RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.349e-8■□□□□ 8.7
PABPC1-214ENST00000520142 KIF15Q9NS87 1388 aa17.17■□□□□ 0.34
PABPC1-214ENST00000520142 MROH1Q8NDA8 1641 aa17.17■□□□□ 0.34
PABPC1-214ENST00000520142 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
PABPC1-214ENST00000520142 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
PABPC1-214ENST00000520142 NPATQ14207 1427 aa17.15■□□□□ 0.34
PABPC1-214ENST00000520142 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
PABPC1-214ENST00000520142 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
PABPC1-214ENST00000520142 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
PABPC1-214ENST00000520142 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
PABPC1-214ENST00000520142 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
PABPC1-214ENST00000520142 KDM5DQ9BY66 1539 aa17.14■□□□□ 0.33
PABPC1-214ENST00000520142 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
PABPC1-214ENST00000520142 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
PABPC1-214ENST00000520142 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
PABPC1-214ENST00000520142 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
PABPC1-214ENST00000520142 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
PABPC1-214ENST00000520142 ABCC3O15438 1527 aa17.1■□□□□ 0.33
PABPC1-214ENST00000520142 PRDM15P57071 1507 aaPredicted RBP17.1■□□□□ 0.33
PABPC1-214ENST00000520142 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
PABPC1-214ENST00000520142 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
PABPC1-214ENST00000520142 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
PABPC1-214ENST00000520142 PZPP20742 1482 aa17.08■□□□□ 0.32
PABPC1-214ENST00000520142 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
PABPC1-214ENST00000520142 HSPA2P54652 639 aa17.08■□□□□ 0.32
PABPC1-214ENST00000520142 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
PABPC1-214ENST00000520142 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
PABPC1-214ENST00000520142 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-214ENST00000520142 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
PABPC1-214ENST00000520142 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
PABPC1-214ENST00000520142 ZNF142P52746 1687 aaPredicted RBP17.02■□□□□ 0.32
PABPC1-214ENST00000520142 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
PABPC1-214ENST00000520142 CEP152O94986 1710 aa17.01■□□□□ 0.31
PABPC1-214ENST00000520142 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
PABPC1-214ENST00000520142 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
PABPC1-214ENST00000520142 STRCQ7RTU9 1775 aa17■□□□□ 0.31
PABPC1-214ENST00000520142 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
PABPC1-214ENST00000520142 TNRQ92752 1358 aa16.99■□□□□ 0.31
PABPC1-214ENST00000520142 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
PABPC1-214ENST00000520142 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
PABPC1-214ENST00000520142 UNC13BO14795 1591 aa16.97■□□□□ 0.31
PABPC1-214ENST00000520142 ITGAEP38570 1179 aa16.96■□□□□ 0.31
PABPC1-214ENST00000520142 KANK1Q14678 1352 aa16.96■□□□□ 0.31
PABPC1-214ENST00000520142 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
PABPC1-214ENST00000520142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
PABPC1-214ENST00000520142 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
PABPC1-214ENST00000520142 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
PABPC1-214ENST00000520142 NAIPQ13075 1403 aa16.92■□□□□ 0.3
PABPC1-214ENST00000520142 PTPRTO14522 1441 aa16.91■□□□□ 0.3
PABPC1-214ENST00000520142 NOS1P29475 1434 aa16.9■□□□□ 0.3
PABPC1-214ENST00000520142 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.29
PABPC1-214ENST00000520142 TET3O43151 1660 aa16.89■□□□□ 0.29
PABPC1-214ENST00000520142 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
PABPC1-214ENST00000520142 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
PABPC1-214ENST00000520142 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
PABPC1-214ENST00000520142 UGGT1Q9NYU2 1555 aa16.88■□□□□ 0.29
PABPC1-214ENST00000520142 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
PABPC1-214ENST00000520142 SYNMO15061 1565 aa16.87■□□□□ 0.29
PABPC1-214ENST00000520142 PKD2Q13563 968 aa16.86■□□□□ 0.29
PABPC1-214ENST00000520142 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
PABPC1-214ENST00000520142 NCKAP5LQ9HCH0 1330 aa16.85■□□□□ 0.29
PABPC1-214ENST00000520142 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
PABPC1-214ENST00000520142 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-214ENST00000520142 NUP155O75694 1391 aa16.84■□□□□ 0.29
PABPC1-214ENST00000520142 NEURL4Q96JN8 1562 aa16.84■□□□□ 0.29
PABPC1-214ENST00000520142 E9PCH4 1651 aa16.83■□□□□ 0.28
PABPC1-214ENST00000520142 IDI1Q13907 227 aa16.82■□□□□ 0.28
PABPC1-214ENST00000520142 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
PABPC1-214ENST00000520142 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
PABPC1-214ENST00000520142 ARHGAP23Q9P227 1491 aa16.81■□□□□ 0.28
PABPC1-214ENST00000520142 SLIT1O75093 1534 aa16.8■□□□□ 0.28
PABPC1-214ENST00000520142 MED14O60244 1454 aa16.8■□□□□ 0.28
PABPC1-214ENST00000520142 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-214ENST00000520142 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
PABPC1-214ENST00000520142 ANKLE2Q86XL3 938 aa16.78■□□□□ 0.28
PABPC1-214ENST00000520142 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
PABPC1-214ENST00000520142 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
PABPC1-214ENST00000520142 SOCS7O14512 581 aa16.75■□□□□ 0.27
PABPC1-214ENST00000520142 TMEM2Q9UHN6 1383 aa16.75■□□□□ 0.27
PABPC1-214ENST00000520142 LTKP29376 864 aa16.74■□□□□ 0.27
PABPC1-214ENST00000520142 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-214ENST00000520142 TMEM131LA2VDJ0 1609 aa16.73■□□□□ 0.27
PABPC1-214ENST00000520142 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
PABPC1-214ENST00000520142 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
PABPC1-214ENST00000520142 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-214ENST00000520142 IQGAP1P46940 1657 aa16.7■□□□□ 0.26
PABPC1-214ENST00000520142 DISP3Q9P2K9 1392 aa16.7■□□□□ 0.26
PABPC1-214ENST00000520142 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
PABPC1-214ENST00000520142 ILDR2Q71H61 639 aa16.69■□□□□ 0.26
PABPC1-214ENST00000520142 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
PABPC1-214ENST00000520142 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-214ENST00000520142 SPHKAPQ2M3C7 1700 aa16.69■□□□□ 0.26
PABPC1-214ENST00000520142 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
PABPC1-214ENST00000520142 TRPM2O94759 1503 aa16.67■□□□□ 0.26
PABPC1-214ENST00000520142 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
PABPC1-214ENST00000520142 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
PABPC1-214ENST00000520142 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
PABPC1-214ENST00000520142 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
PABPC1-214ENST00000520142 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
PABPC1-214ENST00000520142 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms