RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
LMNA-220ENST00000504687 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
LMNA-220ENST00000504687 PPRC1Q5VV67 1664 aaKnown RBP19.2■□□□□ 0.66
LMNA-220ENST00000504687 VWDEQ8N2E2 1590 aa19.2■□□□□ 0.66
LMNA-220ENST00000504687 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
LMNA-220ENST00000504687 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
LMNA-220ENST00000504687 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
LMNA-220ENST00000504687 ATP10AO60312 1499 aa19.18■□□□□ 0.66
LMNA-220ENST00000504687 PRDM15P57071 1507 aaPredicted RBP19.17■□□□□ 0.66
LMNA-220ENST00000504687 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
LMNA-220ENST00000504687 ZMYM4Q5VZL5 1548 aa19.16■□□□□ 0.66
LMNA-220ENST00000504687 PKD2Q13563 968 aa19.16■□□□□ 0.66
LMNA-220ENST00000504687 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.65
LMNA-220ENST00000504687 TET3O43151 1660 aa19.14■□□□□ 0.65
LMNA-220ENST00000504687 A2MP01023 1474 aa19.13■□□□□ 0.65
LMNA-220ENST00000504687 FRMPD1Q5SYB0 1578 aa19.13■□□□□ 0.65
LMNA-220ENST00000504687 ABCA6Q8N139 1617 aa19.12■□□□□ 0.65
LMNA-220ENST00000504687 LMTK2Q8IWU2 1503 aa19.1■□□□□ 0.65
LMNA-220ENST00000504687 FOXD1Q16676 465 aa19.09■□□□□ 0.65
LMNA-220ENST00000504687 DIP2CQ9Y2E4 1556 aa19.09■□□□□ 0.65
LMNA-220ENST00000504687 E9PCH4 1651 aa19.08■□□□□ 0.64
LMNA-220ENST00000504687 REREQ9P2R6 1566 aa19.07■□□□□ 0.64
LMNA-220ENST00000504687 KANK1Q14678 1352 aa19.06■□□□□ 0.64
LMNA-220ENST00000504687 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
LMNA-220ENST00000504687 PTPRTO14522 1441 aa19.04■□□□□ 0.64
LMNA-220ENST00000504687 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
LMNA-220ENST00000504687 NEURL4Q96JN8 1562 aa19.04■□□□□ 0.64
LMNA-220ENST00000504687 TRPM2O94759 1503 aa19.03■□□□□ 0.64
LMNA-220ENST00000504687 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
LMNA-220ENST00000504687 UHRF1BP1Q6BDS2 1440 aa19.02■□□□□ 0.64
LMNA-220ENST00000504687 EFCAB6Q5THR3 1501 aa19.01■□□□□ 0.63
LMNA-220ENST00000504687 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
LMNA-220ENST00000504687 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
LMNA-220ENST00000504687 KIF3BO15066 747 aa18.99■□□□□ 0.63
LMNA-220ENST00000504687 RAPGEF3O95398 923 aa18.98■□□□□ 0.63
LMNA-220ENST00000504687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.632e-8■■■□□ 16.9
LMNA-220ENST00000504687 CEP152O94986 1710 aa18.97■□□□□ 0.63
LMNA-220ENST00000504687 AGLP35573 1532 aa18.97■□□□□ 0.63
LMNA-220ENST00000504687 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
LMNA-220ENST00000504687 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
LMNA-220ENST00000504687 YEATS2Q9ULM3 1422 aa18.94■□□□□ 0.62
LMNA-220ENST00000504687 ABCC3O15438 1527 aa18.93■□□□□ 0.62
LMNA-220ENST00000504687 COL17A1Q9UMD9 1497 aaPredicted RBP18.92■□□□□ 0.62
LMNA-220ENST00000504687 ARHGEF40Q8TER5 1519 aa18.91■□□□□ 0.62
LMNA-220ENST00000504687 STAC3Q96MF2 364 aa18.91■□□□□ 0.62
LMNA-220ENST00000504687 CAMSAP1Q5T5Y3 1602 aa18.91■□□□□ 0.62
LMNA-220ENST00000504687 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
LMNA-220ENST00000504687 SPATA31E1Q6ZUB1 1445 aa18.91■□□□□ 0.62
LMNA-220ENST00000504687 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
LMNA-220ENST00000504687 CLTCL1P53675 1640 aa18.9■□□□□ 0.62
LMNA-220ENST00000504687 NBPF8Q3BBV2 869 aa18.88■□□□□ 0.61
LMNA-220ENST00000504687 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
LMNA-220ENST00000504687 LAMC1P11047 1609 aa18.87■□□□□ 0.61
LMNA-220ENST00000504687 CNTLNQ9NXG0 1405 aa18.86■□□□□ 0.61
LMNA-220ENST00000504687 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
LMNA-220ENST00000504687 KIF1BO60333 1816 aa18.85■□□□□ 0.61
LMNA-220ENST00000504687 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
LMNA-220ENST00000504687 NPATQ14207 1427 aa18.84■□□□□ 0.61
LMNA-220ENST00000504687 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
LMNA-220ENST00000504687 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
LMNA-220ENST00000504687 NOS1P29475 1434 aa18.83■□□□□ 0.6
LMNA-220ENST00000504687 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
LMNA-220ENST00000504687 IFT172Q9UG01 1749 aa18.81■□□□□ 0.6
LMNA-220ENST00000504687 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
LMNA-220ENST00000504687 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
LMNA-220ENST00000504687 SIGLEC1Q9BZZ2 1709 aa18.79■□□□□ 0.6
LMNA-220ENST00000504687 KIAA1210Q9ULL0 1709 aa18.79■□□□□ 0.6
LMNA-220ENST00000504687 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
LMNA-220ENST00000504687 GGT6Q6P531 493 aa18.78■□□□□ 0.6
LMNA-220ENST00000504687 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
LMNA-220ENST00000504687 MYOM2P54296 1465 aa18.77■□□□□ 0.6
LMNA-220ENST00000504687 DCAF11Q8TEB1 546 aa18.77■□□□□ 0.6
LMNA-220ENST00000504687 HSPA5P11021 654 aaKnown RBP18.76■□□□□ 0.59
LMNA-220ENST00000504687 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
LMNA-220ENST00000504687 SYNMO15061 1565 aa18.75■□□□□ 0.59
LMNA-220ENST00000504687 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
LMNA-220ENST00000504687 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
LMNA-220ENST00000504687 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
LMNA-220ENST00000504687 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
LMNA-220ENST00000504687 USP47Q96K76 1375 aa18.71■□□□□ 0.59
LMNA-220ENST00000504687 PPLO60437 1756 aa18.7■□□□□ 0.58
LMNA-220ENST00000504687 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
LMNA-220ENST00000504687 RPGRIP1LQ68CZ1 1315 aa18.69■□□□□ 0.58
LMNA-220ENST00000504687 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
LMNA-220ENST00000504687 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
LMNA-220ENST00000504687 SLC52A1Q9NWF4 448 aa18.67■□□□□ 0.58
LMNA-220ENST00000504687 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
LMNA-220ENST00000504687 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
LMNA-220ENST00000504687 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
LMNA-220ENST00000504687 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
LMNA-220ENST00000504687 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
LMNA-220ENST00000504687 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
LMNA-220ENST00000504687 WASHC2AQ641Q2 1341 aa18.65■□□□□ 0.58
LMNA-220ENST00000504687 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
LMNA-220ENST00000504687 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
LMNA-220ENST00000504687 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
LMNA-220ENST00000504687 MIER1Q8N108 512 aa18.63■□□□□ 0.57
LMNA-220ENST00000504687 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
LMNA-220ENST00000504687 SETBP1Q9Y6X0 1596 aa18.63■□□□□ 0.57
LMNA-220ENST00000504687 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms