RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CNTLNQ9NXG0 1405 aa15.82■□□□□ 0.12
NFKB1-205ENST00000505458 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
NFKB1-205ENST00000505458 LAMC1P11047 1609 aa15.82■□□□□ 0.12
NFKB1-205ENST00000505458 TET3O43151 1660 aa15.82■□□□□ 0.12
NFKB1-205ENST00000505458 STAC3Q96MF2 364 aa15.81■□□□□ 0.12
NFKB1-205ENST00000505458 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
NFKB1-205ENST00000505458 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
NFKB1-205ENST00000505458 NBPF8Q3BBV2 869 aa15.81■□□□□ 0.12
NFKB1-205ENST00000505458 CCDC7Q96M83 1385 aa15.81■□□□□ 0.12
NFKB1-205ENST00000505458 KDM5CP41229 1560 aa15.8■□□□□ 0.12
NFKB1-205ENST00000505458 SCAPERQ9BY12 1400 aa15.8■□□□□ 0.12
NFKB1-205ENST00000505458 VWDEQ8N2E2 1590 aa15.8■□□□□ 0.12
NFKB1-205ENST00000505458 NEO1Q92859 1461 aa15.79■□□□□ 0.12
NFKB1-205ENST00000505458 PRDM15P57071 1507 aaPredicted RBP15.79■□□□□ 0.12
NFKB1-205ENST00000505458 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
NFKB1-205ENST00000505458 TRPM2O94759 1503 aa15.78■□□□□ 0.12
NFKB1-205ENST00000505458 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.12
NFKB1-205ENST00000505458 USP47Q96K76 1375 aa15.77■□□□□ 0.12
NFKB1-205ENST00000505458 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.11
NFKB1-205ENST00000505458 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
NFKB1-205ENST00000505458 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
NFKB1-205ENST00000505458 SPHKAPQ2M3C7 1700 aa15.76■□□□□ 0.11
NFKB1-205ENST00000505458 MLH3Q9UHC1 1453 aa15.75■□□□□ 0.11
NFKB1-205ENST00000505458 PLA2R1Q13018 1463 aa15.75■□□□□ 0.11
NFKB1-205ENST00000505458 TRPM1Q7Z4N2 1603 aa15.75■□□□□ 0.11
NFKB1-205ENST00000505458 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
NFKB1-205ENST00000505458 POGZQ7Z3K3 1410 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 E9PCH4 1651 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
NFKB1-205ENST00000505458 CEP152O94986 1710 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 LMTK2Q8IWU2 1503 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 GLI2P10070 1586 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 PTPRTO14522 1441 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 PRAG1Q86YV5 1406 aa15.74■□□□□ 0.11
NFKB1-205ENST00000505458 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
NFKB1-205ENST00000505458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
NFKB1-205ENST00000505458 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
NFKB1-205ENST00000505458 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
NFKB1-205ENST00000505458 A2MP01023 1474 aa15.7■□□□□ 0.1
NFKB1-205ENST00000505458 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
NFKB1-205ENST00000505458 DCAF11Q8TEB1 546 aa15.69■□□□□ 0.1
NFKB1-205ENST00000505458 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
NFKB1-205ENST00000505458 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
NFKB1-205ENST00000505458 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
NFKB1-205ENST00000505458 EFCAB6Q5THR3 1501 aa15.68■□□□□ 0.1
NFKB1-205ENST00000505458 ZNF326Q5BKZ1 582 aaKnown RBP15.66■□□□□ 0.1
NFKB1-205ENST00000505458 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
NFKB1-205ENST00000505458 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
NFKB1-205ENST00000505458 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
NFKB1-205ENST00000505458 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
NFKB1-205ENST00000505458 KIF1BO60333 1816 aa15.63■□□□□ 0.09
NFKB1-205ENST00000505458 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
NFKB1-205ENST00000505458 MADDQ8WXG6 1647 aa15.62■□□□□ 0.09
NFKB1-205ENST00000505458 KIF3BO15066 747 aa15.62■□□□□ 0.09
NFKB1-205ENST00000505458 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
NFKB1-205ENST00000505458 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
NFKB1-205ENST00000505458 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
NFKB1-205ENST00000505458 MYOM2P54296 1465 aa15.61■□□□□ 0.09
NFKB1-205ENST00000505458 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
NFKB1-205ENST00000505458 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
NFKB1-205ENST00000505458 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
NFKB1-205ENST00000505458 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
NFKB1-205ENST00000505458 PRKRIP1Q9H875 184 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-205ENST00000505458 PPRC1Q5VV67 1664 aaKnown RBP15.59■□□□□ 0.09
NFKB1-205ENST00000505458 FRMPD1Q5SYB0 1578 aa15.59■□□□□ 0.09
NFKB1-205ENST00000505458 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-205ENST00000505458 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.08
NFKB1-205ENST00000505458 IQGAP1P46940 1657 aa15.57■□□□□ 0.08
NFKB1-205ENST00000505458 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
NFKB1-205ENST00000505458 COL17A1Q9UMD9 1497 aaPredicted RBP15.57■□□□□ 0.08
NFKB1-205ENST00000505458 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
NFKB1-205ENST00000505458 IFT172Q9UG01 1749 aa15.55■□□□□ 0.08
NFKB1-205ENST00000505458 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
NFKB1-205ENST00000505458 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
NFKB1-205ENST00000505458 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
NFKB1-205ENST00000505458 ABCC3O15438 1527 aa15.54■□□□□ 0.08
NFKB1-205ENST00000505458 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
NFKB1-205ENST00000505458 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
NFKB1-205ENST00000505458 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
NFKB1-205ENST00000505458 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
NFKB1-205ENST00000505458 ARHGAP31Q2M1Z3 1444 aa15.53■□□□□ 0.08
NFKB1-205ENST00000505458 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
NFKB1-205ENST00000505458 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
NFKB1-205ENST00000505458 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
NFKB1-205ENST00000505458 TMF1P82094 1093 aa15.5■□□□□ 0.07
NFKB1-205ENST00000505458 RALBP1Q15311 655 aa15.5■□□□□ 0.07
NFKB1-205ENST00000505458 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
NFKB1-205ENST00000505458 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
NFKB1-205ENST00000505458 SETBP1Q9Y6X0 1596 aa15.49■□□□□ 0.07
NFKB1-205ENST00000505458 NPATQ14207 1427 aa15.48■□□□□ 0.07
NFKB1-205ENST00000505458 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
NFKB1-205ENST00000505458 AGLP35573 1532 aa15.46■□□□□ 0.07
NFKB1-205ENST00000505458 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
NFKB1-205ENST00000505458 PIK3C2BO00750 1634 aa15.46■□□□□ 0.07
NFKB1-205ENST00000505458 NOS1P29475 1434 aa15.46■□□□□ 0.07
NFKB1-205ENST00000505458 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
NFKB1-205ENST00000505458 PPLO60437 1756 aa15.46■□□□□ 0.06
NFKB1-205ENST00000505458 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms