RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ANO8Q9HCE9 1232 aaPredicted RBP7.28□□□□□ -1.24
USP38-203ENST00000511739 HDAC5Q9UQL6 1122 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 TOPBP1Q92547 1522 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 LRRC9Q6ZRR7 1453 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 RAD54L2Q9Y4B4 1467 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 RRBP1Q9P2E9 1410 aaKnown RBP7.28□□□□□ -1.24
USP38-203ENST00000511739 GPATCH3Q96I76 525 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 STK31Q9BXU1 1019 aa7.28□□□□□ -1.24
USP38-203ENST00000511739 SPAG9O60271 1321 aaKnown RBP7.27□□□□□ -1.24
USP38-203ENST00000511739 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.24
USP38-203ENST00000511739 HSP90B1P14625 803 aaKnown RBP7.27□□□□□ -1.25
USP38-203ENST00000511739 TPM4P67936 248 aa7.27□□□□□ -1.25
USP38-203ENST00000511739 CREBRFQ8IUR6 639 aa7.27□□□□□ -1.25
USP38-203ENST00000511739 ANKRD30AQ9BXX3 1397 aa7.27□□□□□ -1.25
USP38-203ENST00000511739 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
USP38-203ENST00000511739 NGDNQ8NEJ9 315 aaKnown RBP7.27□□□□□ -1.25
USP38-203ENST00000511739 EVA1CP58658 441 aa7.27□□□□□ -1.25
USP38-203ENST00000511739 ARAP1Q96P48 1450 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 FBXO3Q9UK99 471 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 GRIN2BQ13224 1484 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 MAP3K1Q13233 1512 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
USP38-203ENST00000511739 POLA1P09884 1462 aaPredicted RBP7.25□□□□□ -1.25
USP38-203ENST00000511739 RAD21O60216 631 aa7.25□□□□□ -1.25
USP38-203ENST00000511739 CUL7Q14999 1698 aa7.25□□□□□ -1.25
USP38-203ENST00000511739 MSNP26038 577 aaKnown RBP7.25□□□□□ -1.25
USP38-203ENST00000511739 JPH4Q96JJ6 628 aa7.25□□□□□ -1.25
USP38-203ENST00000511739 NOL10Q9BSC4 688 aaKnown RBP7.25□□□□□ -1.25
USP38-203ENST00000511739 MRC2Q9UBG0 1479 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP38-203ENST00000511739 FGD6Q6ZV73 1430 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 MPHOSPH9Q99550 1183 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 MYOM3Q5VTT5 1437 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 AMPHP49418 695 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 LTV1Q96GA3 475 aaPredicted RBP7.24□□□□□ -1.25
USP38-203ENST00000511739 IFT140Q96RY7 1462 aa7.24□□□□□ -1.25
USP38-203ENST00000511739 U2AF1L5P0DN76 240 aaPredicted RBP7.23□□□□□ -1.25
USP38-203ENST00000511739 U2AF1Q01081 240 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP38-203ENST00000511739 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
USP38-203ENST00000511739 AQRO60306 1485 aaKnown RBP eCLIP7.23□□□□□ -1.256e-6■□□□□ 10.5
USP38-203ENST00000511739 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
USP38-203ENST00000511739 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
USP38-203ENST00000511739 FBXW7Q969H0 707 aa7.22□□□□□ -1.25
USP38-203ENST00000511739 TIAM1Q13009 1591 aa7.22□□□□□ -1.25
USP38-203ENST00000511739 TRIM6-TRIM34B2RNG4 842 aa7.22□□□□□ -1.25
USP38-203ENST00000511739 TPM3P06753 285 aa7.22□□□□□ -1.25
USP38-203ENST00000511739 PES1O00541 588 aaKnown RBP7.22□□□□□ -1.25
USP38-203ENST00000511739 EFCAB2Q5VUJ9 269 aa7.21□□□□□ -1.25
USP38-203ENST00000511739 GOLGA6L1Q8N7Z2 621 aa7.21□□□□□ -1.25
USP38-203ENST00000511739 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
USP38-203ENST00000511739 HMMRO75330 724 aa7.21□□□□□ -1.26
USP38-203ENST00000511739 SLC4A10Q6U841 1118 aa7.21□□□□□ -1.26
USP38-203ENST00000511739 NUTM2FA1L443 756 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 ITPRIPQ8IWB1 547 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 EHBP1L1Q8N3D4 1523 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 UACAQ9BZF9 1416 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 USP35Q9P2H5 1018 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 PHLDB1Q86UU1 1377 aa7.2□□□□□ -1.26
USP38-203ENST00000511739 NESP48681 1621 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 SF3A1Q15459 793 aaKnown RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 TPD52L1Q16890 204 aaPredicted RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 KIF3AQ9Y496 699 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 PKD2Q13563 968 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 B4GALNT3Q6L9W6 998 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 SYTL4Q96C24 671 aaPredicted RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 SYAP1Q96A49 352 aaPredicted RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 CCDC43Q96MW1 224 aaKnown RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 MIA2Q96PC5 1412 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 TERF2IPQ9NYB0 399 aa7.19□□□□□ -1.26
USP38-203ENST00000511739 DHX16O60231 1041 aaKnown RBP7.19□□□□□ -1.26
USP38-203ENST00000511739 NCOA2Q15596 1464 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 PTPRGP23470 1445 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 TSR1Q2NL82 804 aaKnown RBP7.18□□□□□ -1.26
USP38-203ENST00000511739 NUP155O75694 1391 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 HSPA5P11021 654 aaKnown RBP7.18□□□□□ -1.26
USP38-203ENST00000511739 C1orf141Q5JVX7 400 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 SAMD1Q6SPF0 538 aaPredicted RBP7.18□□□□□ -1.26
USP38-203ENST00000511739 SYNE3Q6ZMZ3 975 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 VPS37DQ86XT2 251 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 R3HCC1Q9Y3T6 440 aaKnown RBP7.18□□□□□ -1.26
USP38-203ENST00000511739 HECW1Q76N89 1606 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 ROCK2O75116 1388 aaKnown RBP7.18□□□□□ -1.26
USP38-203ENST00000511739 TPM2P07951 284 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 GBP4Q96PP9 640 aa7.18□□□□□ -1.26
USP38-203ENST00000511739 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
USP38-203ENST00000511739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP38-203ENST00000511739 PPP4R2Q9NY27 417 aa7.17□□□□□ -1.26
USP38-203ENST00000511739 CCAR1Q8IX12 1150 aaKnown RBP7.17□□□□□ -1.26
USP38-203ENST00000511739 SF3B2Q13435 895 aaKnown RBP7.17□□□□□ -1.26
USP38-203ENST00000511739 FOXD1Q16676 465 aa7.17□□□□□ -1.26
USP38-203ENST00000511739 RWDD1Q9H446 243 aaPredicted RBP7.17□□□□□ -1.26
USP38-203ENST00000511739 PTMSP20962 102 aa7.16□□□□□ -1.26
USP38-203ENST00000511739 PAF1Q8N7H5 531 aa7.16□□□□□ -1.26
USP38-203ENST00000511739 LMOD3Q0VAK6 560 aa7.16□□□□□ -1.26
USP38-203ENST00000511739 TTC5Q8N0Z6 440 aa7.16□□□□□ -1.26
USP38-203ENST00000511739 SUPT6HQ7KZ85 1726 aaKnown RBP7.15□□□□□ -1.26
USP38-203ENST00000511739 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
USP38-203ENST00000511739 KIF16BQ96L93 1317 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms