RNA–Protein interactions for RNA: ENST00000513119.5

CALCOCO2-221, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 973 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-221ENST00000513119 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
CALCOCO2-221ENST00000513119 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
CALCOCO2-221ENST00000513119 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
CALCOCO2-221ENST00000513119 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
CALCOCO2-221ENST00000513119 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CALCOCO2-221ENST00000513119 ABCC9O60706 1549 aa17.27■□□□□ 0.36
CALCOCO2-221ENST00000513119 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
CALCOCO2-221ENST00000513119 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
CALCOCO2-221ENST00000513119 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
CALCOCO2-221ENST00000513119 FOXD1Q16676 465 aa16.27■□□□□ 0.2
CALCOCO2-221ENST00000513119 NACADO15069 1562 aa16.17■□□□□ 0.18
CALCOCO2-221ENST00000513119 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
CALCOCO2-221ENST00000513119 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
CALCOCO2-221ENST00000513119 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
CALCOCO2-221ENST00000513119 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
CALCOCO2-221ENST00000513119 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
CALCOCO2-221ENST00000513119 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
CALCOCO2-221ENST00000513119 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
CALCOCO2-221ENST00000513119 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
CALCOCO2-221ENST00000513119 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
CALCOCO2-221ENST00000513119 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
CALCOCO2-221ENST00000513119 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
CALCOCO2-221ENST00000513119 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
CALCOCO2-221ENST00000513119 ADRA2BP18089 450 aa15.56■□□□□ 0.08
CALCOCO2-221ENST00000513119 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
CALCOCO2-221ENST00000513119 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
CALCOCO2-221ENST00000513119 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO2-221ENST00000513119 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
CALCOCO2-221ENST00000513119 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
CALCOCO2-221ENST00000513119 CUX2O14529 1486 aa14.95□□□□□ -0.02
CALCOCO2-221ENST00000513119 MSH5O43196 834 aa14.92□□□□□ -0.02
CALCOCO2-221ENST00000513119 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
CALCOCO2-221ENST00000513119 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
CALCOCO2-221ENST00000513119 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
CALCOCO2-221ENST00000513119 NESP48681 1621 aa14.81□□□□□ -0.04
CALCOCO2-221ENST00000513119 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CALCOCO2-221ENST00000513119 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
CALCOCO2-221ENST00000513119 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
CALCOCO2-221ENST00000513119 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
CALCOCO2-221ENST00000513119 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
CALCOCO2-221ENST00000513119 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
CALCOCO2-221ENST00000513119 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
CALCOCO2-221ENST00000513119 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
CALCOCO2-221ENST00000513119 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
CALCOCO2-221ENST00000513119 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
CALCOCO2-221ENST00000513119 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
CALCOCO2-221ENST00000513119 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
CALCOCO2-221ENST00000513119 WDR62O43379 1518 aa14.42□□□□□ -0.1
CALCOCO2-221ENST00000513119 WIZO95785 1651 aa14.4□□□□□ -0.1
CALCOCO2-221ENST00000513119 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
CALCOCO2-221ENST00000513119 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
CALCOCO2-221ENST00000513119 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
CALCOCO2-221ENST00000513119 CFTRP13569 1480 aa14.31□□□□□ -0.12
CALCOCO2-221ENST00000513119 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
CALCOCO2-221ENST00000513119 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
CALCOCO2-221ENST00000513119 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
CALCOCO2-221ENST00000513119 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
CALCOCO2-221ENST00000513119 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
CALCOCO2-221ENST00000513119 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
CALCOCO2-221ENST00000513119 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
CALCOCO2-221ENST00000513119 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
CALCOCO2-221ENST00000513119 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
CALCOCO2-221ENST00000513119 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
CALCOCO2-221ENST00000513119 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
CALCOCO2-221ENST00000513119 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
CALCOCO2-221ENST00000513119 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
CALCOCO2-221ENST00000513119 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
CALCOCO2-221ENST00000513119 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
CALCOCO2-221ENST00000513119 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
CALCOCO2-221ENST00000513119 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
CALCOCO2-221ENST00000513119 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
CALCOCO2-221ENST00000513119 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
CALCOCO2-221ENST00000513119 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■□ 26.1
CALCOCO2-221ENST00000513119 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
CALCOCO2-221ENST00000513119 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
CALCOCO2-221ENST00000513119 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
CALCOCO2-221ENST00000513119 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-221ENST00000513119 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
CALCOCO2-221ENST00000513119 KCNA4P22459 653 aa13.87□□□□□ -0.19
CALCOCO2-221ENST00000513119 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
CALCOCO2-221ENST00000513119 CHD1O14646 1710 aa13.87□□□□□ -0.19
CALCOCO2-221ENST00000513119 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
CALCOCO2-221ENST00000513119 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.19
CALCOCO2-221ENST00000513119 FBLN2P98095 1184 aa13.83□□□□□ -0.2
CALCOCO2-221ENST00000513119 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
CALCOCO2-221ENST00000513119 SOGA1O94964 1423 aa13.81□□□□□ -0.2
CALCOCO2-221ENST00000513119 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
CALCOCO2-221ENST00000513119 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO2-221ENST00000513119 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
CALCOCO2-221ENST00000513119 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
CALCOCO2-221ENST00000513119 CUX1P39880 1505 aa13.75□□□□□ -0.21
CALCOCO2-221ENST00000513119 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
CALCOCO2-221ENST00000513119 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
CALCOCO2-221ENST00000513119 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-221ENST00000513119 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-221ENST00000513119 GRIN2BQ13224 1484 aa13.71□□□□□ -0.21
CALCOCO2-221ENST00000513119 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
CALCOCO2-221ENST00000513119 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
CALCOCO2-221ENST00000513119 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
CALCOCO2-221ENST00000513119 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms