RNA–Protein interactions for RNA: ENST00000513119.5

CALCOCO2-221, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 973 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-221ENST00000513119 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
CALCOCO2-221ENST00000513119 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
CALCOCO2-221ENST00000513119 SPATA31D1Q6ZQQ2 1576 aa12.16□□□□□ -0.46
CALCOCO2-221ENST00000513119 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
CALCOCO2-221ENST00000513119 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-221ENST00000513119 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
CALCOCO2-221ENST00000513119 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
CALCOCO2-221ENST00000513119 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO2-221ENST00000513119 ABCB7O75027 752 aa12.14□□□□□ -0.47
CALCOCO2-221ENST00000513119 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
CALCOCO2-221ENST00000513119 A2MP01023 1474 aa12.14□□□□□ -0.47
CALCOCO2-221ENST00000513119 TCOF1Q13428 1488 aaKnown RBP12.13□□□□□ -0.47
CALCOCO2-221ENST00000513119 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
CALCOCO2-221ENST00000513119 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO2-221ENST00000513119 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
CALCOCO2-221ENST00000513119 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-221ENST00000513119 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
CALCOCO2-221ENST00000513119 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
CALCOCO2-221ENST00000513119 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-221ENST00000513119 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
CALCOCO2-221ENST00000513119 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
CALCOCO2-221ENST00000513119 PKD2Q13563 968 aa12.1□□□□□ -0.47
CALCOCO2-221ENST00000513119 GGT6Q6P531 493 aa12.1□□□□□ -0.47
CALCOCO2-221ENST00000513119 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
CALCOCO2-221ENST00000513119 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
CALCOCO2-221ENST00000513119 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
CALCOCO2-221ENST00000513119 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
CALCOCO2-221ENST00000513119 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
CALCOCO2-221ENST00000513119 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
CALCOCO2-221ENST00000513119 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
CALCOCO2-221ENST00000513119 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
CALCOCO2-221ENST00000513119 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
CALCOCO2-221ENST00000513119 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-221ENST00000513119 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
CALCOCO2-221ENST00000513119 POLA2Q14181 598 aa12.03□□□□□ -0.48
CALCOCO2-221ENST00000513119 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
CALCOCO2-221ENST00000513119 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.49
CALCOCO2-221ENST00000513119 TNRQ92752 1358 aa12.02□□□□□ -0.49
CALCOCO2-221ENST00000513119 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CALCOCO2-221ENST00000513119 PZPP20742 1482 aa12.01□□□□□ -0.49
CALCOCO2-221ENST00000513119 KIF3BO15066 747 aa12□□□□□ -0.49
CALCOCO2-221ENST00000513119 HSPA1LP34931 641 aa11.99□□□□□ -0.49
CALCOCO2-221ENST00000513119 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
CALCOCO2-221ENST00000513119 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
CALCOCO2-221ENST00000513119 KDM5DQ9BY66 1539 aa11.99□□□□□ -0.49
CALCOCO2-221ENST00000513119 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 VWDEQ8N2E2 1590 aa11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 CPS1P31327 1500 aa11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 CAMSAP2Q08AD1 1489 aa11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.97□□□□□ -0.49
CALCOCO2-221ENST00000513119 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
CALCOCO2-221ENST00000513119 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
CALCOCO2-221ENST00000513119 PIP4K2BP78356 416 aa11.96□□□□□ -0.49
CALCOCO2-221ENST00000513119 POLR1AO95602 1720 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO2-221ENST00000513119 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
CALCOCO2-221ENST00000513119 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO2-221ENST00000513119 MED14O60244 1454 aa11.95□□□□□ -0.5
CALCOCO2-221ENST00000513119 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
CALCOCO2-221ENST00000513119 TOM1O60784 492 aa11.94□□□□□ -0.5
CALCOCO2-221ENST00000513119 ANKLE2Q86XL3 938 aa11.94□□□□□ -0.5
CALCOCO2-221ENST00000513119 NPHP4O75161 1426 aaPredicted RBP11.94□□□□□ -0.5
CALCOCO2-221ENST00000513119 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
CALCOCO2-221ENST00000513119 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
CALCOCO2-221ENST00000513119 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CALCOCO2-221ENST00000513119 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
CALCOCO2-221ENST00000513119 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
CALCOCO2-221ENST00000513119 ABCC3O15438 1527 aa11.91□□□□□ -0.5
CALCOCO2-221ENST00000513119 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-221ENST00000513119 LRRC7Q96NW7 1537 aa11.89□□□□□ -0.51
CALCOCO2-221ENST00000513119 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
CALCOCO2-221ENST00000513119 STRCP1A6NGW2 1772 aa11.88□□□□□ -0.51
CALCOCO2-221ENST00000513119 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
CALCOCO2-221ENST00000513119 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
CALCOCO2-221ENST00000513119 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
CALCOCO2-221ENST00000513119 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
CALCOCO2-221ENST00000513119 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
CALCOCO2-221ENST00000513119 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
CALCOCO2-221ENST00000513119 LTKP29376 864 aa11.85□□□□□ -0.51
CALCOCO2-221ENST00000513119 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-221ENST00000513119 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-221ENST00000513119 ZC3H13Q5T200 1668 aaKnown RBP11.84□□□□□ -0.51
CALCOCO2-221ENST00000513119 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
CALCOCO2-221ENST00000513119 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
CALCOCO2-221ENST00000513119 SYNMO15061 1565 aa11.83□□□□□ -0.52
CALCOCO2-221ENST00000513119 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-221ENST00000513119 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-221ENST00000513119 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
CALCOCO2-221ENST00000513119 SLIT1O75093 1534 aa11.81□□□□□ -0.52
CALCOCO2-221ENST00000513119 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
CALCOCO2-221ENST00000513119 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-221ENST00000513119 CEP152O94986 1710 aa11.8□□□□□ -0.52
CALCOCO2-221ENST00000513119 ARHGAP31Q2M1Z3 1444 aa11.8□□□□□ -0.52
CALCOCO2-221ENST00000513119 DUOX2Q9NRD8 1548 aa11.8□□□□□ -0.52
CALCOCO2-221ENST00000513119 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
CALCOCO2-221ENST00000513119 PRDM15P57071 1507 aaPredicted RBP11.79□□□□□ -0.52
CALCOCO2-221ENST00000513119 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
CALCOCO2-221ENST00000513119 ABCC5O15440 1437 aa11.78□□□□□ -0.52
CALCOCO2-221ENST00000513119 MAP3K1Q13233 1512 aa11.78□□□□□ -0.52
CALCOCO2-221ENST00000513119 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms