RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 PLXNC1O60486 1568 aa9.6□□□□□ -0.87
IGHV3-57-201ENST00000520143 ANKRD50Q9ULJ7 1429 aa9.6□□□□□ -0.87
IGHV3-57-201ENST00000520143 HNRNPMP52272 730 aaKnown RBP eCLIP9.6□□□□□ -0.87
IGHV3-57-201ENST00000520143 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
IGHV3-57-201ENST00000520143 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
IGHV3-57-201ENST00000520143 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
IGHV3-57-201ENST00000520143 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
IGHV3-57-201ENST00000520143 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
IGHV3-57-201ENST00000520143 ABCC1P33527 1531 aa9.59□□□□□ -0.87
IGHV3-57-201ENST00000520143 KDM5DQ9BY66 1539 aa9.59□□□□□ -0.87
IGHV3-57-201ENST00000520143 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
IGHV3-57-201ENST00000520143 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
IGHV3-57-201ENST00000520143 PZPP20742 1482 aa9.58□□□□□ -0.88
IGHV3-57-201ENST00000520143 ASXL2Q76L83 1435 aa9.57□□□□□ -0.88
IGHV3-57-201ENST00000520143 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
IGHV3-57-201ENST00000520143 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
IGHV3-57-201ENST00000520143 KIF15Q9NS87 1388 aa9.57□□□□□ -0.88
IGHV3-57-201ENST00000520143 ANKRD30BQ9BXX2 1392 aa9.56□□□□□ -0.88
IGHV3-57-201ENST00000520143 ARHGEF12Q9NZN5 1544 aa9.56□□□□□ -0.88
IGHV3-57-201ENST00000520143 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
IGHV3-57-201ENST00000520143 UNC13BO14795 1591 aa9.54□□□□□ -0.88
IGHV3-57-201ENST00000520143 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
IGHV3-57-201ENST00000520143 RTEL1-TNFRSF6BF6WH68 1400 aa9.54□□□□□ -0.88
IGHV3-57-201ENST00000520143 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
IGHV3-57-201ENST00000520143 RPRD2Q5VT52 1461 aaKnown RBP9.53□□□□□ -0.88
IGHV3-57-201ENST00000520143 FANCAO15360 1455 aa9.53□□□□□ -0.88
IGHV3-57-201ENST00000520143 ERBINQ96RT1 1412 aa9.52□□□□□ -0.89
IGHV3-57-201ENST00000520143 NUP155O75694 1391 aa9.51□□□□□ -0.89
IGHV3-57-201ENST00000520143 TRAPPC8Q9Y2L5 1435 aa9.51□□□□□ -0.89
IGHV3-57-201ENST00000520143 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
IGHV3-57-201ENST00000520143 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
IGHV3-57-201ENST00000520143 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
IGHV3-57-201ENST00000520143 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 FKBP8Q14318 412 aa9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
IGHV3-57-201ENST00000520143 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
IGHV3-57-201ENST00000520143 PKD2Q13563 968 aa9.49□□□□□ -0.89
IGHV3-57-201ENST00000520143 FAM135AQ9P2D6 1515 aa9.49□□□□□ -0.89
IGHV3-57-201ENST00000520143 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
IGHV3-57-201ENST00000520143 TEX14Q8IWB6 1497 aa9.48□□□□□ -0.89
IGHV3-57-201ENST00000520143 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
IGHV3-57-201ENST00000520143 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
IGHV3-57-201ENST00000520143 CD109Q6YHK3 1445 aa9.48□□□□□ -0.89
IGHV3-57-201ENST00000520143 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
IGHV3-57-201ENST00000520143 GLI2P10070 1586 aa9.47□□□□□ -0.89
IGHV3-57-201ENST00000520143 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
IGHV3-57-201ENST00000520143 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
IGHV3-57-201ENST00000520143 PROM2Q8N271 834 aa9.47□□□□□ -0.89
IGHV3-57-201ENST00000520143 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
IGHV3-57-201ENST00000520143 NEO1Q92859 1461 aa9.46□□□□□ -0.9
IGHV3-57-201ENST00000520143 MAP3K4Q9Y6R4 1608 aa9.45□□□□□ -0.9
IGHV3-57-201ENST00000520143 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
IGHV3-57-201ENST00000520143 AFAP1Q8N556 730 aa9.45□□□□□ -0.9
IGHV3-57-201ENST00000520143 ZNF518AQ6AHZ1 1483 aa9.45□□□□□ -0.9
IGHV3-57-201ENST00000520143 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
IGHV3-57-201ENST00000520143 ATP10AO60312 1499 aa9.44□□□□□ -0.9
IGHV3-57-201ENST00000520143 KDM5CP41229 1560 aa9.44□□□□□ -0.9
IGHV3-57-201ENST00000520143 MLH3Q9UHC1 1453 aa9.42□□□□□ -0.9
IGHV3-57-201ENST00000520143 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
IGHV3-57-201ENST00000520143 CYB5RLQ6IPT4 315 aa9.42□□□□□ -0.9
IGHV3-57-201ENST00000520143 TET3O43151 1660 aa9.42□□□□□ -0.9
IGHV3-57-201ENST00000520143 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
IGHV3-57-201ENST00000520143 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
IGHV3-57-201ENST00000520143 POGZQ7Z3K3 1410 aa9.41□□□□□ -0.9
IGHV3-57-201ENST00000520143 BCORL1Q5H9F3 1711 aa9.41□□□□□ -0.9
IGHV3-57-201ENST00000520143 UHRF1BP1Q6BDS2 1440 aa9.4□□□□□ -0.9
IGHV3-57-201ENST00000520143 POLR1AO95602 1720 aaPredicted RBP9.4□□□□□ -0.9
IGHV3-57-201ENST00000520143 E9PCH4 1651 aa9.4□□□□□ -0.9
IGHV3-57-201ENST00000520143 MIER1Q8N108 512 aa9.4□□□□□ -0.9
IGHV3-57-201ENST00000520143 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
IGHV3-57-201ENST00000520143 PRDM15P57071 1507 aaPredicted RBP9.4□□□□□ -0.91
IGHV3-57-201ENST00000520143 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 KANK1Q14678 1352 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 NBPF8Q3BBV2 869 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
IGHV3-57-201ENST00000520143 MROH1Q8NDA8 1641 aa9.38□□□□□ -0.91
IGHV3-57-201ENST00000520143 A2MP01023 1474 aa9.38□□□□□ -0.91
IGHV3-57-201ENST00000520143 CEP152O94986 1710 aa9.37□□□□□ -0.91
IGHV3-57-201ENST00000520143 HAX1O00165 279 aa9.37□□□□□ -0.91
IGHV3-57-201ENST00000520143 MYT1LQ9UL68 1186 aa9.37□□□□□ -0.91
IGHV3-57-201ENST00000520143 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
IGHV3-57-201ENST00000520143 TRPM2O94759 1503 aa9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 LMTK2Q8IWU2 1503 aa9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 PTPRTO14522 1441 aa9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
IGHV3-57-201ENST00000520143 KIF3BO15066 747 aa9.35□□□□□ -0.91
IGHV3-57-201ENST00000520143 FRMPD1Q5SYB0 1578 aa9.35□□□□□ -0.91
IGHV3-57-201ENST00000520143 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
IGHV3-57-201ENST00000520143 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
IGHV3-57-201ENST00000520143 DIP2CQ9Y2E4 1556 aa9.34□□□□□ -0.91
IGHV3-57-201ENST00000520143 KIF13AQ9H1H9 1805 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms