RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
SKP2-203ENST00000504386 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
SKP2-203ENST00000504386 ADGRL2O95490 1459 aa11.85□□□□□ -0.51
SKP2-203ENST00000504386 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
SKP2-203ENST00000504386 KANK1Q14678 1352 aa11.85□□□□□ -0.51
SKP2-203ENST00000504386 NPATQ14207 1427 aa11.85□□□□□ -0.51
SKP2-203ENST00000504386 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
SKP2-203ENST00000504386 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
SKP2-203ENST00000504386 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
SKP2-203ENST00000504386 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
SKP2-203ENST00000504386 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
SKP2-203ENST00000504386 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
SKP2-203ENST00000504386 RRP7BPQ9NSQ0 103 aa11.83□□□□□ -0.52
SKP2-203ENST00000504386 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
SKP2-203ENST00000504386 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
SKP2-203ENST00000504386 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
SKP2-203ENST00000504386 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
SKP2-203ENST00000504386 ANKRD50Q9ULJ7 1429 aa11.8□□□□□ -0.52
SKP2-203ENST00000504386 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
SKP2-203ENST00000504386 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
SKP2-203ENST00000504386 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
SKP2-203ENST00000504386 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
SKP2-203ENST00000504386 PZPP20742 1482 aa11.77□□□□□ -0.52
SKP2-203ENST00000504386 PRDM15P57071 1507 aaPredicted RBP11.77□□□□□ -0.52
SKP2-203ENST00000504386 C3P01024 1663 aa11.77□□□□□ -0.53
SKP2-203ENST00000504386 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.53
SKP2-203ENST00000504386 PREX1Q8TCU6 1659 aa11.77□□□□□ -0.53
SKP2-203ENST00000504386 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
SKP2-203ENST00000504386 ITGAEP38570 1179 aa11.76□□□□□ -0.53
SKP2-203ENST00000504386 PTPRKQ15262 1439 aa11.76□□□□□ -0.53
SKP2-203ENST00000504386 ABCC3O15438 1527 aa11.76□□□□□ -0.53
SKP2-203ENST00000504386 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
SKP2-203ENST00000504386 ARHGAP31Q2M1Z3 1444 aa11.75□□□□□ -0.53
SKP2-203ENST00000504386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■□□□ 12.2
SKP2-203ENST00000504386 TNRQ92752 1358 aa11.74□□□□□ -0.53
SKP2-203ENST00000504386 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
SKP2-203ENST00000504386 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
SKP2-203ENST00000504386 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
SKP2-203ENST00000504386 MROH1Q8NDA8 1641 aa11.71□□□□□ -0.53
SKP2-203ENST00000504386 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
SKP2-203ENST00000504386 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
SKP2-203ENST00000504386 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
SKP2-203ENST00000504386 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
SKP2-203ENST00000504386 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
SKP2-203ENST00000504386 PKD2Q13563 968 aa11.69□□□□□ -0.54
SKP2-203ENST00000504386 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
SKP2-203ENST00000504386 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
SKP2-203ENST00000504386 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
SKP2-203ENST00000504386 MYO3AQ8NEV4 1616 aa11.68□□□□□ -0.54
SKP2-203ENST00000504386 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
SKP2-203ENST00000504386 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
SKP2-203ENST00000504386 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
SKP2-203ENST00000504386 NUP155O75694 1391 aa11.67□□□□□ -0.54
SKP2-203ENST00000504386 UNC13BO14795 1591 aa11.67□□□□□ -0.54
SKP2-203ENST00000504386 HSPA2P54652 639 aa11.67□□□□□ -0.54
SKP2-203ENST00000504386 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
SKP2-203ENST00000504386 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
SKP2-203ENST00000504386 SLC52A1Q9NWF4 448 aa11.66□□□□□ -0.54
SKP2-203ENST00000504386 NAIPQ13075 1403 aa11.66□□□□□ -0.54
SKP2-203ENST00000504386 CEP152O94986 1710 aa11.66□□□□□ -0.54
SKP2-203ENST00000504386 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
SKP2-203ENST00000504386 TET3O43151 1660 aa11.65□□□□□ -0.55
SKP2-203ENST00000504386 GCC2Q8IWJ2 1684 aa11.65□□□□□ -0.55
SKP2-203ENST00000504386 UGGT1Q9NYU2 1555 aa11.64□□□□□ -0.55
SKP2-203ENST00000504386 PTPRTO14522 1441 aa11.64□□□□□ -0.55
SKP2-203ENST00000504386 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
SKP2-203ENST00000504386 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
SKP2-203ENST00000504386 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
SKP2-203ENST00000504386 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
SKP2-203ENST00000504386 NOS1P29475 1434 aa11.61□□□□□ -0.55
SKP2-203ENST00000504386 EID1Q9Y6B2 187 aa11.61□□□□□ -0.55
SKP2-203ENST00000504386 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
SKP2-203ENST00000504386 SETD5Q9C0A6 1442 aa11.58□□□□□ -0.56
SKP2-203ENST00000504386 IDI1Q13907 227 aa11.57□□□□□ -0.56
SKP2-203ENST00000504386 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
SKP2-203ENST00000504386 HRCP23327 699 aa11.56□□□□□ -0.56
SKP2-203ENST00000504386 SLIT1O75093 1534 aa11.55□□□□□ -0.56
SKP2-203ENST00000504386 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
SKP2-203ENST00000504386 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
SKP2-203ENST00000504386 MED14O60244 1454 aa11.55□□□□□ -0.56
SKP2-203ENST00000504386 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
SKP2-203ENST00000504386 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
SKP2-203ENST00000504386 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
SKP2-203ENST00000504386 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
SKP2-203ENST00000504386 NPHP4O75161 1426 aaPredicted RBP11.54□□□□□ -0.56
SKP2-203ENST00000504386 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
SKP2-203ENST00000504386 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
SKP2-203ENST00000504386 E9PCH4 1651 aa11.54□□□□□ -0.56
SKP2-203ENST00000504386 SYNMO15061 1565 aa11.54□□□□□ -0.56
SKP2-203ENST00000504386 CFAP65Q6ZU64 1925 aaKnown RBP11.53□□□□□ -0.56
SKP2-203ENST00000504386 UBR1Q8IWV7 1749 aa11.53□□□□□ -0.56
SKP2-203ENST00000504386 PIK3C2BO00750 1634 aa11.53□□□□□ -0.56
SKP2-203ENST00000504386 POLR1AO95602 1720 aaPredicted RBP11.52□□□□□ -0.56
SKP2-203ENST00000504386 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
SKP2-203ENST00000504386 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
SKP2-203ENST00000504386 TRPM2O94759 1503 aa11.51□□□□□ -0.57
SKP2-203ENST00000504386 MPHOSPH9Q99550 1183 aa11.5□□□□□ -0.57
SKP2-203ENST00000504386 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
SKP2-203ENST00000504386 IQSEC2Q5JU85 1478 aa11.5□□□□□ -0.57
SKP2-203ENST00000504386 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms