RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 RNF17Q9BXT8 1623 aaKnown RBP30.76■■■□□ 2.52
HOXC6-204ENST00000509328 MROH2AA6NES4 1674 aa30.76■■■□□ 2.51
HOXC6-204ENST00000509328 CLTCQ00610 1675 aaKnown RBP30.75■■■□□ 2.51
HOXC6-204ENST00000509328 ITGAEP38570 1179 aa30.74■■■□□ 2.51
HOXC6-204ENST00000509328 ROCK1Q13464 1354 aa30.73■■■□□ 2.51
HOXC6-204ENST00000509328 FAM135AQ9P2D6 1515 aa30.72■■■□□ 2.51
HOXC6-204ENST00000509328 C3P01024 1663 aa30.71■■■□□ 2.51
HOXC6-204ENST00000509328 PLPPR3Q6T4P5 718 aa30.67■■■□□ 2.5
HOXC6-204ENST00000509328 KDM5DQ9BY66 1539 aa30.67■■■□□ 2.5
HOXC6-204ENST00000509328 MROH1Q8NDA8 1641 aa30.66■■■□□ 2.5
HOXC6-204ENST00000509328 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
HOXC6-204ENST00000509328 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
HOXC6-204ENST00000509328 ZC3H13Q5T200 1668 aaKnown RBP30.64■■■□□ 2.5
HOXC6-204ENST00000509328 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.49
HOXC6-204ENST00000509328 ZMYM3Q14202 1370 aa30.63■■■□□ 2.49
HOXC6-204ENST00000509328 PRDM15P57071 1507 aaPredicted RBP30.62■■■□□ 2.49
HOXC6-204ENST00000509328 WASHC2CQ9Y4E1 1318 aa30.61■■■□□ 2.49
HOXC6-204ENST00000509328 SETD1BQ9UPS6 1966 aaKnown RBP30.6■■■□□ 2.49
HOXC6-204ENST00000509328 CEP152O94986 1710 aa30.58■■■□□ 2.49
HOXC6-204ENST00000509328 ABCC3O15438 1527 aa30.57■■■□□ 2.49
HOXC6-204ENST00000509328 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
HOXC6-204ENST00000509328 KANK1Q14678 1352 aa30.53■■■□□ 2.48
HOXC6-204ENST00000509328 GCC2Q8IWJ2 1684 aa30.52■■■□□ 2.48
HOXC6-204ENST00000509328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.52■■■□□ 2.48
HOXC6-204ENST00000509328 NPATQ14207 1427 aa30.52■■■□□ 2.48
HOXC6-204ENST00000509328 CAMSAP1Q5T5Y3 1602 aa30.51■■■□□ 2.48
HOXC6-204ENST00000509328 VWDEQ8N2E2 1590 aa30.5■■■□□ 2.47
HOXC6-204ENST00000509328 UNC13BO14795 1591 aa30.49■■■□□ 2.47
HOXC6-204ENST00000509328 PZPP20742 1482 aa30.49■■■□□ 2.47
HOXC6-204ENST00000509328 NAIPQ13075 1403 aa30.47■■■□□ 2.47
HOXC6-204ENST00000509328 LMTK3Q96Q04 1460 aa30.46■■■□□ 2.47
HOXC6-204ENST00000509328 LMTK2Q8IWU2 1503 aa30.45■■■□□ 2.47
HOXC6-204ENST00000509328 HFM1A2PYH4 1435 aa30.45■■■□□ 2.46
HOXC6-204ENST00000509328 CFAP65Q6ZU64 1925 aaKnown RBP30.42■■■□□ 2.46
HOXC6-204ENST00000509328 UHRF1BP1Q6BDS2 1440 aa30.42■■■□□ 2.46
HOXC6-204ENST00000509328 ARHGAP31Q2M1Z3 1444 aa30.39■■■□□ 2.46
HOXC6-204ENST00000509328 MYO3AQ8NEV4 1616 aa30.39■■■□□ 2.46
HOXC6-204ENST00000509328 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
HOXC6-204ENST00000509328 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
HOXC6-204ENST00000509328 TET3O43151 1660 aa30.36■■■□□ 2.45
HOXC6-204ENST00000509328 EFCAB6Q5THR3 1501 aa30.36■■■□□ 2.45
HOXC6-204ENST00000509328 TNRQ92752 1358 aa30.35■■■□□ 2.45
HOXC6-204ENST00000509328 SPATA31D1Q6ZQQ2 1576 aa30.35■■■□□ 2.45
HOXC6-204ENST00000509328 ZNF142P52746 1687 aaPredicted RBP30.33■■■□□ 2.45
HOXC6-204ENST00000509328 ERVK-7P63135 1459 aa30.33■■■□□ 2.45
HOXC6-204ENST00000509328 NUP155O75694 1391 aa30.32■■■□□ 2.44
HOXC6-204ENST00000509328 CEP170BQ9Y4F5 1589 aaPredicted RBP30.28■■■□□ 2.44
HOXC6-204ENST00000509328 HSPA2P54652 639 aa30.28■■■□□ 2.44
HOXC6-204ENST00000509328 RPRD2Q5VT52 1461 aaKnown RBP30.27■■■□□ 2.44
HOXC6-204ENST00000509328 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
HOXC6-204ENST00000509328 NLRP1Q9C000 1473 aa30.25■■■□□ 2.43
HOXC6-204ENST00000509328 E9PCH4 1651 aa30.24■■■□□ 2.43
HOXC6-204ENST00000509328 SETD5Q9C0A6 1442 aa30.21■■■□□ 2.43
HOXC6-204ENST00000509328 NOS1P29475 1434 aa30.19■■■□□ 2.42
HOXC6-204ENST00000509328 TRIM52Q96A61 297 aa30.18■■■□□ 2.42
HOXC6-204ENST00000509328 SYNMO15061 1565 aa30.17■■■□□ 2.42
HOXC6-204ENST00000509328 STRCQ7RTU9 1775 aa30.15■■■□□ 2.42
HOXC6-204ENST00000509328 UGGT1Q9NYU2 1555 aa30.15■■■□□ 2.42
HOXC6-204ENST00000509328 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
HOXC6-204ENST00000509328 UBR1Q8IWV7 1749 aa30.11■■■□□ 2.41
HOXC6-204ENST00000509328 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
HOXC6-204ENST00000509328 PLA2R1Q13018 1463 aa30.1■■■□□ 2.41
HOXC6-204ENST00000509328 RAB3GAP2Q9H2M9 1393 aa30.09■■■□□ 2.41
HOXC6-204ENST00000509328 SPHKAPQ2M3C7 1700 aa30.08■■■□□ 2.41
HOXC6-204ENST00000509328 KDM5AP29375 1690 aaKnown RBP30.08■■■□□ 2.41
HOXC6-204ENST00000509328 THEMISQ8N1K5 641 aaPredicted RBP30.08■■■□□ 2.41
HOXC6-204ENST00000509328 SLC52A1Q9NWF4 448 aa30.07■■■□□ 2.4
HOXC6-204ENST00000509328 IDI1Q13907 227 aa30.05■■■□□ 2.4
HOXC6-204ENST00000509328 SLC4A1APQ9BWU0 796 aaKnown RBP30.05■■■□□ 2.4
HOXC6-204ENST00000509328 POLR1AO95602 1720 aaPredicted RBP30.02■■■□□ 2.4
HOXC6-204ENST00000509328 PKD2Q13563 968 aa30.02■■■□□ 2.4
HOXC6-204ENST00000509328 PTPRTO14522 1441 aa30.01■■■□□ 2.39
HOXC6-204ENST00000509328 DMRT2Q9Y5R5 561 aa30■■■□□ 2.39
HOXC6-204ENST00000509328 ADGRB3O60242 1522 aa30■■■□□ 2.39
HOXC6-204ENST00000509328 HRCP23327 699 aa29.99■■■□□ 2.39
HOXC6-204ENST00000509328 STAG3Q9UJ98 1225 aa29.99■■■□□ 2.39
HOXC6-204ENST00000509328 MYO5BQ9ULV0 1848 aa29.98■■■□□ 2.39
HOXC6-204ENST00000509328 NCKAP5LQ9HCH0 1330 aa29.97■■■□□ 2.39
HOXC6-204ENST00000509328 MPHOSPH9Q99550 1183 aa29.97■■■□□ 2.39
HOXC6-204ENST00000509328 TRPM2O94759 1503 aa29.96■■■□□ 2.39
HOXC6-204ENST00000509328 TMEM131LA2VDJ0 1609 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 ANKLE2Q86XL3 938 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 SLIT1O75093 1534 aa29.94■■■□□ 2.38
HOXC6-204ENST00000509328 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
HOXC6-204ENST00000509328 ARHGAP23Q9P227 1491 aa29.93■■■□□ 2.38
HOXC6-204ENST00000509328 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
HOXC6-204ENST00000509328 CLTCL1P53675 1640 aa29.9■■■□□ 2.38
HOXC6-204ENST00000509328 TMEM2Q9UHN6 1383 aa29.9■■■□□ 2.38
HOXC6-204ENST00000509328 KIF1BO60333 1816 aa29.87■■■□□ 2.37
HOXC6-204ENST00000509328 FOXD1Q16676 465 aa29.86■■■□□ 2.37
HOXC6-204ENST00000509328 MED14O60244 1454 aa29.86■■■□□ 2.37
HOXC6-204ENST00000509328 SCAF11Q99590 1463 aaKnown RBP29.86■■■□□ 2.37
HOXC6-204ENST00000509328 CHGAP10645 457 aaKnown RBP29.85■■■□□ 2.37
HOXC6-204ENST00000509328 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
HOXC6-204ENST00000509328 IQGAP1P46940 1657 aa29.84■■■□□ 2.37
HOXC6-204ENST00000509328 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
HOXC6-204ENST00000509328 NPHP4O75161 1426 aaPredicted RBP29.82■■■□□ 2.36
HOXC6-204ENST00000509328 LTKP29376 864 aa29.81■■■□□ 2.36
HOXC6-204ENST00000509328 ZFYVE9O95405 1425 aa29.78■■■□□ 2.36
HOXC6-204ENST00000509328 RIMS2Q9UQ26 1411 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms