RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 TRHP20396 242 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-204ENST00000507996 ANKRD30AQ9BXX3 1397 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 ANP32CO43423 234 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 MAPK8IP2Q13387 824 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-204ENST00000507996 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-204ENST00000507996 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 SCAPERQ9BY12 1400 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 MBD5Q9P267 1494 aa8.29□□□□□ -1.08
KDM3B-204ENST00000507996 ABCA9Q8IUA7 1624 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.28□□□□□ -1.088e-9■■□□□ 12.6
KDM3B-204ENST00000507996 TRAPPC8Q9Y2L5 1435 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 CCDC141Q6ZP82 1450 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 ARHGEF12Q9NZN5 1544 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 RAPGEF3O95398 923 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 FAM43AQ8N2R8 423 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 SPAG9O60271 1321 aaKnown RBP8.28□□□□□ -1.08
KDM3B-204ENST00000507996 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
KDM3B-204ENST00000507996 NCOA1Q15788 1441 aa8.27□□□□□ -1.08
KDM3B-204ENST00000507996 DDX10Q13206 875 aaKnown RBP8.27□□□□□ -1.09
KDM3B-204ENST00000507996 PODXL2Q9NZ53 605 aa8.27□□□□□ -1.09
KDM3B-204ENST00000507996 KDM6BO15054 1643 aa8.27□□□□□ -1.09
KDM3B-204ENST00000507996 PLEKHH2Q8IVE3 1493 aa8.27□□□□□ -1.09
KDM3B-204ENST00000507996 KIF15Q9NS87 1388 aa8.27□□□□□ -1.09
KDM3B-204ENST00000507996 TSPOAP1O95153 1857 aa8.27□□□□□ -1.09
KDM3B-204ENST00000507996 SIN3AQ96ST3 1273 aa8.26□□□□□ -1.09
KDM3B-204ENST00000507996 ROCK1Q13464 1354 aa8.26□□□□□ -1.09
KDM3B-204ENST00000507996 KIAA1107Q9UPP5 1409 aa8.26□□□□□ -1.09
KDM3B-204ENST00000507996 KIF13AQ9H1H9 1805 aa8.25□□□□□ -1.09
KDM3B-204ENST00000507996 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
KDM3B-204ENST00000507996 ANKRD50Q9ULJ7 1429 aa8.25□□□□□ -1.09
KDM3B-204ENST00000507996 ABCC1P33527 1531 aa8.25□□□□□ -1.09
KDM3B-204ENST00000507996 DIP2BQ9P265 1576 aa8.24□□□□□ -1.09
KDM3B-204ENST00000507996 ARHGEF5Q12774 1597 aa8.24□□□□□ -1.09
KDM3B-204ENST00000507996 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
KDM3B-204ENST00000507996 CROCC2H7BZ55 1655 aa8.24□□□□□ -1.09
KDM3B-204ENST00000507996 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
KDM3B-204ENST00000507996 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
KDM3B-204ENST00000507996 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
KDM3B-204ENST00000507996 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 NUP155O75694 1391 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 SHANK2Q9UPX8 1470 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 ARAP3Q8WWN8 1544 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 GSE1Q14687 1217 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 ADGRL2O95490 1459 aa8.22□□□□□ -1.09
KDM3B-204ENST00000507996 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.09
KDM3B-204ENST00000507996 KIF3BO15066 747 aa8.21□□□□□ -1.1
KDM3B-204ENST00000507996 PLEKHG5O94827 1062 aa8.21□□□□□ -1.1
KDM3B-204ENST00000507996 PPRC1Q5VV67 1664 aaKnown RBP8.2□□□□□ -1.1
KDM3B-204ENST00000507996 NEFMP07197 916 aa8.2□□□□□ -1.1
KDM3B-204ENST00000507996 PKD2Q13563 968 aa8.2□□□□□ -1.1
KDM3B-204ENST00000507996 ZBED9Q6R2W3 1325 aa8.2□□□□□ -1.1
KDM3B-204ENST00000507996 MAP3K4Q9Y6R4 1608 aa8.2□□□□□ -1.1
KDM3B-204ENST00000507996 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
KDM3B-204ENST00000507996 DENND4BO75064 1496 aaPredicted RBP8.2□□□□□ -1.1
KDM3B-204ENST00000507996 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
KDM3B-204ENST00000507996 ZNF518AQ6AHZ1 1483 aa8.19□□□□□ -1.1
KDM3B-204ENST00000507996 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
KDM3B-204ENST00000507996 B4GALNT3Q6L9W6 998 aa8.19□□□□□ -1.1
KDM3B-204ENST00000507996 POLR1AO95602 1720 aaPredicted RBP8.19□□□□□ -1.1
KDM3B-204ENST00000507996 GGT6Q6P531 493 aa8.19□□□□□ -1.1
KDM3B-204ENST00000507996 GLI2P10070 1586 aa8.19□□□□□ -1.1
KDM3B-204ENST00000507996 NEO1Q92859 1461 aa8.19□□□□□ -1.1
KDM3B-204ENST00000507996 CFAP74Q9C0B2 1584 aa8.18□□□□□ -1.1
KDM3B-204ENST00000507996 POGZQ7Z3K3 1410 aa8.18□□□□□ -1.1
KDM3B-204ENST00000507996 ATP7AQ04656 1500 aa8.18□□□□□ -1.1
KDM3B-204ENST00000507996 RRP9O43818 475 aaKnown RBP8.18□□□□□ -1.1
KDM3B-204ENST00000507996 ZFYVE16Q7Z3T8 1539 aa8.17□□□□□ -1.1
KDM3B-204ENST00000507996 TEX14Q8IWB6 1497 aa8.17□□□□□ -1.1
KDM3B-204ENST00000507996 MAST1Q9Y2H9 1570 aa8.17□□□□□ -1.1
KDM3B-204ENST00000507996 DUOX2Q9NRD8 1548 aa8.16□□□□□ -1.1
KDM3B-204ENST00000507996 RTEL1-TNFRSF6BF6WH68 1400 aa8.16□□□□□ -1.1
KDM3B-204ENST00000507996 MLECQ14165 292 aa8.16□□□□□ -1.1
KDM3B-204ENST00000507996 TONSLQ96HA7 1378 aa8.15□□□□□ -1.1
KDM3B-204ENST00000507996 PLXNC1O60486 1568 aa8.15□□□□□ -1.11
KDM3B-204ENST00000507996 PZPP20742 1482 aa8.15□□□□□ -1.11
KDM3B-204ENST00000507996 DHX29Q7Z478 1369 aaKnown RBP8.14□□□□□ -1.11
KDM3B-204ENST00000507996 VSIG10Q8N0Z9 540 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 YEATS2Q9ULM3 1422 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 KIDINS220Q9ULH0 1771 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 MS4A1P11836 297 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 ERBINQ96RT1 1412 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 INO80Q9ULG1 1556 aaPredicted RBP8.14□□□□□ -1.11
KDM3B-204ENST00000507996 A2MP01023 1474 aa8.14□□□□□ -1.11
KDM3B-204ENST00000507996 FOXD4L1Q9NU39 408 aa8.13□□□□□ -1.11
KDM3B-204ENST00000507996 HECW2Q9P2P5 1572 aa8.13□□□□□ -1.11
KDM3B-204ENST00000507996 TCERG1O14776 1098 aaKnown RBP8.13□□□□□ -1.11
KDM3B-204ENST00000507996 COL17A1Q9UMD9 1497 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-204ENST00000507996 ARID4BQ4LE39 1312 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-204ENST00000507996 CENPJQ9HC77 1338 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-204ENST00000507996 CNTLNQ9NXG0 1405 aa8.13□□□□□ -1.11
KDM3B-204ENST00000507996 MLH3Q9UHC1 1453 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
KDM3B-204ENST00000507996 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 KANK1Q14678 1352 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 FAM135AQ9P2D6 1515 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 RGL3Q3MIN7 710 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 KDM5CP41229 1560 aa8.12□□□□□ -1.11
KDM3B-204ENST00000507996 FRAT1Q92837 279 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms