RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	DUOX2	Q9NRD8	1548 aa		37.34	■■■■□ 3.57
CNOT7-204	ENST00000518885	EIF2AK4	Q9P2K8	1649 aa	Known RBP	37.33	■■■■□ 3.57
CNOT7-204	ENST00000518885	WASHC2C	Q9Y4E1	1318 aa		37.33	■■■■□ 3.57
CNOT7-204	ENST00000518885	KIF15	Q9NS87	1388 aa		37.29	■■■■□ 3.56
CNOT7-204	ENST00000518885	RNF17	Q9BXT8	1623 aa	Known RBP	37.26	■■■■□ 3.56
CNOT7-204	ENST00000518885	FAM50A	Q14320	339 aa	Known RBP	37.26	■■■■□ 3.56
CNOT7-204	ENST00000518885	ANKRD30A	Q9BXX3	1397 aa		37.26	■■■■□ 3.55
CNOT7-204	ENST00000518885	PTPRK	Q15262	1439 aa		37.26	■■■■□ 3.55
CNOT7-204	ENST00000518885	ERBIN	Q96RT1	1412 aa		37.24	■■■■□ 3.55
CNOT7-204	ENST00000518885	DMRT2	Q9Y5R5	561 aa		37.23	■■■■□ 3.55
CNOT7-204	ENST00000518885	RRP7BP	Q9NSQ0	103 aa		37.22	■■■■□ 3.55
CNOT7-204	ENST00000518885	ZC3H13	Q5T200	1668 aa	Known RBP	37.19	■■■■□ 3.54
CNOT7-204	ENST00000518885	PZP	P20742	1482 aa		37.18	■■■■□ 3.54
CNOT7-204	ENST00000518885	CHIC2	Q9UKJ5	165 aa		37.15	■■■■□ 3.54
CNOT7-204	ENST00000518885	MYO3A	Q8NEV4	1616 aa		37.14	■■■■□ 3.54
CNOT7-204	ENST00000518885	NCOA1	Q15788	1441 aa		37.11	■■■■□ 3.53
CNOT7-204	ENST00000518885	ADGRL2	O95490	1459 aa		37.11	■■■■□ 3.53
CNOT7-204	ENST00000518885	ZNF142	P52746	1687 aa	Predicted RBP	37.11	■■■■□ 3.53
CNOT7-204	ENST00000518885	ABCC3	O15438	1527 aa		37.1	■■■■□ 3.53
CNOT7-204	ENST00000518885	TNR	Q92752	1358 aa		37.09	■■■■□ 3.53
CNOT7-204	ENST00000518885	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	37.08	■■■■□ 3.53
CNOT7-204	ENST00000518885	KANK1	Q14678	1352 aa		37.07	■■■■□ 3.53
CNOT7-204	ENST00000518885	MROH1	Q8NDA8	1641 aa		37.06	■■■■□ 3.52
CNOT7-204	ENST00000518885	PRDM15	P57071	1507 aa	Predicted RBP	37.05	■■■■□ 3.52
CNOT7-204	ENST00000518885	STRC	Q7RTU9	1775 aa		37.04	■■■■□ 3.52
CNOT7-204	ENST00000518885	A2ML1	A8K2U0	1454 aa		37.03	■■■■□ 3.52
CNOT7-204	ENST00000518885	FBXO31	Q5XUX0	539 aa	Predicted RBP	37.03	■■■■□ 3.52
CNOT7-204	ENST00000518885	CAMSAP1	Q5T5Y3	1602 aa		37.03	■■■■□ 3.52
CNOT7-204	ENST00000518885	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	37.01	■■■■□ 3.51
CNOT7-204	ENST00000518885	PTPRT	O14522	1441 aa		37.01	■■■■□ 3.51
CNOT7-204	ENST00000518885	PPARGC1B	Q86YN6	1023 aa	Known RBP	37	■■■■□ 3.51
CNOT7-204	ENST00000518885	DEPDC5	O75140	1603 aa		36.99	■■■■□ 3.51
CNOT7-204	ENST00000518885	PLA2R1	Q13018	1463 aa		36.99	■■■■□ 3.51
CNOT7-204	ENST00000518885	NLRP1	Q9C000	1473 aa		36.99	■■■■□ 3.51
CNOT7-204	ENST00000518885	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	36.98	■■■■□ 3.51
CNOT7-204	ENST00000518885	CEP152	O94986	1710 aa		36.96	■■■■□ 3.51
CNOT7-204	ENST00000518885	PKD2	Q13563	968 aa		36.95	■■■■□ 3.51
CNOT7-204	ENST00000518885	ANKRD50	Q9ULJ7	1429 aa		36.93	■■■■□ 3.5
CNOT7-204	ENST00000518885	ROCK1	Q13464	1354 aa		36.93	■■■■□ 3.5
CNOT7-204	ENST00000518885	ARHGAP31	Q2M1Z3	1444 aa		36.93	■■■■□ 3.5
CNOT7-204	ENST00000518885	SPATA31D1	Q6ZQQ2	1576 aa		36.91	■■■■□ 3.5
CNOT7-204	ENST00000518885	ERVK-7	P63135	1459 aa		36.9	■■■■□ 3.5
CNOT7-204	ENST00000518885	THEMIS	Q8N1K5	641 aa	Predicted RBP	36.88	■■■■□ 3.49
CNOT7-204	ENST00000518885	ILDR1	Q86SU0	546 aa	Predicted RBP	36.87	■■■■□ 3.49
CNOT7-204	ENST00000518885	LMTK2	Q8IWU2	1503 aa		36.86	■■■■□ 3.49
CNOT7-204	ENST00000518885	NCKAP5L	Q9HCH0	1330 aa		36.84	■■■■□ 3.49
CNOT7-204	ENST00000518885	UGGT1	Q9NYU2	1555 aa		36.83	■■■■□ 3.49
CNOT7-204	ENST00000518885	ITGAE	P38570	1179 aa		36.83	■■■■□ 3.49
CNOT7-204	ENST00000518885	VWDE	Q8N2E2	1590 aa		36.83	■■■■□ 3.49
CNOT7-204	ENST00000518885	FBXO41	Q8TF61	875 aa		36.82	■■■■□ 3.48
CNOT7-204	ENST00000518885	RRBP1	Q9P2E9	1410 aa	Known RBP	36.8	■■■■□ 3.48
CNOT7-204	ENST00000518885	CERK	Q8TCT0	537 aa		36.78	■■■■□ 3.48
CNOT7-204	ENST00000518885	ANKLE2	Q86XL3	938 aa		36.75	■■■■□ 3.47
CNOT7-204	ENST00000518885	EFCAB6	Q5THR3	1501 aa		36.73	■■■■□ 3.47
CNOT7-204	ENST00000518885	POLR1A	O95602	1720 aa	Predicted RBP	36.71	■■■■□ 3.47
CNOT7-204	ENST00000518885	UNC13B	O14795	1591 aa		36.7	■■■■□ 3.46
CNOT7-204	ENST00000518885	RPRD2	Q5VT52	1461 aa	Known RBP	36.69	■■■■□ 3.46
CNOT7-204	ENST00000518885	CFAP65	Q6ZU64	1925 aa	Known RBP	36.67	■■■■□ 3.46
CNOT7-204	ENST00000518885	STAG3	Q9UJ98	1225 aa		36.63	■■■■□ 3.45
CNOT7-204	ENST00000518885	TET3	O43151	1660 aa		36.63	■■■■□ 3.45
CNOT7-204	ENST00000518885	UBR1	Q8IWV7	1749 aa		36.61	■■■■□ 3.45
CNOT7-204	ENST00000518885	NOS1	P29475	1434 aa		36.59	■■■■□ 3.45
CNOT7-204	ENST00000518885	NEURL4	Q96JN8	1562 aa		36.58	■■■■□ 3.45
CNOT7-204	ENST00000518885	SLC52A1	Q9NWF4	448 aa		36.58	■■■■□ 3.45
CNOT7-204	ENST00000518885	GCC2	Q8IWJ2	1684 aa		36.58	■■■■□ 3.45
CNOT7-204	ENST00000518885	MED14	O60244	1454 aa		36.57	■■■■□ 3.45
CNOT7-204	ENST00000518885	LTBP4	Q8N2S1	1624 aa		36.57	■■■■□ 3.44
CNOT7-204	ENST00000518885	NUP155	O75694	1391 aa		36.56	■■■■□ 3.44
CNOT7-204	ENST00000518885	NPHP4	O75161	1426 aa	Predicted RBP	36.56	■■■■□ 3.44
CNOT7-204	ENST00000518885	IQSEC2	Q5JU85	1478 aa		36.56	■■■■□ 3.44
CNOT7-204	ENST00000518885	IQGAP3	Q86VI3	1631 aa		36.55	■■■■□ 3.44
CNOT7-204	ENST00000518885	KDM5A	P29375	1690 aa	Known RBP	36.54	■■■■□ 3.44
CNOT7-204	ENST00000518885	EID1	Q9Y6B2	187 aa		36.54	■■■■□ 3.44
CNOT7-204	ENST00000518885	PIK3C2B	O00750	1634 aa		36.53	■■■■□ 3.44
CNOT7-204	ENST00000518885	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	36.53	■■■■□ 3.44
CNOT7-204	ENST00000518885	SYNM	O15061	1565 aa		36.52	■■■■□ 3.44
CNOT7-204	ENST00000518885	SLIT1	O75093	1534 aa		36.51	■■■■□ 3.44
CNOT7-204	ENST00000518885	IDI1	Q13907	227 aa		36.51	■■■■□ 3.44
CNOT7-204	ENST00000518885	SCAF11	Q99590	1463 aa	Known RBP	36.5	■■■■□ 3.43
CNOT7-204	ENST00000518885	IQGAP1	P46940	1657 aa		36.48	■■■■□ 3.43
CNOT7-204	ENST00000518885	ARHGAP23	Q9P227	1491 aa		36.48	■■■■□ 3.43
CNOT7-204	ENST00000518885	TXNDC2	Q86VQ3	553 aa		36.46	■■■■□ 3.43
CNOT7-204	ENST00000518885	TMEM2	Q9UHN6	1383 aa		36.45	■■■■□ 3.43
CNOT7-204	ENST00000518885	ADGRB3	O60242	1522 aa		36.44	■■■■□ 3.42
CNOT7-204	ENST00000518885	NAIP	Q13075	1403 aa		36.44	■■■■□ 3.42
CNOT7-204	ENST00000518885	HFM1	A2PYH4	1435 aa		36.42	■■■■□ 3.42
CNOT7-204	ENST00000518885	CPS1	P31327	1500 aa		36.41	■■■■□ 3.42
CNOT7-204	ENST00000518885		E9PCH4	1651 aa		36.41	■■■■□ 3.42
CNOT7-204	ENST00000518885	LTK	P29376	864 aa		36.36	■■■■□ 3.41
CNOT7-204	ENST00000518885	HDGF	P51858	240 aa	Known RBP	36.36	■■■■□ 3.41
CNOT7-204	ENST00000518885	TRIM52	Q96A61	297 aa		36.27	■■■■□ 3.4
CNOT7-204	ENST00000518885	CHGA	P10645	457 aa	Known RBP	36.26	■■■■□ 3.4
CNOT7-204	ENST00000518885	TMEM131L	A2VDJ0	1609 aa		36.24	■■■■□ 3.39
CNOT7-204	ENST00000518885	PPP1R15A	O75807	674 aa	Predicted RBP	36.23	■■■■□ 3.39
CNOT7-204	ENST00000518885	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	36.23	■■■■□ 3.39
CNOT7-204	ENST00000518885	UBAP1L	F5GYI3	381 aa		36.21	■■■■□ 3.39
CNOT7-204	ENST00000518885	ACIN1	Q9UKV3	1341 aa	Known RBP	36.21	■■■■□ 3.39
CNOT7-204	ENST00000518885	SPHKAP	Q2M3C7	1700 aa		36.2	■■■■□ 3.39
CNOT7-204	ENST00000518885	BCAN	Q96GW7	911 aa		36.2	■■■■□ 3.39
CNOT7-204	ENST00000518885	RIMS2	Q9UQ26	1411 aa		36.19	■■■■□ 3.38

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms