RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
VPS13B-210ENST00000521932 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
VPS13B-210ENST00000521932 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
VPS13B-210ENST00000521932 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
VPS13B-210ENST00000521932 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
VPS13B-210ENST00000521932 GLI2P10070 1586 aa13.09□□□□□ -0.31
VPS13B-210ENST00000521932 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
VPS13B-210ENST00000521932 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
VPS13B-210ENST00000521932 PLCG2P16885 1265 aa13.08□□□□□ -0.32
VPS13B-210ENST00000521932 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
VPS13B-210ENST00000521932 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.32
VPS13B-210ENST00000521932 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
VPS13B-210ENST00000521932 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
VPS13B-210ENST00000521932 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
VPS13B-210ENST00000521932 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
VPS13B-210ENST00000521932 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
VPS13B-210ENST00000521932 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
VPS13B-210ENST00000521932 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
VPS13B-210ENST00000521932 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
VPS13B-210ENST00000521932 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
VPS13B-210ENST00000521932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
VPS13B-210ENST00000521932 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
VPS13B-210ENST00000521932 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
VPS13B-210ENST00000521932 RGL2O15211 777 aa13.03□□□□□ -0.32
VPS13B-210ENST00000521932 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
VPS13B-210ENST00000521932 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
VPS13B-210ENST00000521932 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
VPS13B-210ENST00000521932 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
VPS13B-210ENST00000521932 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
VPS13B-210ENST00000521932 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
VPS13B-210ENST00000521932 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
VPS13B-210ENST00000521932 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
VPS13B-210ENST00000521932 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
VPS13B-210ENST00000521932 EHBP1L1Q8N3D4 1523 aa13.01□□□□□ -0.33
VPS13B-210ENST00000521932 KIF14Q15058 1648 aa13□□□□□ -0.33
VPS13B-210ENST00000521932 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
VPS13B-210ENST00000521932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.334e-7■■■□□ 15.3
VPS13B-210ENST00000521932 PLCH2O75038 1416 aa12.98□□□□□ -0.33
VPS13B-210ENST00000521932 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
VPS13B-210ENST00000521932 TTC37Q6PGP7 1564 aa12.98□□□□□ -0.33
VPS13B-210ENST00000521932 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
VPS13B-210ENST00000521932 NCOA2Q15596 1464 aa12.96□□□□□ -0.34
VPS13B-210ENST00000521932 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
VPS13B-210ENST00000521932 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
VPS13B-210ENST00000521932 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
VPS13B-210ENST00000521932 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
VPS13B-210ENST00000521932 PPRC1Q5VV67 1664 aaKnown RBP12.95□□□□□ -0.34
VPS13B-210ENST00000521932 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
VPS13B-210ENST00000521932 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
VPS13B-210ENST00000521932 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
VPS13B-210ENST00000521932 NEO1Q92859 1461 aa12.92□□□□□ -0.34
VPS13B-210ENST00000521932 TSPOAP1O95153 1857 aa12.92□□□□□ -0.34
VPS13B-210ENST00000521932 FANCAO15360 1455 aa12.91□□□□□ -0.34
VPS13B-210ENST00000521932 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
VPS13B-210ENST00000521932 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
VPS13B-210ENST00000521932 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
VPS13B-210ENST00000521932 CDC42BPBQ9Y5S2 1711 aa12.91□□□□□ -0.34
VPS13B-210ENST00000521932 PREX2Q70Z35 1606 aa12.9□□□□□ -0.34
VPS13B-210ENST00000521932 CDC42BPAQ5VT25 1732 aa12.9□□□□□ -0.34
VPS13B-210ENST00000521932 AKNAQ7Z591 1439 aa12.89□□□□□ -0.35
VPS13B-210ENST00000521932 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
VPS13B-210ENST00000521932 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
VPS13B-210ENST00000521932 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
VPS13B-210ENST00000521932 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
VPS13B-210ENST00000521932 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
VPS13B-210ENST00000521932 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
VPS13B-210ENST00000521932 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
VPS13B-210ENST00000521932 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
VPS13B-210ENST00000521932 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
VPS13B-210ENST00000521932 STK25O00506 426 aa12.85□□□□□ -0.35
VPS13B-210ENST00000521932 LCE2DQ5TA82 110 aaPredicted RBP12.85□□□□□ -0.35
VPS13B-210ENST00000521932 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
VPS13B-210ENST00000521932 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
VPS13B-210ENST00000521932 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
VPS13B-210ENST00000521932 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
VPS13B-210ENST00000521932 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
VPS13B-210ENST00000521932 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
VPS13B-210ENST00000521932 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
VPS13B-210ENST00000521932 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
VPS13B-210ENST00000521932 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
VPS13B-210ENST00000521932 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 SOX12O15370 315 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
VPS13B-210ENST00000521932 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
VPS13B-210ENST00000521932 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
VPS13B-210ENST00000521932 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.367e-7■■■■□ 23.6
VPS13B-210ENST00000521932 ABCC1P33527 1531 aa12.81□□□□□ -0.36
VPS13B-210ENST00000521932 KDM6BO15054 1643 aa12.8□□□□□ -0.36
VPS13B-210ENST00000521932 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
VPS13B-210ENST00000521932 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
VPS13B-210ENST00000521932 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
VPS13B-210ENST00000521932 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
VPS13B-210ENST00000521932 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
VPS13B-210ENST00000521932 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
VPS13B-210ENST00000521932 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
VPS13B-210ENST00000521932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS13B-210ENST00000521932 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms