RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 AEBP2Q6ZN18 517 aaPredicted RBP30.32■■■□□ 2.44
RN7SKP52-201ENST00000516219 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
RN7SKP52-201ENST00000516219 SENP3Q9H4L4 574 aaPredicted RBP26.22■■□□□ 1.79
RN7SKP52-201ENST00000516219 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
RN7SKP52-201ENST00000516219 POTEDQ86YR6 584 aa24.66■■□□□ 1.54
RN7SKP52-201ENST00000516219 FOXD1Q16676 465 aa24.47■■□□□ 1.51
RN7SKP52-201ENST00000516219 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
RN7SKP52-201ENST00000516219 MSH5O43196 834 aa23.46■■□□□ 1.35
RN7SKP52-201ENST00000516219 PIAS4Q8N2W9 510 aaPredicted RBP22.7■■□□□ 1.22
RN7SKP52-201ENST00000516219 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
RN7SKP52-201ENST00000516219 ADRA2BP18089 450 aa21.9■■□□□ 1.1
RN7SKP52-201ENST00000516219 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
RN7SKP52-201ENST00000516219 ABCC9O60706 1549 aa21.75■■□□□ 1.07
RN7SKP52-201ENST00000516219 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
RN7SKP52-201ENST00000516219 CACNB1Q02641 598 aaPredicted RBP20.82■□□□□ 0.92
RN7SKP52-201ENST00000516219 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
RN7SKP52-201ENST00000516219 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
RN7SKP52-201ENST00000516219 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
RN7SKP52-201ENST00000516219 MAPK8IP2Q13387 824 aaPredicted RBP20.42■□□□□ 0.86
RN7SKP52-201ENST00000516219 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
RN7SKP52-201ENST00000516219 NACADO15069 1562 aa20.29■□□□□ 0.84
RN7SKP52-201ENST00000516219 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
RN7SKP52-201ENST00000516219 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
RN7SKP52-201ENST00000516219 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
RN7SKP52-201ENST00000516219 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
RN7SKP52-201ENST00000516219 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
RN7SKP52-201ENST00000516219 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
RN7SKP52-201ENST00000516219 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
RN7SKP52-201ENST00000516219 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
RN7SKP52-201ENST00000516219 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
RN7SKP52-201ENST00000516219 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
RN7SKP52-201ENST00000516219 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
RN7SKP52-201ENST00000516219 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
RN7SKP52-201ENST00000516219 C1QBPQ07021 282 aaKnown RBP19.55■□□□□ 0.72
RN7SKP52-201ENST00000516219 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
RN7SKP52-201ENST00000516219 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
RN7SKP52-201ENST00000516219 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
RN7SKP52-201ENST00000516219 POTEHQ6S545 545 aa19.17■□□□□ 0.66
RN7SKP52-201ENST00000516219 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
RN7SKP52-201ENST00000516219 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
RN7SKP52-201ENST00000516219 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
RN7SKP52-201ENST00000516219 CNKSR2Q8WXI2 1034 aa18.87■□□□□ 0.61
RN7SKP52-201ENST00000516219 CUX2O14529 1486 aa18.77■□□□□ 0.6
RN7SKP52-201ENST00000516219 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
RN7SKP52-201ENST00000516219 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
RN7SKP52-201ENST00000516219 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
RN7SKP52-201ENST00000516219 NESP48681 1621 aa18.66■□□□□ 0.58
RN7SKP52-201ENST00000516219 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
RN7SKP52-201ENST00000516219 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
RN7SKP52-201ENST00000516219 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
RN7SKP52-201ENST00000516219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
RN7SKP52-201ENST00000516219 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
RN7SKP52-201ENST00000516219 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
RN7SKP52-201ENST00000516219 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
RN7SKP52-201ENST00000516219 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
RN7SKP52-201ENST00000516219 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
RN7SKP52-201ENST00000516219 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
RN7SKP52-201ENST00000516219 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
RN7SKP52-201ENST00000516219 WIZO95785 1651 aa18.2■□□□□ 0.5
RN7SKP52-201ENST00000516219 DSG3P32926 999 aa18.19■□□□□ 0.5
RN7SKP52-201ENST00000516219 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
RN7SKP52-201ENST00000516219 WDR62O43379 1518 aa18.16■□□□□ 0.5
RN7SKP52-201ENST00000516219 CAPN15O75808 1086 aa18.15■□□□□ 0.5
RN7SKP52-201ENST00000516219 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
RN7SKP52-201ENST00000516219 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
RN7SKP52-201ENST00000516219 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
RN7SKP52-201ENST00000516219 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
RN7SKP52-201ENST00000516219 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
RN7SKP52-201ENST00000516219 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
RN7SKP52-201ENST00000516219 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
RN7SKP52-201ENST00000516219 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
RN7SKP52-201ENST00000516219 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
RN7SKP52-201ENST00000516219 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
RN7SKP52-201ENST00000516219 CFTRP13569 1480 aa17.87■□□□□ 0.45
RN7SKP52-201ENST00000516219 RIMBP3CA6NJZ7 1639 aa17.84■□□□□ 0.45
RN7SKP52-201ENST00000516219 RIMBP3BA6NNM3 1639 aa17.84■□□□□ 0.45
RN7SKP52-201ENST00000516219 RIMBP3Q9UFD9 1639 aa17.84■□□□□ 0.45
RN7SKP52-201ENST00000516219 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
RN7SKP52-201ENST00000516219 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
RN7SKP52-201ENST00000516219 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
RN7SKP52-201ENST00000516219 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
RN7SKP52-201ENST00000516219 CHD1O14646 1710 aa17.69■□□□□ 0.42
RN7SKP52-201ENST00000516219 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
RN7SKP52-201ENST00000516219 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
RN7SKP52-201ENST00000516219 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
RN7SKP52-201ENST00000516219 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
RN7SKP52-201ENST00000516219 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RN7SKP52-201ENST00000516219 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
RN7SKP52-201ENST00000516219 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
RN7SKP52-201ENST00000516219 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
RN7SKP52-201ENST00000516219 ABCB7O75027 752 aa17.56■□□□□ 0.4
RN7SKP52-201ENST00000516219 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
RN7SKP52-201ENST00000516219 APLP2Q06481 763 aa17.53■□□□□ 0.4
RN7SKP52-201ENST00000516219 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
RN7SKP52-201ENST00000516219 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
RN7SKP52-201ENST00000516219 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
RN7SKP52-201ENST00000516219 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
RN7SKP52-201ENST00000516219 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.39
RN7SKP52-201ENST00000516219 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
RN7SKP52-201ENST00000516219 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms