RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
PCM1-212ENST00000519253 AAMPQ13685 434 aa10.79□□□□□ -0.68
PCM1-212ENST00000519253 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
PCM1-212ENST00000519253 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
PCM1-212ENST00000519253 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
PCM1-212ENST00000519253 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
PCM1-212ENST00000519253 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
PCM1-212ENST00000519253 HSP90AA2PQ14568 343 aaPredicted RBP10.78□□□□□ -0.68
PCM1-212ENST00000519253 MORC1Q86VD1 984 aa10.78□□□□□ -0.68
PCM1-212ENST00000519253 KIAA1107Q9UPP5 1409 aa10.77□□□□□ -0.68
PCM1-212ENST00000519253 CASC1Q6TDU7 716 aa10.77□□□□□ -0.69
PCM1-212ENST00000519253 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.69
PCM1-212ENST00000519253 TNNT2P45379 298 aaPredicted RBP10.77□□□□□ -0.69
PCM1-212ENST00000519253 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
PCM1-212ENST00000519253 FRAT2O75474 233 aaPredicted RBP10.76□□□□□ -0.69
PCM1-212ENST00000519253 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
PCM1-212ENST00000519253 ANKRD50Q9ULJ7 1429 aa10.76□□□□□ -0.69
PCM1-212ENST00000519253 IPO8O15397 1037 aaKnown RBP10.76□□□□□ -0.69
PCM1-212ENST00000519253 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
PCM1-212ENST00000519253 RPRD2Q5VT52 1461 aaKnown RBP10.75□□□□□ -0.69
PCM1-212ENST00000519253 CHMP5Q9NZZ3 219 aa10.75□□□□□ -0.69
PCM1-212ENST00000519253 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
PCM1-212ENST00000519253 SUPT6HQ7KZ85 1726 aaKnown RBP10.74□□□□□ -0.69
PCM1-212ENST00000519253 BICRAQ9NZM4 1560 aa10.74□□□□□ -0.69
PCM1-212ENST00000519253 SKOR2Q2VWA4 1001 aaPredicted RBP10.73□□□□□ -0.69
PCM1-212ENST00000519253 APAF1O14727 1248 aa10.73□□□□□ -0.69
PCM1-212ENST00000519253 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
PCM1-212ENST00000519253 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
PCM1-212ENST00000519253 DAPK1P53355 1430 aa10.72□□□□□ -0.69
PCM1-212ENST00000519253 HNRNPMP52272 730 aaKnown RBP eCLIP10.72□□□□□ -0.697e-7■■■■□ 20.8
PCM1-212ENST00000519253 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
PCM1-212ENST00000519253 DNTTIP2Q5QJE6 756 aaKnown RBP10.72□□□□□ -0.69
PCM1-212ENST00000519253 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
PCM1-212ENST00000519253 KANK1Q14678 1352 aa10.71□□□□□ -0.69
PCM1-212ENST00000519253 MRE11P49959 708 aa10.71□□□□□ -0.7
PCM1-212ENST00000519253 STAC3Q96MF2 364 aa10.71□□□□□ -0.7
PCM1-212ENST00000519253 PDE3AQ14432 1141 aa10.71□□□□□ -0.7
PCM1-212ENST00000519253 ABCA10Q8WWZ4 1543 aa10.7□□□□□ -0.7
PCM1-212ENST00000519253 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
PCM1-212ENST00000519253 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
PCM1-212ENST00000519253 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
PCM1-212ENST00000519253 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
PCM1-212ENST00000519253 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
PCM1-212ENST00000519253 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■■■□ 23.1
PCM1-212ENST00000519253 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
PCM1-212ENST00000519253 POLA1P09884 1462 aaPredicted RBP10.69□□□□□ -0.7
PCM1-212ENST00000519253 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
PCM1-212ENST00000519253 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
PCM1-212ENST00000519253 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
PCM1-212ENST00000519253 NINLQ9Y2I6 1382 aa10.68□□□□□ -0.7
PCM1-212ENST00000519253 HECW1Q76N89 1606 aa10.67□□□□□ -0.7
PCM1-212ENST00000519253 PPP2R1AP30153 589 aa10.67□□□□□ -0.7
PCM1-212ENST00000519253 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
PCM1-212ENST00000519253 TOPBP1Q92547 1522 aa10.66□□□□□ -0.7
PCM1-212ENST00000519253 EPRSP07814 1512 aaKnown RBP10.66□□□□□ -0.7
PCM1-212ENST00000519253 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
PCM1-212ENST00000519253 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
PCM1-212ENST00000519253 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
PCM1-212ENST00000519253 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.71
PCM1-212ENST00000519253 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
PCM1-212ENST00000519253 ABCC5O15440 1437 aa10.64□□□□□ -0.71
PCM1-212ENST00000519253 TRAK2O60296 914 aa10.64□□□□□ -0.71
PCM1-212ENST00000519253 DDX19BQ9UMR2 479 aa10.64□□□□□ -0.71
PCM1-212ENST00000519253 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
PCM1-212ENST00000519253 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
PCM1-212ENST00000519253 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
PCM1-212ENST00000519253 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
PCM1-212ENST00000519253 CUL7Q14999 1698 aa10.63□□□□□ -0.71
PCM1-212ENST00000519253 UBE2Q2Q8WVN8 375 aa10.63□□□□□ -0.71
PCM1-212ENST00000519253 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
PCM1-212ENST00000519253 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
PCM1-212ENST00000519253 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
PCM1-212ENST00000519253 NBPF1Q3BBV0 1214 aa10.62□□□□□ -0.71
PCM1-212ENST00000519253 SYAP1Q96A49 352 aaPredicted RBP10.62□□□□□ -0.71
PCM1-212ENST00000519253 RUNDC1Q96C34 613 aa10.62□□□□□ -0.71
PCM1-212ENST00000519253 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
PCM1-212ENST00000519253 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
PCM1-212ENST00000519253 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
PCM1-212ENST00000519253 RRP7AQ9Y3A4 280 aaKnown RBP10.62□□□□□ -0.71
PCM1-212ENST00000519253 DHX29Q7Z478 1369 aaKnown RBP10.62□□□□□ -0.71
PCM1-212ENST00000519253 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
PCM1-212ENST00000519253 MCCP23508 829 aa10.61□□□□□ -0.71
PCM1-212ENST00000519253 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCM1-212ENST00000519253 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
PCM1-212ENST00000519253 CC2D2AQ9P2K1 1620 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 MCM4P33991 863 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 POGKQ9P215 609 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 TPM2P07951 284 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 GRIN2BQ13224 1484 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 TCOF1Q13428 1488 aaKnown RBP10.6□□□□□ -0.71
PCM1-212ENST00000519253 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 ERBINQ96RT1 1412 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
PCM1-212ENST00000519253 BCAR3O75815 825 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 C9orf84Q5VXU9 1444 aa10.6□□□□□ -0.71
PCM1-212ENST00000519253 LRPPRCP42704 1394 aaKnown RBP10.59□□□□□ -0.71
PCM1-212ENST00000519253 ST18O60284 1047 aa10.59□□□□□ -0.71
PCM1-212ENST00000519253 MAP7D2Q96T17 732 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms