RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
DHFR-202ENST00000504396 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
DHFR-202ENST00000504396 CDC42BPAQ5VT25 1732 aa14.81□□□□□ -0.04
DHFR-202ENST00000504396 AGLP35573 1532 aa14.8□□□□□ -0.04
DHFR-202ENST00000504396 PROM2Q8N271 834 aa14.8□□□□□ -0.04
DHFR-202ENST00000504396 CASKIN1Q8WXD9 1431 aa14.79□□□□□ -0.04
DHFR-202ENST00000504396 KIDINS220Q9ULH0 1771 aa14.79□□□□□ -0.04
DHFR-202ENST00000504396 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
DHFR-202ENST00000504396 PTPRTO14522 1441 aa14.76□□□□□ -0.05
DHFR-202ENST00000504396 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
DHFR-202ENST00000504396 SYCP2Q9BX26 1530 aa14.76□□□□□ -0.05
DHFR-202ENST00000504396 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
DHFR-202ENST00000504396 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
DHFR-202ENST00000504396 FYCO1Q9BQS8 1478 aa14.75□□□□□ -0.05
DHFR-202ENST00000504396 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
DHFR-202ENST00000504396 SPATA31D1Q6ZQQ2 1576 aa14.74□□□□□ -0.05
DHFR-202ENST00000504396 CAMSAP1Q5T5Y3 1602 aa14.74□□□□□ -0.05
DHFR-202ENST00000504396 MROH2AA6NES4 1674 aa14.73□□□□□ -0.05
DHFR-202ENST00000504396 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
DHFR-202ENST00000504396 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
DHFR-202ENST00000504396 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
DHFR-202ENST00000504396 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
DHFR-202ENST00000504396 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
DHFR-202ENST00000504396 ATP7AQ04656 1500 aa14.71□□□□□ -0.06
DHFR-202ENST00000504396 HNRNPMP52272 730 aaKnown RBP eCLIP14.7□□□□□ -0.06
DHFR-202ENST00000504396 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
DHFR-202ENST00000504396 NPATQ14207 1427 aa14.7□□□□□ -0.06
DHFR-202ENST00000504396 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
DHFR-202ENST00000504396 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
DHFR-202ENST00000504396 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
DHFR-202ENST00000504396 PLEKHH2Q8IVE3 1493 aa14.68□□□□□ -0.06
DHFR-202ENST00000504396 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
DHFR-202ENST00000504396 INO80Q9ULG1 1556 aaPredicted RBP14.67□□□□□ -0.06
DHFR-202ENST00000504396 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
DHFR-202ENST00000504396 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
DHFR-202ENST00000504396 GGT6Q6P531 493 aa14.66□□□□□ -0.06
DHFR-202ENST00000504396 A2MP01023 1474 aa14.66□□□□□ -0.06
DHFR-202ENST00000504396 IQSEC2Q5JU85 1478 aa14.66□□□□□ -0.06
DHFR-202ENST00000504396 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
DHFR-202ENST00000504396 ZNF142P52746 1687 aaPredicted RBP14.66□□□□□ -0.06
DHFR-202ENST00000504396 SOCS7O14512 581 aa14.66□□□□□ -0.06
DHFR-202ENST00000504396 PLXNC1O60486 1568 aa14.65□□□□□ -0.06
DHFR-202ENST00000504396 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
DHFR-202ENST00000504396 CEP170BQ9Y4F5 1589 aaPredicted RBP14.65□□□□□ -0.06
DHFR-202ENST00000504396 ZNF335Q9H4Z2 1342 aaPredicted RBP14.64□□□□□ -0.07
DHFR-202ENST00000504396 ADGBQ8N7X0 1667 aa14.64□□□□□ -0.07
DHFR-202ENST00000504396 UBAP1LF5GYI3 381 aa14.62□□□□□ -0.07
DHFR-202ENST00000504396 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
DHFR-202ENST00000504396 PKD2Q13563 968 aa14.6□□□□□ -0.07
DHFR-202ENST00000504396 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
DHFR-202ENST00000504396 TIAM1Q13009 1591 aa14.59□□□□□ -0.07
DHFR-202ENST00000504396 EHBP1L1Q8N3D4 1523 aa14.58□□□□□ -0.08
DHFR-202ENST00000504396 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
DHFR-202ENST00000504396 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
DHFR-202ENST00000504396 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
DHFR-202ENST00000504396 A2ML1A8K2U0 1454 aa14.56□□□□□ -0.08
DHFR-202ENST00000504396 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
DHFR-202ENST00000504396 DNMT1P26358 1616 aaKnown RBP14.55□□□□□ -0.08
DHFR-202ENST00000504396 HAX1O00165 279 aa14.54□□□□□ -0.08
DHFR-202ENST00000504396 RTEL1-TNFRSF6BF6WH68 1400 aa14.54□□□□□ -0.08
DHFR-202ENST00000504396 FAM135AQ9P2D6 1515 aa14.53□□□□□ -0.08
DHFR-202ENST00000504396 KIF3BO15066 747 aa14.52□□□□□ -0.08
DHFR-202ENST00000504396 KDM5DQ9BY66 1539 aa14.52□□□□□ -0.09
DHFR-202ENST00000504396 TNRQ92752 1358 aa14.52□□□□□ -0.09
DHFR-202ENST00000504396 MBD5Q9P267 1494 aa14.52□□□□□ -0.09
DHFR-202ENST00000504396 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
DHFR-202ENST00000504396 PIP4K2BP78356 416 aa14.51□□□□□ -0.09
DHFR-202ENST00000504396 DHX29Q7Z478 1369 aaKnown RBP14.51□□□□□ -0.09
DHFR-202ENST00000504396 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
DHFR-202ENST00000504396 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
DHFR-202ENST00000504396 CAMSAP2Q08AD1 1489 aa14.49□□□□□ -0.09
DHFR-202ENST00000504396 WASHC2CQ9Y4E1 1318 aa14.49□□□□□ -0.09
DHFR-202ENST00000504396 PZPP20742 1482 aa14.49□□□□□ -0.09
DHFR-202ENST00000504396 FBXO31Q5XUX0 539 aaPredicted RBP14.49□□□□□ -0.09
DHFR-202ENST00000504396 CPS1P31327 1500 aa14.48□□□□□ -0.09
DHFR-202ENST00000504396 NEURL4Q96JN8 1562 aa14.48□□□□□ -0.09
DHFR-202ENST00000504396 RSPH4AQ5TD94 716 aa14.48□□□□□ -0.09
DHFR-202ENST00000504396 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
DHFR-202ENST00000504396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.46□□□□□ -0.092e-9■■■■■ 39.6
DHFR-202ENST00000504396 TOM1O60784 492 aa14.46□□□□□ -0.09
DHFR-202ENST00000504396 HSPA1LP34931 641 aa14.46□□□□□ -0.09
DHFR-202ENST00000504396 SHANK2Q9UPX8 1470 aa14.46□□□□□ -0.1
DHFR-202ENST00000504396 ANKLE2Q86XL3 938 aa14.45□□□□□ -0.1
DHFR-202ENST00000504396 UGGT1Q9NYU2 1555 aa14.45□□□□□ -0.1
DHFR-202ENST00000504396 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
DHFR-202ENST00000504396 NLRP1Q9C000 1473 aa14.43□□□□□ -0.1
DHFR-202ENST00000504396 ARHGEF5Q12774 1597 aa14.43□□□□□ -0.1
DHFR-202ENST00000504396 TSPY4P0CV99 314 aa14.42□□□□□ -0.1
DHFR-202ENST00000504396 TSPY10P0CW01 314 aa14.42□□□□□ -0.1
DHFR-202ENST00000504396 THEMISQ8N1K5 641 aaPredicted RBP14.42□□□□□ -0.1
DHFR-202ENST00000504396 IQGAP1P46940 1657 aa14.42□□□□□ -0.1
DHFR-202ENST00000504396 NPHP4O75161 1426 aaPredicted RBP14.42□□□□□ -0.1
DHFR-202ENST00000504396 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
DHFR-202ENST00000504396 EVX2Q03828 476 aa14.41□□□□□ -0.1
DHFR-202ENST00000504396 VWDEQ8N2E2 1590 aa14.41□□□□□ -0.1
DHFR-202ENST00000504396 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
DHFR-202ENST00000504396 ZC3H13Q5T200 1668 aaKnown RBP14.4□□□□□ -0.1
DHFR-202ENST00000504396 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
DHFR-202ENST00000504396 MIER1Q8N108 512 aa14.38□□□□□ -0.11
DHFR-202ENST00000504396 RNF17Q9BXT8 1623 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms