RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
NR1I3-230ENST00000511944 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
NR1I3-230ENST00000511944 DAPK1P53355 1430 aa13.59□□□□□ -0.23
NR1I3-230ENST00000511944 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
NR1I3-230ENST00000511944 PYGBP11216 843 aa13.59□□□□□ -0.23
NR1I3-230ENST00000511944 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
NR1I3-230ENST00000511944 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
NR1I3-230ENST00000511944 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
NR1I3-230ENST00000511944 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
NR1I3-230ENST00000511944 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-230ENST00000511944 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-230ENST00000511944 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
NR1I3-230ENST00000511944 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
NR1I3-230ENST00000511944 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
NR1I3-230ENST00000511944 ABCC5O15440 1437 aa13.56□□□□□ -0.24
NR1I3-230ENST00000511944 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
NR1I3-230ENST00000511944 SAMD9LQ8IVG5 1584 aa13.55□□□□□ -0.24
NR1I3-230ENST00000511944 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
NR1I3-230ENST00000511944 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
NR1I3-230ENST00000511944 GLI2P10070 1586 aa13.54□□□□□ -0.24
NR1I3-230ENST00000511944 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
NR1I3-230ENST00000511944 RGL2O15211 777 aa13.54□□□□□ -0.24
NR1I3-230ENST00000511944 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
NR1I3-230ENST00000511944 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
NR1I3-230ENST00000511944 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
NR1I3-230ENST00000511944 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
NR1I3-230ENST00000511944 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
NR1I3-230ENST00000511944 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
NR1I3-230ENST00000511944 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NR1I3-230ENST00000511944 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
NR1I3-230ENST00000511944 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
NR1I3-230ENST00000511944 ABCC1P33527 1531 aa13.52□□□□□ -0.25
NR1I3-230ENST00000511944 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NR1I3-230ENST00000511944 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
NR1I3-230ENST00000511944 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
NR1I3-230ENST00000511944 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-230ENST00000511944 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
NR1I3-230ENST00000511944 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
NR1I3-230ENST00000511944 FANCAO15360 1455 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 MAP3K13O43283 966 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 ITGAEP38570 1179 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 NEO1Q92859 1461 aa13.48□□□□□ -0.25
NR1I3-230ENST00000511944 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
NR1I3-230ENST00000511944 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
NR1I3-230ENST00000511944 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NR1I3-230ENST00000511944 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-230ENST00000511944 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
NR1I3-230ENST00000511944 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
NR1I3-230ENST00000511944 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NR1I3-230ENST00000511944 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
NR1I3-230ENST00000511944 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
NR1I3-230ENST00000511944 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-230ENST00000511944 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
NR1I3-230ENST00000511944 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
NR1I3-230ENST00000511944 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
NR1I3-230ENST00000511944 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
NR1I3-230ENST00000511944 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
NR1I3-230ENST00000511944 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
NR1I3-230ENST00000511944 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
NR1I3-230ENST00000511944 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
NR1I3-230ENST00000511944 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
NR1I3-230ENST00000511944 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 KDM5CP41229 1560 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-230ENST00000511944 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
NR1I3-230ENST00000511944 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
NR1I3-230ENST00000511944 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NR1I3-230ENST00000511944 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
NR1I3-230ENST00000511944 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
NR1I3-230ENST00000511944 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
NR1I3-230ENST00000511944 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
NR1I3-230ENST00000511944 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
NR1I3-230ENST00000511944 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
NR1I3-230ENST00000511944 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
NR1I3-230ENST00000511944 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
NR1I3-230ENST00000511944 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
NR1I3-230ENST00000511944 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
NR1I3-230ENST00000511944 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
NR1I3-230ENST00000511944 KDM6BO15054 1643 aa13.33□□□□□ -0.28
NR1I3-230ENST00000511944 GABBR2O75899 941 aa13.33□□□□□ -0.28
NR1I3-230ENST00000511944 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
NR1I3-230ENST00000511944 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
NR1I3-230ENST00000511944 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NR1I3-230ENST00000511944 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
NR1I3-230ENST00000511944 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
NR1I3-230ENST00000511944 UNC13BO14795 1591 aa13.32□□□□□ -0.28
NR1I3-230ENST00000511944 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
NR1I3-230ENST00000511944 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
NR1I3-230ENST00000511944 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
NR1I3-230ENST00000511944 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
NR1I3-230ENST00000511944 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
NR1I3-230ENST00000511944 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
NR1I3-230ENST00000511944 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
NR1I3-230ENST00000511944 PZPP20742 1482 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms