RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 KTN1Q86UP2 1357 aaKnown RBP25.83■■□□□ 1.73
LIN54-209ENST00000510557 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.72
LIN54-209ENST00000510557 IPO9Q96P70 1041 aaKnown RBP25.81■■□□□ 1.72
LIN54-209ENST00000510557 SALL2Q9Y467 1007 aaPredicted RBP25.81■■□□□ 1.72
LIN54-209ENST00000510557 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
LIN54-209ENST00000510557 HNRNPMP52272 730 aaKnown RBP eCLIP25.78■■□□□ 1.72
LIN54-209ENST00000510557 NUDCQ9Y266 331 aa25.77■■□□□ 1.72
LIN54-209ENST00000510557 ZBTB47Q9UFB7 747 aaPredicted RBP25.76■■□□□ 1.71
LIN54-209ENST00000510557 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
LIN54-209ENST00000510557 TMC1Q8TDI8 760 aa25.75■■□□□ 1.71
LIN54-209ENST00000510557 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
LIN54-209ENST00000510557 PNISRQ8TF01 805 aaKnown RBP25.74■■□□□ 1.71
LIN54-209ENST00000510557 RALBP1Q15311 655 aa25.73■■□□□ 1.71
LIN54-209ENST00000510557 FAM135AQ9P2D6 1515 aa25.73■■□□□ 1.71
LIN54-209ENST00000510557 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
LIN54-209ENST00000510557 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
LIN54-209ENST00000510557 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
LIN54-209ENST00000510557 ST20-MTHFSA0A0A6YYL1 179 aa25.71■■□□□ 1.71
LIN54-209ENST00000510557 BRD4O60885 1362 aaPredicted RBP25.7■■□□□ 1.71
LIN54-209ENST00000510557 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.71
LIN54-209ENST00000510557 MAST1Q9Y2H9 1570 aa25.69■■□□□ 1.7
LIN54-209ENST00000510557 MYBBP1AQ9BQG0 1328 aaKnown RBP25.68■■□□□ 1.7
LIN54-209ENST00000510557 CCDC144AA2RUR9 1427 aa25.67■■□□□ 1.7
LIN54-209ENST00000510557 IL27Q8NEV9 243 aa25.67■■□□□ 1.7
LIN54-209ENST00000510557 E9PCH4 1651 aa25.65■■□□□ 1.7
LIN54-209ENST00000510557 CNGB1Q14028 1251 aaPredicted RBP25.65■■□□□ 1.7
LIN54-209ENST00000510557 LRPPRCP42704 1394 aaKnown RBP25.65■■□□□ 1.7
LIN54-209ENST00000510557 UNC13BO14795 1591 aa25.64■■□□□ 1.69
LIN54-209ENST00000510557 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
LIN54-209ENST00000510557 PLEKHH2Q8IVE3 1493 aa25.63■■□□□ 1.69
LIN54-209ENST00000510557 TRPM1Q7Z4N2 1603 aa25.62■■□□□ 1.69
LIN54-209ENST00000510557 CCDC136Q96JN2 1154 aa25.62■■□□□ 1.69
LIN54-209ENST00000510557 ARHGAP5Q13017 1502 aa25.6■■□□□ 1.69
LIN54-209ENST00000510557 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
LIN54-209ENST00000510557 LAMC1P11047 1609 aa25.58■■□□□ 1.69
LIN54-209ENST00000510557 PLXNC1O60486 1568 aa25.58■■□□□ 1.69
LIN54-209ENST00000510557 GPRASP1Q5JY77 1395 aa25.58■■□□□ 1.69
LIN54-209ENST00000510557 WASHC2CQ9Y4E1 1318 aa25.56■■□□□ 1.68
LIN54-209ENST00000510557 RTN4Q9NQC3 1192 aaKnown RBP25.56■■□□□ 1.68
LIN54-209ENST00000510557 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
LIN54-209ENST00000510557 NLRP13Q86W25 1043 aa25.54■■□□□ 1.68
LIN54-209ENST00000510557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.54■■□□□ 1.686e-13■■■■□ 25
LIN54-209ENST00000510557 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
LIN54-209ENST00000510557 EIF2AK4Q9P2K8 1649 aaKnown RBP25.54■■□□□ 1.68
LIN54-209ENST00000510557 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
LIN54-209ENST00000510557 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
LIN54-209ENST00000510557 MYO5CQ9NQX4 1742 aa25.53■■□□□ 1.68
LIN54-209ENST00000510557 PARD3Q8TEW0 1356 aa25.52■■□□□ 1.68
LIN54-209ENST00000510557 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
LIN54-209ENST00000510557 ATP10AO60312 1499 aa25.52■■□□□ 1.68
LIN54-209ENST00000510557 PLA2R1Q13018 1463 aa25.51■■□□□ 1.67
LIN54-209ENST00000510557 PDE3BQ13370 1112 aa25.5■■□□□ 1.67
LIN54-209ENST00000510557 A2MP01023 1474 aa25.5■■□□□ 1.67
LIN54-209ENST00000510557 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
LIN54-209ENST00000510557 ABCC2Q92887 1545 aa25.49■■□□□ 1.67
LIN54-209ENST00000510557 ERBINQ96RT1 1412 aa25.49■■□□□ 1.67
LIN54-209ENST00000510557 CHD1O14646 1710 aa25.49■■□□□ 1.67
LIN54-209ENST00000510557 RGL3Q3MIN7 710 aa25.48■■□□□ 1.67
LIN54-209ENST00000510557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.67
LIN54-209ENST00000510557 INSRP06213 1382 aa25.47■■□□□ 1.67
LIN54-209ENST00000510557 COL17A1Q9UMD9 1497 aaPredicted RBP25.47■■□□□ 1.67
LIN54-209ENST00000510557 MAGI2Q86UL8 1455 aa25.46■■□□□ 1.67
LIN54-209ENST00000510557 NEFMP07197 916 aa25.45■■□□□ 1.66
LIN54-209ENST00000510557 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
LIN54-209ENST00000510557 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
LIN54-209ENST00000510557 UBE2Q2Q8WVN8 375 aa25.44■■□□□ 1.66
LIN54-209ENST00000510557 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.44■■□□□ 1.66
LIN54-209ENST00000510557 ZMYM4Q5VZL5 1548 aa25.43■■□□□ 1.66
LIN54-209ENST00000510557 TMF1P82094 1093 aa25.41■■□□□ 1.66
LIN54-209ENST00000510557 PLCH2O75038 1416 aa25.4■■□□□ 1.66
LIN54-209ENST00000510557 TESK2Q96S53 571 aa25.4■■□□□ 1.66
LIN54-209ENST00000510557 RRP1P56182 461 aaKnown RBP25.39■■□□□ 1.65
LIN54-209ENST00000510557 EFCAB2Q5VUJ9 269 aa25.39■■□□□ 1.65
LIN54-209ENST00000510557 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
LIN54-209ENST00000510557 NPM2Q86SE8 214 aaKnown RBP25.38■■□□□ 1.65
LIN54-209ENST00000510557 LAS1LQ9Y4W2 734 aaKnown RBP25.38■■□□□ 1.65
LIN54-209ENST00000510557 RCAN3Q9UKA8 241 aa25.37■■□□□ 1.65
LIN54-209ENST00000510557 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
LIN54-209ENST00000510557 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
LIN54-209ENST00000510557 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
LIN54-209ENST00000510557 PANK3Q9H999 370 aa25.33■■□□□ 1.64
LIN54-209ENST00000510557 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
LIN54-209ENST00000510557 UHRF1BP1LA0JNW5 1464 aa25.31■■□□□ 1.64
LIN54-209ENST00000510557 SENP3-EIF4A1A0A087X0R7 540 aa25.3■■□□□ 1.64
LIN54-209ENST00000510557 BLMP54132 1417 aaPredicted RBP25.3■■□□□ 1.64
LIN54-209ENST00000510557 ABCC1P33527 1531 aa25.3■■□□□ 1.64
LIN54-209ENST00000510557 CC2D1BQ5T0F9 858 aaKnown RBP25.29■■□□□ 1.64
LIN54-209ENST00000510557 ZCCHC11Q5TAX3 1644 aaKnown RBP25.28■■□□□ 1.64
LIN54-209ENST00000510557 RTEL1-TNFRSF6BF6WH68 1400 aa25.28■■□□□ 1.64
LIN54-209ENST00000510557 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
LIN54-209ENST00000510557 PDE4AP27815 886 aa25.26■■□□□ 1.63
LIN54-209ENST00000510557 CDCA8Q53HL2 280 aa25.26■■□□□ 1.63
LIN54-209ENST00000510557 ARAP3Q8WWN8 1544 aa25.25■■□□□ 1.63
LIN54-209ENST00000510557 MS4A1P11836 297 aa25.23■■□□□ 1.63
LIN54-209ENST00000510557 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
LIN54-209ENST00000510557 TRPM2O94759 1503 aa25.23■■□□□ 1.63
LIN54-209ENST00000510557 EXOC6Q8TAG9 804 aa25.23■■□□□ 1.63
LIN54-209ENST00000510557 MADDQ8WXG6 1647 aa25.22■■□□□ 1.63
LIN54-209ENST00000510557 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
LIN54-209ENST00000510557 SPAG9O60271 1321 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms