RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 ALKQ9UM73 1620 aa9.48□□□□□ -0.89
AFP-204ENST00000508838 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
AFP-204ENST00000508838 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
AFP-204ENST00000508838 CAMSAP1Q5T5Y3 1602 aa9.46□□□□□ -0.89
AFP-204ENST00000508838 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
AFP-204ENST00000508838 CEP170BQ9Y4F5 1589 aaPredicted RBP9.46□□□□□ -0.9
AFP-204ENST00000508838 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
AFP-204ENST00000508838 PTPRTO14522 1441 aa9.45□□□□□ -0.9
AFP-204ENST00000508838 UHRF1BP1Q6BDS2 1440 aa9.45□□□□□ -0.9
AFP-204ENST00000508838 IQSEC2Q5JU85 1478 aa9.45□□□□□ -0.9
AFP-204ENST00000508838 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
AFP-204ENST00000508838 CEBPAP49715 358 aaPredicted RBP9.44□□□□□ -0.9
AFP-204ENST00000508838 FMN1Q68DA7 1419 aa9.44□□□□□ -0.9
AFP-204ENST00000508838 ATP7AQ04656 1500 aa9.44□□□□□ -0.9
AFP-204ENST00000508838 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
AFP-204ENST00000508838 MLECQ14165 292 aa9.43□□□□□ -0.9
AFP-204ENST00000508838 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
AFP-204ENST00000508838 TCOF1Q13428 1488 aaKnown RBP9.42□□□□□ -0.9
AFP-204ENST00000508838 PLEKHD1A6NEE1 506 aa9.41□□□□□ -0.9
AFP-204ENST00000508838 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
AFP-204ENST00000508838 CHADLQ6NUI6 762 aa9.41□□□□□ -0.9
AFP-204ENST00000508838 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
AFP-204ENST00000508838 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
AFP-204ENST00000508838 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.9
AFP-204ENST00000508838 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
AFP-204ENST00000508838 CD44P16070 742 aaKnown RBP9.4□□□□□ -0.9
AFP-204ENST00000508838 MED1Q15648 1581 aaPredicted RBP9.39□□□□□ -0.91
AFP-204ENST00000508838 AFAP1Q8N556 730 aa9.39□□□□□ -0.91
AFP-204ENST00000508838 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
AFP-204ENST00000508838 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
AFP-204ENST00000508838 NPATQ14207 1427 aa9.39□□□□□ -0.91
AFP-204ENST00000508838 GPATCH8Q9UKJ3 1502 aaKnown RBP9.38□□□□□ -0.91
AFP-204ENST00000508838 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
AFP-204ENST00000508838 ZC3H13Q5T200 1668 aaKnown RBP9.38□□□□□ -0.91
AFP-204ENST00000508838 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
AFP-204ENST00000508838 MROH1Q8NDA8 1641 aa9.37□□□□□ -0.91
AFP-204ENST00000508838 CLIP1P30622 1438 aa9.37□□□□□ -0.91
AFP-204ENST00000508838 PTPRKQ15262 1439 aa9.37□□□□□ -0.91
AFP-204ENST00000508838 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
AFP-204ENST00000508838 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
AFP-204ENST00000508838 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
AFP-204ENST00000508838 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
AFP-204ENST00000508838 RNF17Q9BXT8 1623 aaKnown RBP9.34□□□□□ -0.91
AFP-204ENST00000508838 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
AFP-204ENST00000508838 SOCS7O14512 581 aa9.33□□□□□ -0.92
AFP-204ENST00000508838 CEP152O94986 1710 aa9.33□□□□□ -0.92
AFP-204ENST00000508838 A2MP01023 1474 aa9.33□□□□□ -0.92
AFP-204ENST00000508838 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
AFP-204ENST00000508838 DEPDC5O75140 1603 aa9.32□□□□□ -0.92
AFP-204ENST00000508838 IQGAP1P46940 1657 aa9.32□□□□□ -0.92
AFP-204ENST00000508838 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
AFP-204ENST00000508838 EHBP1L1Q8N3D4 1523 aa9.31□□□□□ -0.92
AFP-204ENST00000508838 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
AFP-204ENST00000508838 A2ML1A8K2U0 1454 aa9.31□□□□□ -0.92
AFP-204ENST00000508838 SYNMO15061 1565 aa9.31□□□□□ -0.92
AFP-204ENST00000508838 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
AFP-204ENST00000508838 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
AFP-204ENST00000508838 UBR1Q8IWV7 1749 aa9.3□□□□□ -0.92
AFP-204ENST00000508838 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
AFP-204ENST00000508838 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
AFP-204ENST00000508838 CROCC2H7BZ55 1655 aa9.29□□□□□ -0.92
AFP-204ENST00000508838 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
AFP-204ENST00000508838 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
AFP-204ENST00000508838 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
AFP-204ENST00000508838 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
AFP-204ENST00000508838 PZPP20742 1482 aa9.28□□□□□ -0.92
AFP-204ENST00000508838 ARHGEF5Q12774 1597 aa9.27□□□□□ -0.93
AFP-204ENST00000508838 EIF2AK4Q9P2K8 1649 aaKnown RBP9.27□□□□□ -0.93
AFP-204ENST00000508838 CPS1P31327 1500 aa9.26□□□□□ -0.93
AFP-204ENST00000508838 MAST1Q9Y2H9 1570 aa9.26□□□□□ -0.93
AFP-204ENST00000508838 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
AFP-204ENST00000508838 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
AFP-204ENST00000508838 ABCC3O15438 1527 aa9.26□□□□□ -0.93
AFP-204ENST00000508838 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
AFP-204ENST00000508838 MED14O60244 1454 aa9.25□□□□□ -0.93
AFP-204ENST00000508838 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
AFP-204ENST00000508838 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
AFP-204ENST00000508838 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
AFP-204ENST00000508838 CCDC141Q6ZP82 1450 aa9.22□□□□□ -0.93
AFP-204ENST00000508838 SHANK2Q9UPX8 1470 aa9.22□□□□□ -0.93
AFP-204ENST00000508838 SLC4A1APQ9BWU0 796 aaKnown RBP9.22□□□□□ -0.93
AFP-204ENST00000508838 ZNF644Q9H582 1327 aaPredicted RBP9.22□□□□□ -0.93
AFP-204ENST00000508838 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.93
AFP-204ENST00000508838 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
AFP-204ENST00000508838 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
AFP-204ENST00000508838 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
AFP-204ENST00000508838 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.94
AFP-204ENST00000508838 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.94
AFP-204ENST00000508838 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
AFP-204ENST00000508838 LRRC7Q96NW7 1537 aa9.21□□□□□ -0.94
AFP-204ENST00000508838 UGGT1Q9NYU2 1555 aa9.2□□□□□ -0.94
AFP-204ENST00000508838 PIK3C2BO00750 1634 aa9.2□□□□□ -0.94
AFP-204ENST00000508838 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
AFP-204ENST00000508838 HNRNPMP52272 730 aaKnown RBP eCLIP9.2□□□□□ -0.94
AFP-204ENST00000508838 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
AFP-204ENST00000508838 ERVK-7P63135 1459 aa9.2□□□□□ -0.94
AFP-204ENST00000508838 MAP3K1Q13233 1512 aa9.2□□□□□ -0.94
AFP-204ENST00000508838 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
AFP-204ENST00000508838 KDM5AP29375 1690 aaKnown RBP9.19□□□□□ -0.94
AFP-204ENST00000508838 TNRQ92752 1358 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms