RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RNF17Q9BXT8 1623 aaKnown RBP33.57■■■□□ 2.97
VEGFA-217ENST00000518538 MROH2AA6NES4 1674 aa33.56■■■□□ 2.96
VEGFA-217ENST00000518538 PLPPR3Q6T4P5 718 aa33.56■■■□□ 2.96
VEGFA-217ENST00000518538 FAM135AQ9P2D6 1515 aa33.55■■■□□ 2.96
VEGFA-217ENST00000518538 ROCK1Q13464 1354 aa33.54■■■□□ 2.96
VEGFA-217ENST00000518538 CLTCQ00610 1675 aaKnown RBP33.54■■■□□ 2.96
VEGFA-217ENST00000518538 C3P01024 1663 aa33.53■■■□□ 2.96
VEGFA-217ENST00000518538 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
VEGFA-217ENST00000518538 ITGAEP38570 1179 aa33.52■■■□□ 2.96
VEGFA-217ENST00000518538 KDM5DQ9BY66 1539 aa33.51■■■□□ 2.95
VEGFA-217ENST00000518538 ZMYM3Q14202 1370 aa33.5■■■□□ 2.95
VEGFA-217ENST00000518538 MROH1Q8NDA8 1641 aa33.48■■■□□ 2.95
VEGFA-217ENST00000518538 WASHC2CQ9Y4E1 1318 aa33.45■■■□□ 2.95
VEGFA-217ENST00000518538 ANKRD50Q9ULJ7 1429 aa33.45■■■□□ 2.94
VEGFA-217ENST00000518538 PRDM15P57071 1507 aaPredicted RBP33.43■■■□□ 2.94
VEGFA-217ENST00000518538 DEPDC5O75140 1603 aa33.42■■■□□ 2.94
VEGFA-217ENST00000518538 ZC3H13Q5T200 1668 aaKnown RBP33.41■■■□□ 2.94
VEGFA-217ENST00000518538 ABCC3O15438 1527 aa33.4■■■□□ 2.94
VEGFA-217ENST00000518538 NPATQ14207 1427 aa33.39■■■□□ 2.94
VEGFA-217ENST00000518538 LMTK3Q96Q04 1460 aa33.37■■■□□ 2.93
VEGFA-217ENST00000518538 PREX1Q8TCU6 1659 aa33.34■■■□□ 2.93
VEGFA-217ENST00000518538 KANK1Q14678 1352 aa33.34■■■□□ 2.93
VEGFA-217ENST00000518538 PZPP20742 1482 aa33.33■■■□□ 2.93
VEGFA-217ENST00000518538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.33■■■□□ 2.931e-14■■■□□ 17.5
VEGFA-217ENST00000518538 SETD1BQ9UPS6 1966 aaKnown RBP33.32■■■□□ 2.92
VEGFA-217ENST00000518538 CEP152O94986 1710 aa33.31■■■□□ 2.92
VEGFA-217ENST00000518538 UHRF1BP1Q6BDS2 1440 aa33.3■■■□□ 2.92
VEGFA-217ENST00000518538 VWDEQ8N2E2 1590 aa33.3■■■□□ 2.92
VEGFA-217ENST00000518538 CAMSAP1Q5T5Y3 1602 aa33.28■■■□□ 2.92
VEGFA-217ENST00000518538 LMTK2Q8IWU2 1503 aa33.26■■■□□ 2.91
VEGFA-217ENST00000518538 UNC13BO14795 1591 aa33.26■■■□□ 2.91
VEGFA-217ENST00000518538 NAIPQ13075 1403 aa33.23■■■□□ 2.91
VEGFA-217ENST00000518538 ARHGAP31Q2M1Z3 1444 aa33.22■■■□□ 2.91
VEGFA-217ENST00000518538 FBXO31Q5XUX0 539 aaPredicted RBP33.22■■■□□ 2.91
VEGFA-217ENST00000518538 GCC2Q8IWJ2 1684 aa33.22■■■□□ 2.91
VEGFA-217ENST00000518538 HFM1A2PYH4 1435 aa33.21■■■□□ 2.91
VEGFA-217ENST00000518538 MYO3AQ8NEV4 1616 aa33.19■■■□□ 2.9
VEGFA-217ENST00000518538 TNRQ92752 1358 aa33.19■■■□□ 2.9
VEGFA-217ENST00000518538 SPATA31D1Q6ZQQ2 1576 aa33.17■■■□□ 2.9
VEGFA-217ENST00000518538 HSPA2P54652 639 aa33.16■■■□□ 2.9
VEGFA-217ENST00000518538 ERVK-7P63135 1459 aa33.16■■■□□ 2.9
VEGFA-217ENST00000518538 EFCAB6Q5THR3 1501 aa33.13■■■□□ 2.89
VEGFA-217ENST00000518538 ZNF142P52746 1687 aaPredicted RBP33.13■■■□□ 2.89
VEGFA-217ENST00000518538 IQGAP3Q86VI3 1631 aa33.11■■■□□ 2.89
VEGFA-217ENST00000518538 CEP170BQ9Y4F5 1589 aaPredicted RBP33.11■■■□□ 2.89
VEGFA-217ENST00000518538 TET3O43151 1660 aa33.1■■■□□ 2.89
VEGFA-217ENST00000518538 NUP155O75694 1391 aa33.09■■■□□ 2.89
VEGFA-217ENST00000518538 A2ML1A8K2U0 1454 aa33.08■■■□□ 2.89
VEGFA-217ENST00000518538 NLRP1Q9C000 1473 aa33.07■■■□□ 2.88
VEGFA-217ENST00000518538 RPRD2Q5VT52 1461 aaKnown RBP33.05■■■□□ 2.88
VEGFA-217ENST00000518538 CFAP65Q6ZU64 1925 aaKnown RBP33.02■■■□□ 2.88
VEGFA-217ENST00000518538 NOS1P29475 1434 aa32.99■■■□□ 2.87
VEGFA-217ENST00000518538 E9PCH4 1651 aa32.96■■■□□ 2.87
VEGFA-217ENST00000518538 UGGT1Q9NYU2 1555 aa32.95■■■□□ 2.86
VEGFA-217ENST00000518538 PLA2R1Q13018 1463 aa32.94■■■□□ 2.86
VEGFA-217ENST00000518538 SYNMO15061 1565 aa32.94■■■□□ 2.86
VEGFA-217ENST00000518538 STRCQ7RTU9 1775 aa32.93■■■□□ 2.86
VEGFA-217ENST00000518538 TRIM52Q96A61 297 aa32.92■■■□□ 2.86
VEGFA-217ENST00000518538 SETD5Q9C0A6 1442 aa32.92■■■□□ 2.86
VEGFA-217ENST00000518538 THEMISQ8N1K5 641 aaPredicted RBP32.88■■■□□ 2.85
VEGFA-217ENST00000518538 SLC52A1Q9NWF4 448 aa32.85■■■□□ 2.85
VEGFA-217ENST00000518538 UBR1Q8IWV7 1749 aa32.85■■■□□ 2.85
VEGFA-217ENST00000518538 PIK3C2BO00750 1634 aa32.84■■■□□ 2.85
VEGFA-217ENST00000518538 ACIN1Q9UKV3 1341 aaKnown RBP32.84■■■□□ 2.85
VEGFA-217ENST00000518538 IDI1Q13907 227 aa32.84■■■□□ 2.85
VEGFA-217ENST00000518538 PKD2Q13563 968 aa32.83■■■□□ 2.85
VEGFA-217ENST00000518538 DMRT2Q9Y5R5 561 aa32.83■■■□□ 2.85
VEGFA-217ENST00000518538 KDM5AP29375 1690 aaKnown RBP32.8■■■□□ 2.84
VEGFA-217ENST00000518538 RAB3GAP2Q9H2M9 1393 aa32.8■■■□□ 2.84
VEGFA-217ENST00000518538 NCKAP5LQ9HCH0 1330 aa32.79■■■□□ 2.84
VEGFA-217ENST00000518538 PTPRTO14522 1441 aa32.79■■■□□ 2.84
VEGFA-217ENST00000518538 SLC4A1APQ9BWU0 796 aaKnown RBP32.79■■■□□ 2.84
VEGFA-217ENST00000518538 STAG3Q9UJ98 1225 aa32.77■■■□□ 2.84
VEGFA-217ENST00000518538 ADGRB3O60242 1522 aa32.77■■■□□ 2.84
VEGFA-217ENST00000518538 SPHKAPQ2M3C7 1700 aa32.76■■■□□ 2.83
VEGFA-217ENST00000518538 ANKLE2Q86XL3 938 aa32.74■■■□□ 2.83
VEGFA-217ENST00000518538 POLR1AO95602 1720 aaPredicted RBP32.74■■■□□ 2.83
VEGFA-217ENST00000518538 SLIT1O75093 1534 aa32.73■■■□□ 2.83
VEGFA-217ENST00000518538 ARHGAP23Q9P227 1491 aa32.72■■■□□ 2.83
VEGFA-217ENST00000518538 NEURL4Q96JN8 1562 aa32.7■■■□□ 2.83
VEGFA-217ENST00000518538 TMEM2Q9UHN6 1383 aa32.7■■■□□ 2.82
VEGFA-217ENST00000518538 TRPM2O94759 1503 aa32.69■■■□□ 2.82
VEGFA-217ENST00000518538 MPHOSPH9Q99550 1183 aa32.69■■■□□ 2.82
VEGFA-217ENST00000518538 HRCP23327 699 aa32.68■■■□□ 2.82
VEGFA-217ENST00000518538 TMEM131LA2VDJ0 1609 aa32.67■■■□□ 2.82
VEGFA-217ENST00000518538 MED14O60244 1454 aa32.66■■■□□ 2.82
VEGFA-217ENST00000518538 SCAF11Q99590 1463 aaKnown RBP32.65■■■□□ 2.82
VEGFA-217ENST00000518538 NPHP4O75161 1426 aaPredicted RBP32.62■■■□□ 2.81
VEGFA-217ENST00000518538 EID1Q9Y6B2 187 aa32.62■■■□□ 2.81
VEGFA-217ENST00000518538 CHGAP10645 457 aaKnown RBP32.61■■■□□ 2.81
VEGFA-217ENST00000518538 TXNDC2Q86VQ3 553 aa32.61■■■□□ 2.81
VEGFA-217ENST00000518538 CLTCL1P53675 1640 aa32.6■■■□□ 2.81
VEGFA-217ENST00000518538 LTKP29376 864 aa32.6■■■□□ 2.81
VEGFA-217ENST00000518538 MYO5BQ9ULV0 1848 aa32.59■■■□□ 2.81
VEGFA-217ENST00000518538 FOXD1Q16676 465 aa32.59■■■□□ 2.81
VEGFA-217ENST00000518538 IQGAP1P46940 1657 aa32.57■■■□□ 2.8
VEGFA-217ENST00000518538 ZFYVE9O95405 1425 aa32.55■■■□□ 2.8
VEGFA-217ENST00000518538 TRIM26Q12899 539 aaPredicted RBP32.54■■■□□ 2.8
VEGFA-217ENST00000518538 RIMS2Q9UQ26 1411 aa32.53■■■□□ 2.8
VEGFA-217ENST00000518538 HDGFP51858 240 aaKnown RBP32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms