RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 ZMYM3Q14202 1370 aa22.48■■□□□ 1.19
SH3PXD2B-203ENST00000519643 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
SH3PXD2B-203ENST00000519643 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
SH3PXD2B-203ENST00000519643 PLEKHH2Q8IVE3 1493 aa22.46■■□□□ 1.19
SH3PXD2B-203ENST00000519643 GCC2Q8IWJ2 1684 aa22.45■■□□□ 1.18
SH3PXD2B-203ENST00000519643 PLXNC1O60486 1568 aa22.45■■□□□ 1.18
SH3PXD2B-203ENST00000519643 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 NAIPQ13075 1403 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ADGBQ8N7X0 1667 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ATP7AQ04656 1500 aa22.44■■□□□ 1.18
SH3PXD2B-203ENST00000519643 NCKAP5LQ9HCH0 1330 aa22.43■■□□□ 1.18
SH3PXD2B-203ENST00000519643 INO80Q9ULG1 1556 aaPredicted RBP22.43■■□□□ 1.18
SH3PXD2B-203ENST00000519643 SHANK2Q9UPX8 1470 aa22.43■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
SH3PXD2B-203ENST00000519643 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
SH3PXD2B-203ENST00000519643 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
SH3PXD2B-203ENST00000519643 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
SH3PXD2B-203ENST00000519643 KIAA1107Q9UPP5 1409 aa22.42■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
SH3PXD2B-203ENST00000519643 ADGRL2O95490 1459 aa22.4■■□□□ 1.18
SH3PXD2B-203ENST00000519643 CCDC141Q6ZP82 1450 aa22.4■■□□□ 1.18
SH3PXD2B-203ENST00000519643 PLA2R1Q13018 1463 aa22.4■■□□□ 1.18
SH3PXD2B-203ENST00000519643 A2MP01023 1474 aa22.39■■□□□ 1.17
SH3PXD2B-203ENST00000519643 RRP7BPQ9NSQ0 103 aa22.38■■□□□ 1.17
SH3PXD2B-203ENST00000519643 CEP170BQ9Y4F5 1589 aaPredicted RBP22.38■■□□□ 1.17
SH3PXD2B-203ENST00000519643 ZEB1P37275 1124 aaPredicted RBP22.38■■□□□ 1.17
SH3PXD2B-203ENST00000519643 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
SH3PXD2B-203ENST00000519643 DHX57Q6P158 1386 aaKnown RBP22.36■■□□□ 1.17
SH3PXD2B-203ENST00000519643 MAST1Q9Y2H9 1570 aa22.34■■□□□ 1.17
SH3PXD2B-203ENST00000519643 PKD2Q13563 968 aa22.34■■□□□ 1.17
SH3PXD2B-203ENST00000519643 ANKRD30AQ9BXX3 1397 aa22.33■■□□□ 1.17
SH3PXD2B-203ENST00000519643 UBAP1LF5GYI3 381 aa22.33■■□□□ 1.17
SH3PXD2B-203ENST00000519643 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
SH3PXD2B-203ENST00000519643 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
SH3PXD2B-203ENST00000519643 GGT6Q6P531 493 aa22.31■■□□□ 1.16
SH3PXD2B-203ENST00000519643 A2ML1A8K2U0 1454 aa22.27■■□□□ 1.16
SH3PXD2B-203ENST00000519643 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
SH3PXD2B-203ENST00000519643 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
SH3PXD2B-203ENST00000519643 NEURL4Q96JN8 1562 aa22.23■■□□□ 1.15
SH3PXD2B-203ENST00000519643 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
SH3PXD2B-203ENST00000519643 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
SH3PXD2B-203ENST00000519643 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
SH3PXD2B-203ENST00000519643 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
SH3PXD2B-203ENST00000519643 DHX29Q7Z478 1369 aaKnown RBP22.19■■□□□ 1.14
SH3PXD2B-203ENST00000519643 POLR1AO95602 1720 aaPredicted RBP22.19■■□□□ 1.14
SH3PXD2B-203ENST00000519643 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
SH3PXD2B-203ENST00000519643 TNRQ92752 1358 aa22.17■■□□□ 1.14
SH3PXD2B-203ENST00000519643 HSPA1LP34931 641 aa22.16■■□□□ 1.14
SH3PXD2B-203ENST00000519643 PZPP20742 1482 aa22.15■■□□□ 1.14
SH3PXD2B-203ENST00000519643 CPS1P31327 1500 aa22.15■■□□□ 1.14
SH3PXD2B-203ENST00000519643 TRIM52Q96A61 297 aa22.14■■□□□ 1.14
SH3PXD2B-203ENST00000519643 MED1Q15648 1581 aaPredicted RBP22.14■■□□□ 1.13
SH3PXD2B-203ENST00000519643 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
SH3PXD2B-203ENST00000519643 DUOX2Q9NRD8 1548 aa22.13■■□□□ 1.13
SH3PXD2B-203ENST00000519643 FAM135AQ9P2D6 1515 aa22.13■■□□□ 1.13
SH3PXD2B-203ENST00000519643 KIF3BO15066 747 aa22.12■■□□□ 1.13
SH3PXD2B-203ENST00000519643 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
SH3PXD2B-203ENST00000519643 ALKQ9UM73 1620 aa22.1■■□□□ 1.13
SH3PXD2B-203ENST00000519643 PIP4K2BP78356 416 aa22.1■■□□□ 1.13
SH3PXD2B-203ENST00000519643 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
SH3PXD2B-203ENST00000519643 ERBINQ96RT1 1412 aa22.08■■□□□ 1.12
SH3PXD2B-203ENST00000519643 TOM1O60784 492 aa22.07■■□□□ 1.12
SH3PXD2B-203ENST00000519643 MED14O60244 1454 aa22.06■■□□□ 1.12
SH3PXD2B-203ENST00000519643 MPHOSPH9Q99550 1183 aa22.05■■□□□ 1.12
SH3PXD2B-203ENST00000519643 NLRP1Q9C000 1473 aa22.05■■□□□ 1.12
SH3PXD2B-203ENST00000519643 WASHC2CQ9Y4E1 1318 aa22.05■■□□□ 1.12
SH3PXD2B-203ENST00000519643 UNC13BO14795 1591 aa22.05■■□□□ 1.12
SH3PXD2B-203ENST00000519643 DEPDC5O75140 1603 aa22.04■■□□□ 1.12
SH3PXD2B-203ENST00000519643 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
SH3PXD2B-203ENST00000519643 ANKLE2Q86XL3 938 aa22.04■■□□□ 1.12
SH3PXD2B-203ENST00000519643 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
SH3PXD2B-203ENST00000519643 THEMISQ8N1K5 641 aaPredicted RBP22.01■■□□□ 1.11
SH3PXD2B-203ENST00000519643 NUP155O75694 1391 aa22■■□□□ 1.11
SH3PXD2B-203ENST00000519643 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
SH3PXD2B-203ENST00000519643 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
SH3PXD2B-203ENST00000519643 IQGAP1P46940 1657 aa21.99■■□□□ 1.11
SH3PXD2B-203ENST00000519643 RNF17Q9BXT8 1623 aaKnown RBP21.98■■□□□ 1.11
SH3PXD2B-203ENST00000519643 EIF2AK4Q9P2K8 1649 aaKnown RBP21.98■■□□□ 1.11
SH3PXD2B-203ENST00000519643 ABCC3O15438 1527 aa21.98■■□□□ 1.11
SH3PXD2B-203ENST00000519643 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
SH3PXD2B-203ENST00000519643 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
SH3PXD2B-203ENST00000519643 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
SH3PXD2B-203ENST00000519643 ERVK-7P63135 1459 aa21.93■■□□□ 1.1
SH3PXD2B-203ENST00000519643 MROH1Q8NDA8 1641 aa21.93■■□□□ 1.1
SH3PXD2B-203ENST00000519643 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
SH3PXD2B-203ENST00000519643 SYNMO15061 1565 aa21.91■■□□□ 1.1
SH3PXD2B-203ENST00000519643 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
SH3PXD2B-203ENST00000519643 ANKRD30BQ9BXX2 1392 aa21.91■■□□□ 1.1
SH3PXD2B-203ENST00000519643 FOXD1Q16676 465 aa21.9■■□□□ 1.1
SH3PXD2B-203ENST00000519643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.89■■□□□ 1.1
SH3PXD2B-203ENST00000519643 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
SH3PXD2B-203ENST00000519643 TIMELESSQ9UNS1 1208 aa21.87■■□□□ 1.09
SH3PXD2B-203ENST00000519643 UBR1Q8IWV7 1749 aa21.87■■□□□ 1.09
SH3PXD2B-203ENST00000519643 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
SH3PXD2B-203ENST00000519643 PRDM15P57071 1507 aaPredicted RBP21.85■■□□□ 1.09
SH3PXD2B-203ENST00000519643 CEP152O94986 1710 aa21.85■■□□□ 1.09
SH3PXD2B-203ENST00000519643 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms