RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 KDM5DQ9BY66 1539 aa23.08■■□□□ 1.28
UBE2D3-228ENST00000508974 DNMT1P26358 1616 aaKnown RBP23.07■■□□□ 1.28
UBE2D3-228ENST00000508974 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
UBE2D3-228ENST00000508974 ABCC5O15440 1437 aa23.05■■□□□ 1.28
UBE2D3-228ENST00000508974 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-228ENST00000508974 EIF2AK4Q9P2K8 1649 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-228ENST00000508974 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-228ENST00000508974 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-228ENST00000508974 DAPK1P53355 1430 aa23.03■■□□□ 1.28
UBE2D3-228ENST00000508974 WASHC2CQ9Y4E1 1318 aa23.03■■□□□ 1.28
UBE2D3-228ENST00000508974 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
UBE2D3-228ENST00000508974 SHANK2Q9UPX8 1470 aa23.02■■□□□ 1.28
UBE2D3-228ENST00000508974 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
UBE2D3-228ENST00000508974 CEP152O94986 1710 aa23.01■■□□□ 1.27
UBE2D3-228ENST00000508974 DUOX2Q9NRD8 1548 aa23.01■■□□□ 1.27
UBE2D3-228ENST00000508974 FAM135AQ9P2D6 1515 aa22.99■■□□□ 1.27
UBE2D3-228ENST00000508974 RRP7BPQ9NSQ0 103 aa22.99■■□□□ 1.27
UBE2D3-228ENST00000508974 KIF15Q9NS87 1388 aa22.99■■□□□ 1.27
UBE2D3-228ENST00000508974 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
UBE2D3-228ENST00000508974 ZC3H13Q5T200 1668 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-228ENST00000508974 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
UBE2D3-228ENST00000508974 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
UBE2D3-228ENST00000508974 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
UBE2D3-228ENST00000508974 PIAS4Q8N2W9 510 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-228ENST00000508974 NCOA1Q15788 1441 aa22.97■■□□□ 1.27
UBE2D3-228ENST00000508974 PZPP20742 1482 aa22.97■■□□□ 1.27
UBE2D3-228ENST00000508974 PPARGC1BQ86YN6 1023 aaKnown RBP22.96■■□□□ 1.27
UBE2D3-228ENST00000508974 ABCC3O15438 1527 aa22.96■■□□□ 1.27
UBE2D3-228ENST00000508974 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
UBE2D3-228ENST00000508974 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
UBE2D3-228ENST00000508974 TNRQ92752 1358 aa22.93■■□□□ 1.26
UBE2D3-228ENST00000508974 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
UBE2D3-228ENST00000508974 A2ML1A8K2U0 1454 aa22.91■■□□□ 1.26
UBE2D3-228ENST00000508974 NCKAP5LQ9HCH0 1330 aa22.9■■□□□ 1.26
UBE2D3-228ENST00000508974 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
UBE2D3-228ENST00000508974 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
UBE2D3-228ENST00000508974 FBXO41Q8TF61 875 aa22.89■■□□□ 1.25
UBE2D3-228ENST00000508974 PTPRTO14522 1441 aa22.89■■□□□ 1.25
UBE2D3-228ENST00000508974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.88■■□□□ 1.25
UBE2D3-228ENST00000508974 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
UBE2D3-228ENST00000508974 CERKQ8TCT0 537 aa22.87■■□□□ 1.25
UBE2D3-228ENST00000508974 PLA2R1Q13018 1463 aa22.85■■□□□ 1.25
UBE2D3-228ENST00000508974 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-228ENST00000508974 ADGRL2O95490 1459 aa22.83■■□□□ 1.25
UBE2D3-228ENST00000508974 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
UBE2D3-228ENST00000508974 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
UBE2D3-228ENST00000508974 UGGT1Q9NYU2 1555 aa22.81■■□□□ 1.24
UBE2D3-228ENST00000508974 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
UBE2D3-228ENST00000508974 KANK1Q14678 1352 aa22.78■■□□□ 1.24
UBE2D3-228ENST00000508974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.241e-10■■■□□ 14.9
UBE2D3-228ENST00000508974 PKD2Q13563 968 aa22.78■■□□□ 1.24
UBE2D3-228ENST00000508974 ITGAEP38570 1179 aa22.77■■□□□ 1.24
UBE2D3-228ENST00000508974 LTBP4Q8N2S1 1624 aa22.77■■□□□ 1.24
UBE2D3-228ENST00000508974 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
UBE2D3-228ENST00000508974 VWDEQ8N2E2 1590 aa22.74■■□□□ 1.23
UBE2D3-228ENST00000508974 ZNF335Q9H4Z2 1342 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-228ENST00000508974 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
UBE2D3-228ENST00000508974 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
UBE2D3-228ENST00000508974 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
UBE2D3-228ENST00000508974 ARHGAP31Q2M1Z3 1444 aa22.72■■□□□ 1.23
UBE2D3-228ENST00000508974 EFCAB6Q5THR3 1501 aa22.7■■□□□ 1.22
UBE2D3-228ENST00000508974 LMTK2Q8IWU2 1503 aa22.7■■□□□ 1.22
UBE2D3-228ENST00000508974 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
UBE2D3-228ENST00000508974 ANKLE2Q86XL3 938 aa22.68■■□□□ 1.22
UBE2D3-228ENST00000508974 MSH5O43196 834 aa22.67■■□□□ 1.22
UBE2D3-228ENST00000508974 IQGAP1P46940 1657 aa22.66■■□□□ 1.22
UBE2D3-228ENST00000508974 UNC13BO14795 1591 aa22.66■■□□□ 1.22
UBE2D3-228ENST00000508974 SYNMO15061 1565 aa22.65■■□□□ 1.22
UBE2D3-228ENST00000508974 TET3O43151 1660 aa22.64■■□□□ 1.21
UBE2D3-228ENST00000508974 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-228ENST00000508974 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
UBE2D3-228ENST00000508974 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
UBE2D3-228ENST00000508974 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
UBE2D3-228ENST00000508974 MED14O60244 1454 aa22.6■■□□□ 1.21
UBE2D3-228ENST00000508974 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
UBE2D3-228ENST00000508974 E9PCH4 1651 aa22.58■■□□□ 1.2
UBE2D3-228ENST00000508974 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
UBE2D3-228ENST00000508974 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
UBE2D3-228ENST00000508974 SCAF11Q99590 1463 aaKnown RBP22.57■■□□□ 1.2
UBE2D3-228ENST00000508974 NOS1P29475 1434 aa22.57■■□□□ 1.2
UBE2D3-228ENST00000508974 IDI1Q13907 227 aa22.56■■□□□ 1.2
UBE2D3-228ENST00000508974 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
UBE2D3-228ENST00000508974 SLIT1O75093 1534 aa22.56■■□□□ 1.2
UBE2D3-228ENST00000508974 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
UBE2D3-228ENST00000508974 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
UBE2D3-228ENST00000508974 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
UBE2D3-228ENST00000508974 STRCP1A6NGW2 1772 aa22.54■■□□□ 1.2
UBE2D3-228ENST00000508974 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
UBE2D3-228ENST00000508974 LTKP29376 864 aa22.54■■□□□ 1.2
UBE2D3-228ENST00000508974 TXNDC2Q86VQ3 553 aa22.54■■□□□ 1.2
UBE2D3-228ENST00000508974 CPS1P31327 1500 aa22.52■■□□□ 1.2
UBE2D3-228ENST00000508974 NUP155O75694 1391 aa22.51■■□□□ 1.19
UBE2D3-228ENST00000508974 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
UBE2D3-228ENST00000508974 EID1Q9Y6B2 187 aa22.5■■□□□ 1.19
UBE2D3-228ENST00000508974 UBAP1LF5GYI3 381 aa22.49■■□□□ 1.19
UBE2D3-228ENST00000508974 SLC52A1Q9NWF4 448 aa22.46■■□□□ 1.19
UBE2D3-228ENST00000508974 TMEM131LA2VDJ0 1609 aa22.44■■□□□ 1.18
UBE2D3-228ENST00000508974 CHGAP10645 457 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-228ENST00000508974 NAIPQ13075 1403 aa22.43■■□□□ 1.18
UBE2D3-228ENST00000508974 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms