RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
RN7SKP52-201ENST00000516219 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
RN7SKP52-201ENST00000516219 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
RN7SKP52-201ENST00000516219 MROH2AA6NES4 1674 aa15.4■□□□□ 0.06
RN7SKP52-201ENST00000516219 POTEGQ6S5H5 508 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 FMN1Q68DA7 1419 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 AGLP35573 1532 aa15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 MLH3Q9UHC1 1453 aa15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
RN7SKP52-201ENST00000516219 MYO3AQ8NEV4 1616 aa15.36■□□□□ 0.05
RN7SKP52-201ENST00000516219 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
RN7SKP52-201ENST00000516219 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
RN7SKP52-201ENST00000516219 PTPRTO14522 1441 aa15.34■□□□□ 0.05
RN7SKP52-201ENST00000516219 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
RN7SKP52-201ENST00000516219 OTUD5Q96G74 571 aa15.33■□□□□ 0.04
RN7SKP52-201ENST00000516219 CLIP1P30622 1438 aa15.32■□□□□ 0.04
RN7SKP52-201ENST00000516219 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
RN7SKP52-201ENST00000516219 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
RN7SKP52-201ENST00000516219 SOCS7O14512 581 aa15.3■□□□□ 0.04
RN7SKP52-201ENST00000516219 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
RN7SKP52-201ENST00000516219 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.04
RN7SKP52-201ENST00000516219 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 CCDC18Q5T9S5 1454 aa15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
RN7SKP52-201ENST00000516219 NPATQ14207 1427 aa15.22■□□□□ 0.03
RN7SKP52-201ENST00000516219 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
RN7SKP52-201ENST00000516219 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
RN7SKP52-201ENST00000516219 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 NEURL4Q96JN8 1562 aa15.19■□□□□ 0.02
RN7SKP52-201ENST00000516219 DNMT1P26358 1616 aaKnown RBP15.19■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZMYM3Q14202 1370 aa15.18■□□□□ 0.02
RN7SKP52-201ENST00000516219 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 A2MP01023 1474 aa15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
RN7SKP52-201ENST00000516219 HNRNPMP52272 730 aaKnown RBP eCLIP15.15■□□□□ 0.02
RN7SKP52-201ENST00000516219 STRCP1A6NGW2 1772 aa15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
RN7SKP52-201ENST00000516219 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
RN7SKP52-201ENST00000516219 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
RN7SKP52-201ENST00000516219 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
RN7SKP52-201ENST00000516219 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
RN7SKP52-201ENST00000516219 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
RN7SKP52-201ENST00000516219 VWDEQ8N2E2 1590 aa15.08■□□□□ 0
RN7SKP52-201ENST00000516219 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
RN7SKP52-201ENST00000516219 MBD5Q9P267 1494 aa15.07■□□□□ 0
RN7SKP52-201ENST00000516219 GGT6Q6P531 493 aa15.06■□□□□ 0
RN7SKP52-201ENST00000516219 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
RN7SKP52-201ENST00000516219 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
RN7SKP52-201ENST00000516219 XIRP1Q702N8 1843 aaKnown RBP15.04■□□□□ -0
RN7SKP52-201ENST00000516219 IQGAP1P46940 1657 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
RN7SKP52-201ENST00000516219 PKD2Q13563 968 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 CEP152O94986 1710 aa15.03■□□□□ -0
RN7SKP52-201ENST00000516219 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
RN7SKP52-201ENST00000516219 CPS1P31327 1500 aa15.02■□□□□ -0
RN7SKP52-201ENST00000516219 HSPA1LP34931 641 aa15.02■□□□□ -0
RN7SKP52-201ENST00000516219 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
RN7SKP52-201ENST00000516219 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
RN7SKP52-201ENST00000516219 PZPP20742 1482 aa15.01□□□□□ -0.01
RN7SKP52-201ENST00000516219 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
RN7SKP52-201ENST00000516219 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
RN7SKP52-201ENST00000516219 PIP4K2BP78356 416 aa14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 RNF17Q9BXT8 1623 aaKnown RBP14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 TNRQ92752 1358 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 MROH1Q8NDA8 1641 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 SYNMO15061 1565 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 UGGT1Q9NYU2 1555 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms