RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
MATR3-239ENST00000514694 MROH1Q8NDA8 1641 aa23.46■■□□□ 1.35
MATR3-239ENST00000514694 RNF17Q9BXT8 1623 aaKnown RBP23.45■■□□□ 1.34
MATR3-239ENST00000514694 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
MATR3-239ENST00000514694 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
MATR3-239ENST00000514694 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
MATR3-239ENST00000514694 CLTCQ00610 1675 aaKnown RBP23.41■■□□□ 1.34
MATR3-239ENST00000514694 CNTLNQ9NXG0 1405 aa23.41■■□□□ 1.34
MATR3-239ENST00000514694 ESF1Q9H501 851 aaKnown RBP23.4■■□□□ 1.34
MATR3-239ENST00000514694 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
MATR3-239ENST00000514694 ZMYM3Q14202 1370 aa23.38■■□□□ 1.33
MATR3-239ENST00000514694 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
MATR3-239ENST00000514694 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
MATR3-239ENST00000514694 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
MATR3-239ENST00000514694 NAIPQ13075 1403 aa23.37■■□□□ 1.33
MATR3-239ENST00000514694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.338e-8■■□□□ 13.5
MATR3-239ENST00000514694 C3P01024 1663 aa23.37■■□□□ 1.33
MATR3-239ENST00000514694 ABCC3O15438 1527 aa23.37■■□□□ 1.33
MATR3-239ENST00000514694 WASHC2CQ9Y4E1 1318 aa23.36■■□□□ 1.33
MATR3-239ENST00000514694 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
MATR3-239ENST00000514694 FOXD1Q16676 465 aa23.34■■□□□ 1.33
MATR3-239ENST00000514694 FAM135AQ9P2D6 1515 aa23.33■■□□□ 1.33
MATR3-239ENST00000514694 HFM1A2PYH4 1435 aa23.33■■□□□ 1.32
MATR3-239ENST00000514694 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
MATR3-239ENST00000514694 CEP152O94986 1710 aa23.29■■□□□ 1.32
MATR3-239ENST00000514694 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
MATR3-239ENST00000514694 UNC13BO14795 1591 aa23.28■■□□□ 1.32
MATR3-239ENST00000514694 FBXO31Q5XUX0 539 aaPredicted RBP23.28■■□□□ 1.32
MATR3-239ENST00000514694 ZC3H13Q5T200 1668 aaKnown RBP23.27■■□□□ 1.32
MATR3-239ENST00000514694 PZPP20742 1482 aa23.26■■□□□ 1.31
MATR3-239ENST00000514694 KANK1Q14678 1352 aa23.26■■□□□ 1.31
MATR3-239ENST00000514694 CAMSAP1Q5T5Y3 1602 aa23.25■■□□□ 1.31
MATR3-239ENST00000514694 NPATQ14207 1427 aa23.25■■□□□ 1.31
MATR3-239ENST00000514694 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
MATR3-239ENST00000514694 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
MATR3-239ENST00000514694 NUP155O75694 1391 aa23.21■■□□□ 1.31
MATR3-239ENST00000514694 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
MATR3-239ENST00000514694 EFCAB6Q5THR3 1501 aa23.18■■□□□ 1.3
MATR3-239ENST00000514694 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
MATR3-239ENST00000514694 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
MATR3-239ENST00000514694 TNRQ92752 1358 aa23.16■■□□□ 1.3
MATR3-239ENST00000514694 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
MATR3-239ENST00000514694 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
MATR3-239ENST00000514694 HSPA2P54652 639 aa23.15■■□□□ 1.3
MATR3-239ENST00000514694 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
MATR3-239ENST00000514694 SETD5Q9C0A6 1442 aa23.15■■□□□ 1.3
MATR3-239ENST00000514694 TET3O43151 1660 aa23.13■■□□□ 1.29
MATR3-239ENST00000514694 MYO3AQ8NEV4 1616 aa23.13■■□□□ 1.29
MATR3-239ENST00000514694 SETD1BQ9UPS6 1966 aaKnown RBP23.11■■□□□ 1.29
MATR3-239ENST00000514694 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
MATR3-239ENST00000514694 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
MATR3-239ENST00000514694 NOS1P29475 1434 aa23.08■■□□□ 1.29
MATR3-239ENST00000514694 E9PCH4 1651 aa23.08■■□□□ 1.29
MATR3-239ENST00000514694 SYNMO15061 1565 aa23.07■■□□□ 1.28
MATR3-239ENST00000514694 CEP170BQ9Y4F5 1589 aaPredicted RBP23.07■■□□□ 1.28
MATR3-239ENST00000514694 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
MATR3-239ENST00000514694 CFAP65Q6ZU64 1925 aaKnown RBP23.07■■□□□ 1.28
MATR3-239ENST00000514694 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
MATR3-239ENST00000514694 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
MATR3-239ENST00000514694 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
MATR3-239ENST00000514694 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
MATR3-239ENST00000514694 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
MATR3-239ENST00000514694 PKD2Q13563 968 aa23■■□□□ 1.27
MATR3-239ENST00000514694 IDI1Q13907 227 aa23■■□□□ 1.27
MATR3-239ENST00000514694 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
MATR3-239ENST00000514694 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
MATR3-239ENST00000514694 PTPRTO14522 1441 aa22.97■■□□□ 1.27
MATR3-239ENST00000514694 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
MATR3-239ENST00000514694 PIK3C2BO00750 1634 aa22.96■■□□□ 1.27
MATR3-239ENST00000514694 HRCP23327 699 aa22.93■■□□□ 1.26
MATR3-239ENST00000514694 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
MATR3-239ENST00000514694 STRCQ7RTU9 1775 aa22.92■■□□□ 1.26
MATR3-239ENST00000514694 UBR1Q8IWV7 1749 aa22.92■■□□□ 1.26
MATR3-239ENST00000514694 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
MATR3-239ENST00000514694 NCKAP5LQ9HCH0 1330 aa22.9■■□□□ 1.26
MATR3-239ENST00000514694 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
MATR3-239ENST00000514694 TRPM2O94759 1503 aa22.89■■□□□ 1.26
MATR3-239ENST00000514694 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
MATR3-239ENST00000514694 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
MATR3-239ENST00000514694 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
MATR3-239ENST00000514694 ARHGAP23Q9P227 1491 aa22.85■■□□□ 1.25
MATR3-239ENST00000514694 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
MATR3-239ENST00000514694 TMEM131LA2VDJ0 1609 aa22.85■■□□□ 1.25
MATR3-239ENST00000514694 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
MATR3-239ENST00000514694 SLIT1O75093 1534 aa22.83■■□□□ 1.25
MATR3-239ENST00000514694 NEURL4Q96JN8 1562 aa22.83■■□□□ 1.25
MATR3-239ENST00000514694 KDM5AP29375 1690 aaKnown RBP22.83■■□□□ 1.24
MATR3-239ENST00000514694 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
MATR3-239ENST00000514694 LTKP29376 864 aa22.82■■□□□ 1.24
MATR3-239ENST00000514694 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
MATR3-239ENST00000514694 MYO5BQ9ULV0 1848 aa22.79■■□□□ 1.24
MATR3-239ENST00000514694 ZFYVE9O95405 1425 aa22.78■■□□□ 1.24
MATR3-239ENST00000514694 SCAF11Q99590 1463 aaKnown RBP22.78■■□□□ 1.24
MATR3-239ENST00000514694 TXNDC2Q86VQ3 553 aa22.77■■□□□ 1.24
MATR3-239ENST00000514694 POLR1AO95602 1720 aaPredicted RBP22.76■■□□□ 1.23
MATR3-239ENST00000514694 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
MATR3-239ENST00000514694 MED14O60244 1454 aa22.75■■□□□ 1.23
MATR3-239ENST00000514694 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
MATR3-239ENST00000514694 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
MATR3-239ENST00000514694 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms