RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
AFP-204ENST00000508838 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
AFP-204ENST00000508838 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
AFP-204ENST00000508838 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
AFP-204ENST00000508838 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
AFP-204ENST00000508838 FOXD1Q16676 465 aa15.16■□□□□ 0.02
AFP-204ENST00000508838 NISCHQ9Y2I1 1504 aa14.72□□□□□ -0.05
AFP-204ENST00000508838 MSH5O43196 834 aa14.69□□□□□ -0.06
AFP-204ENST00000508838 PIAS4Q8N2W9 510 aaPredicted RBP13.9□□□□□ -0.18
AFP-204ENST00000508838 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
AFP-204ENST00000508838 ABCC9O60706 1549 aa13.42□□□□□ -0.26
AFP-204ENST00000508838 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
AFP-204ENST00000508838 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
AFP-204ENST00000508838 ADRA2BP18089 450 aa13.14□□□□□ -0.31
AFP-204ENST00000508838 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
AFP-204ENST00000508838 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
AFP-204ENST00000508838 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
AFP-204ENST00000508838 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
AFP-204ENST00000508838 POTEHQ6S545 545 aa12.61□□□□□ -0.39
AFP-204ENST00000508838 NACADO15069 1562 aa12.59□□□□□ -0.39
AFP-204ENST00000508838 DMRT2Q9Y5R5 561 aa12.58□□□□□ -0.4
AFP-204ENST00000508838 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
AFP-204ENST00000508838 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
AFP-204ENST00000508838 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
AFP-204ENST00000508838 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
AFP-204ENST00000508838 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
AFP-204ENST00000508838 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
AFP-204ENST00000508838 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
AFP-204ENST00000508838 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
AFP-204ENST00000508838 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.46
AFP-204ENST00000508838 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
AFP-204ENST00000508838 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
AFP-204ENST00000508838 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
AFP-204ENST00000508838 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
AFP-204ENST00000508838 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
AFP-204ENST00000508838 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
AFP-204ENST00000508838 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
AFP-204ENST00000508838 DNAJC5Q9H3Z4 198 aa11.68□□□□□ -0.54
AFP-204ENST00000508838 CUX2O14529 1486 aa11.63□□□□□ -0.55
AFP-204ENST00000508838 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
AFP-204ENST00000508838 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
AFP-204ENST00000508838 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
AFP-204ENST00000508838 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
AFP-204ENST00000508838 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
AFP-204ENST00000508838 NESP48681 1621 aa11.56□□□□□ -0.56
AFP-204ENST00000508838 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
AFP-204ENST00000508838 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
AFP-204ENST00000508838 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
AFP-204ENST00000508838 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
AFP-204ENST00000508838 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
AFP-204ENST00000508838 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
AFP-204ENST00000508838 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
AFP-204ENST00000508838 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
AFP-204ENST00000508838 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
AFP-204ENST00000508838 WDR62O43379 1518 aa11.31□□□□□ -0.6
AFP-204ENST00000508838 WIZO95785 1651 aa11.29□□□□□ -0.6
AFP-204ENST00000508838 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
AFP-204ENST00000508838 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
AFP-204ENST00000508838 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
AFP-204ENST00000508838 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
AFP-204ENST00000508838 DSG3P32926 999 aa11.2□□□□□ -0.62
AFP-204ENST00000508838 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
AFP-204ENST00000508838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.62
AFP-204ENST00000508838 CADPSQ9ULU8 1353 aa11.14□□□□□ -0.63
AFP-204ENST00000508838 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
AFP-204ENST00000508838 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
AFP-204ENST00000508838 FANCD2Q9BXW9 1451 aa11.09□□□□□ -0.63
AFP-204ENST00000508838 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
AFP-204ENST00000508838 CFTRP13569 1480 aa11.08□□□□□ -0.64
AFP-204ENST00000508838 RIMBP3CA6NJZ7 1639 aa11.08□□□□□ -0.64
AFP-204ENST00000508838 RIMBP3BA6NNM3 1639 aa11.08□□□□□ -0.64
AFP-204ENST00000508838 RIMBP3Q9UFD9 1639 aa11.08□□□□□ -0.64
AFP-204ENST00000508838 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
AFP-204ENST00000508838 CAPN15O75808 1086 aa11.03□□□□□ -0.64
AFP-204ENST00000508838 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.65
AFP-204ENST00000508838 CHD1O14646 1710 aa11.01□□□□□ -0.65
AFP-204ENST00000508838 TRIM41Q8WV44 630 aa11□□□□□ -0.65
AFP-204ENST00000508838 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
AFP-204ENST00000508838 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
AFP-204ENST00000508838 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
AFP-204ENST00000508838 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.65
AFP-204ENST00000508838 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
AFP-204ENST00000508838 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
AFP-204ENST00000508838 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
AFP-204ENST00000508838 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
AFP-204ENST00000508838 TOPBP1Q92547 1522 aa10.92□□□□□ -0.66
AFP-204ENST00000508838 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.67
AFP-204ENST00000508838 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
AFP-204ENST00000508838 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
AFP-204ENST00000508838 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
AFP-204ENST00000508838 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
AFP-204ENST00000508838 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
AFP-204ENST00000508838 POLA1P09884 1462 aaPredicted RBP10.81□□□□□ -0.68
AFP-204ENST00000508838 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
AFP-204ENST00000508838 PBRM1Q86U86 1689 aa10.78□□□□□ -0.68
AFP-204ENST00000508838 RBM42Q9BTD8 480 aaKnown RBP10.76□□□□□ -0.69
AFP-204ENST00000508838 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.696e-26■■■■■ 70.5
AFP-204ENST00000508838 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
AFP-204ENST00000508838 CUX1P39880 1505 aa10.73□□□□□ -0.69
AFP-204ENST00000508838 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms