RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RNF39Q9H2S5 420 aa7.02□□□□□ -1.28
TRAPPC11-208ENST00000511955 ZNF316A6NFI3 1004 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC11-208ENST00000511955 ZC3H15Q8WU90 426 aaKnown RBP7.01□□□□□ -1.29
TRAPPC11-208ENST00000511955 EFCAB5A4FU69 1503 aa7.01□□□□□ -1.29
TRAPPC11-208ENST00000511955 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
TRAPPC11-208ENST00000511955 ABCC2Q92887 1545 aa7□□□□□ -1.29
TRAPPC11-208ENST00000511955 CCDC125Q86Z20 511 aa7□□□□□ -1.29
TRAPPC11-208ENST00000511955 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
TRAPPC11-208ENST00000511955 TEX2Q8IWB9 1127 aa6.99□□□□□ -1.29
TRAPPC11-208ENST00000511955 FBXW7Q969H0 707 aa6.99□□□□□ -1.29
TRAPPC11-208ENST00000511955 GPBP1L1Q9HC44 474 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-208ENST00000511955 ABCA8O94911 1581 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 CDK13Q14004 1512 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 FMN1Q68DA7 1419 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 WDR70Q9NW82 654 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 RAPGEF6Q8TEU7 1601 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 NUP153P49790 1475 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
TRAPPC11-208ENST00000511955 ZCCHC11Q5TAX3 1644 aaKnown RBP6.97□□□□□ -1.29
TRAPPC11-208ENST00000511955 PPARGC1BQ86YN6 1023 aaKnown RBP6.97□□□□□ -1.29
TRAPPC11-208ENST00000511955 ATP10BO94823 1461 aa6.97□□□□□ -1.29
TRAPPC11-208ENST00000511955 C1QBPQ07021 282 aaKnown RBP6.96□□□□□ -1.29
TRAPPC11-208ENST00000511955 PCF11O94913 1555 aaKnown RBP6.96□□□□□ -1.3
TRAPPC11-208ENST00000511955 KDM5BQ9UGL1 1544 aa6.96□□□□□ -1.3
TRAPPC11-208ENST00000511955 UHRF1BP1LA0JNW5 1464 aa6.96□□□□□ -1.3
TRAPPC11-208ENST00000511955 PLEKHD1A6NEE1 506 aa6.95□□□□□ -1.3
TRAPPC11-208ENST00000511955 PTMSP20962 102 aa6.95□□□□□ -1.3
TRAPPC11-208ENST00000511955 CNPY4Q8N129 248 aa6.95□□□□□ -1.3
TRAPPC11-208ENST00000511955 SPINK5Q9NQ38 1064 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC11-208ENST00000511955 MYT1LQ9UL68 1186 aa6.94□□□□□ -1.3
TRAPPC11-208ENST00000511955 EPRSP07814 1512 aaKnown RBP6.94□□□□□ -1.3
TRAPPC11-208ENST00000511955 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
TRAPPC11-208ENST00000511955 WDR7Q9Y4E6 1490 aa6.94□□□□□ -1.3
TRAPPC11-208ENST00000511955 MAPKBP1O60336 1514 aa6.93□□□□□ -1.3
TRAPPC11-208ENST00000511955 CAPN15O75808 1086 aa6.93□□□□□ -1.3
TRAPPC11-208ENST00000511955 RETREG2Q8NC44 543 aa6.93□□□□□ -1.3
TRAPPC11-208ENST00000511955 CASKIN1Q8WXD9 1431 aa6.93□□□□□ -1.3
TRAPPC11-208ENST00000511955 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-208ENST00000511955 CLSPNQ9HAW4 1339 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 VPS8Q8N3P4 1428 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 TSPOAP1O95153 1857 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 ABCC10Q5T3U5 1492 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 SETQ01105 290 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 IRF5Q13568 498 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 DIP2BQ9P265 1576 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 FYCO1Q9BQS8 1478 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 SPDYE4A6NLX3 237 aa6.92□□□□□ -1.3
TRAPPC11-208ENST00000511955 LRRIQ1Q96JM4 1722 aa6.91□□□□□ -1.3
TRAPPC11-208ENST00000511955 ANAPC15P60006 121 aa6.91□□□□□ -1.3
TRAPPC11-208ENST00000511955 SPOCK2Q92563 424 aa6.91□□□□□ -1.3
TRAPPC11-208ENST00000511955 CLUAP1Q96AJ1 413 aa6.91□□□□□ -1.3
TRAPPC11-208ENST00000511955 ACIN1Q9UKV3 1341 aaKnown RBP6.9□□□□□ -1.3
TRAPPC11-208ENST00000511955 MTUS2Q5JR59 1369 aa6.9□□□□□ -1.3
TRAPPC11-208ENST00000511955 KIF13AQ9H1H9 1805 aa6.9□□□□□ -1.3
TRAPPC11-208ENST00000511955 KCNV2Q8TDN2 545 aa6.9□□□□□ -1.31
TRAPPC11-208ENST00000511955 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.31
TRAPPC11-208ENST00000511955 POLA2Q14181 598 aa6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 CD109Q6YHK3 1445 aa6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 NOL8Q76FK4 1167 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 ZNF777Q9ULD5 760 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 MAGI3Q5TCQ9 1506 aa6.89□□□□□ -1.31
TRAPPC11-208ENST00000511955 CCDC18Q5T9S5 1454 aa6.88□□□□□ -1.31
TRAPPC11-208ENST00000511955 MKRN4PQ13434 485 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-208ENST00000511955 KIF14Q15058 1648 aa6.88□□□□□ -1.31
TRAPPC11-208ENST00000511955 TRAK2O60296 914 aa6.87□□□□□ -1.31
TRAPPC11-208ENST00000511955 TROQ12816 1431 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-208ENST00000511955 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-208ENST00000511955 HS6ST3Q8IZP7 471 aa6.87□□□□□ -1.31
TRAPPC11-208ENST00000511955 TTC37Q6PGP7 1564 aa6.86□□□□□ -1.31
TRAPPC11-208ENST00000511955 LOC102724159A0A0B4J2E5 919 aa6.86□□□□□ -1.31
TRAPPC11-208ENST00000511955 PWP2Q15269 919 aaKnown RBP6.86□□□□□ -1.31
TRAPPC11-208ENST00000511955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRAPPC11-208ENST00000511955 MAFGO15525 162 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 BRD1O95696 1058 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 EXOC8Q8IYI6 725 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 TIAM1Q13009 1591 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 FAM50AQ14320 339 aaKnown RBP6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 BARGINQ6ZT62 677 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 GPATCH11Q8N954 259 aa6.85□□□□□ -1.31
TRAPPC11-208ENST00000511955 RAPGEF3O95398 923 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 PROM2Q8N271 834 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 RIPOR2Q9Y4F9 1068 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 GTPBP6O43824 516 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 FAM43BQ6ZT52 329 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 ANKRD13AQ8IZ07 590 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 MAP3K4Q9Y6R4 1608 aa6.84□□□□□ -1.31
TRAPPC11-208ENST00000511955 CFDP1Q9UEE9 299 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 ZBTB12Q9Y330 459 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 GLI2P10070 1586 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 LRRC9Q6ZRR7 1453 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 CCNB3Q8WWL7 1395 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 ABCA9Q8IUA7 1624 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 ZNF644Q9H582 1327 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 UNCXA6NJT0 531 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 HSP90AB4PQ58FF6 505 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 DNAJC2Q99543 621 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms