NDRG1-228ENST00000523931 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
NDRG1-228ENST00000523931 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
NDRG1-228ENST00000523931 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
NDRG1-228ENST00000523931 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
NDRG1-228ENST00000523931 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
NDRG1-228ENST00000523931 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
NDRG1-228ENST00000523931 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
NDRG1-228ENST00000523931 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
NDRG1-228ENST00000523931 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
NDRG1-228ENST00000523931 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
NDRG1-228ENST00000523931 CUX2O14529 1486 aa20.94■□□□□ 0.94
NDRG1-228ENST00000523931 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
NDRG1-228ENST00000523931 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
NDRG1-228ENST00000523931 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
NDRG1-228ENST00000523931 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
NDRG1-228ENST00000523931 NESP48681 1621 aa20.33■□□□□ 0.84
NDRG1-228ENST00000523931 THOC2Q8NI27 1593 aaKnown RBP20.27■□□□□ 0.84
NDRG1-228ENST00000523931 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
NDRG1-228ENST00000523931 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
NDRG1-228ENST00000523931 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
NDRG1-228ENST00000523931 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
NDRG1-228ENST00000523931 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
NDRG1-228ENST00000523931 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
NDRG1-228ENST00000523931 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
NDRG1-228ENST00000523931 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
NDRG1-228ENST00000523931 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
NDRG1-228ENST00000523931 MRC2Q9UBG0 1479 aa19.87■□□□□ 0.77
NDRG1-228ENST00000523931 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
NDRG1-228ENST00000523931 WDR62O43379 1518 aa19.82■□□□□ 0.76
NDRG1-228ENST00000523931 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
NDRG1-228ENST00000523931 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
NDRG1-228ENST00000523931 RIMBP3CA6NJZ7 1639 aa19.68■□□□□ 0.74
NDRG1-228ENST00000523931 RIMBP3BA6NNM3 1639 aa19.68■□□□□ 0.74
NDRG1-228ENST00000523931 RIMBP3Q9UFD9 1639 aa19.68■□□□□ 0.74
NDRG1-228ENST00000523931 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
NDRG1-228ENST00000523931 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
NDRG1-228ENST00000523931 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
NDRG1-228ENST00000523931 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
NDRG1-228ENST00000523931 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
NDRG1-228ENST00000523931 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
NDRG1-228ENST00000523931 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
NDRG1-228ENST00000523931 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
NDRG1-228ENST00000523931 CFTRP13569 1480 aa19.35■□□□□ 0.69
NDRG1-228ENST00000523931 WIZO95785 1651 aa19.33■□□□□ 0.68
NDRG1-228ENST00000523931 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
NDRG1-228ENST00000523931 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
NDRG1-228ENST00000523931 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
NDRG1-228ENST00000523931 CHD1O14646 1710 aa19.17■□□□□ 0.66
NDRG1-228ENST00000523931 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
NDRG1-228ENST00000523931 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
NDRG1-228ENST00000523931 FBLN2P98095 1184 aa19.11■□□□□ 0.65
NDRG1-228ENST00000523931 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
NDRG1-228ENST00000523931 TOPBP1Q92547 1522 aa19.08■□□□□ 0.64
NDRG1-228ENST00000523931 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
NDRG1-228ENST00000523931 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.647e-16■■■■□ 24.8
NDRG1-228ENST00000523931 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
NDRG1-228ENST00000523931 TARBP1Q13395 1621 aaKnown RBP18.95■□□□□ 0.62
NDRG1-228ENST00000523931 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
NDRG1-228ENST00000523931 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
NDRG1-228ENST00000523931 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
NDRG1-228ENST00000523931 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
NDRG1-228ENST00000523931 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
NDRG1-228ENST00000523931 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
NDRG1-228ENST00000523931 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
NDRG1-228ENST00000523931 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
NDRG1-228ENST00000523931 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
NDRG1-228ENST00000523931 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
NDRG1-228ENST00000523931 ILDR1Q86SU0 546 aaPredicted RBP18.76■□□□□ 0.59
NDRG1-228ENST00000523931 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
NDRG1-228ENST00000523931 SOGA1O94964 1423 aa18.74■□□□□ 0.59
NDRG1-228ENST00000523931 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
NDRG1-228ENST00000523931 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
NDRG1-228ENST00000523931 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
NDRG1-228ENST00000523931 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
NDRG1-228ENST00000523931 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
NDRG1-228ENST00000523931 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
NDRG1-228ENST00000523931 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
NDRG1-228ENST00000523931 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
NDRG1-228ENST00000523931 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
NDRG1-228ENST00000523931 CUX1P39880 1505 aa18.47■□□□□ 0.55
NDRG1-228ENST00000523931 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
NDRG1-228ENST00000523931 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
NDRG1-228ENST00000523931 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
NDRG1-228ENST00000523931 NUP160Q12769 1436 aa18.38■□□□□ 0.53
NDRG1-228ENST00000523931 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
NDRG1-228ENST00000523931 KDM6BO15054 1643 aa18.38■□□□□ 0.53
NDRG1-228ENST00000523931 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
NDRG1-228ENST00000523931 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
NDRG1-228ENST00000523931 ADAMTS12P58397 1594 aa18.32■□□□□ 0.52
NDRG1-228ENST00000523931 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
NDRG1-228ENST00000523931 NPM1P06748 294 aaKnown RBP eCLIP18.31■□□□□ 0.52
NDRG1-228ENST00000523931 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms