RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ABCC5O15440 1437 aa15.89■□□□□ 0.13
COPS4-202ENST00000503682 FGD6Q6ZV73 1430 aa15.89■□□□□ 0.13
COPS4-202ENST00000503682 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
COPS4-202ENST00000503682 MYO3AQ8NEV4 1616 aa15.87■□□□□ 0.13
COPS4-202ENST00000503682 CFAP65Q6ZU64 1925 aaKnown RBP15.87■□□□□ 0.13
COPS4-202ENST00000503682 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
COPS4-202ENST00000503682 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
COPS4-202ENST00000503682 NPATQ14207 1427 aa15.87■□□□□ 0.13
COPS4-202ENST00000503682 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
COPS4-202ENST00000503682 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
COPS4-202ENST00000503682 DAPK1P53355 1430 aa15.86■□□□□ 0.13
COPS4-202ENST00000503682 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
COPS4-202ENST00000503682 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
COPS4-202ENST00000503682 TCOF1Q13428 1488 aaKnown RBP15.85■□□□□ 0.13
COPS4-202ENST00000503682 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
COPS4-202ENST00000503682 CAMSAP1Q5T5Y3 1602 aa15.84■□□□□ 0.13
COPS4-202ENST00000503682 CEP152O94986 1710 aa15.84■□□□□ 0.13
COPS4-202ENST00000503682 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.13
COPS4-202ENST00000503682 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.13
COPS4-202ENST00000503682 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.12
COPS4-202ENST00000503682 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
COPS4-202ENST00000503682 ZNF142P52746 1687 aaPredicted RBP15.82■□□□□ 0.12
COPS4-202ENST00000503682 EIF2AK4Q9P2K8 1649 aaKnown RBP15.82■□□□□ 0.12
COPS4-202ENST00000503682 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
COPS4-202ENST00000503682 DUOX2Q9NRD8 1548 aa15.81■□□□□ 0.12
COPS4-202ENST00000503682 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
COPS4-202ENST00000503682 NCKAP5LQ9HCH0 1330 aa15.8■□□□□ 0.12
COPS4-202ENST00000503682 ABCC3O15438 1527 aa15.8■□□□□ 0.12
COPS4-202ENST00000503682 PZPP20742 1482 aa15.79■□□□□ 0.12
COPS4-202ENST00000503682 NCOA1Q15788 1441 aa15.79■□□□□ 0.12
COPS4-202ENST00000503682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
COPS4-202ENST00000503682 TNRQ92752 1358 aa15.77■□□□□ 0.12
COPS4-202ENST00000503682 ZC3H13Q5T200 1668 aaKnown RBP15.77■□□□□ 0.12
COPS4-202ENST00000503682 KCNA4P22459 653 aa15.76■□□□□ 0.11
COPS4-202ENST00000503682 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
COPS4-202ENST00000503682 FAM135AQ9P2D6 1515 aa15.76■□□□□ 0.11
COPS4-202ENST00000503682 FBXO41Q8TF61 875 aa15.75■□□□□ 0.11
COPS4-202ENST00000503682 A2ML1A8K2U0 1454 aa15.75■□□□□ 0.11
COPS4-202ENST00000503682 ERBINQ96RT1 1412 aa15.75■□□□□ 0.11
COPS4-202ENST00000503682 CERKQ8TCT0 537 aa15.74■□□□□ 0.11
COPS4-202ENST00000503682 ANKRD30AQ9BXX3 1397 aa15.74■□□□□ 0.11
COPS4-202ENST00000503682 PTPRTO14522 1441 aa15.73■□□□□ 0.11
COPS4-202ENST00000503682 DEPDC5O75140 1603 aa15.73■□□□□ 0.11
COPS4-202ENST00000503682 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
COPS4-202ENST00000503682 ITGAEP38570 1179 aa15.72■□□□□ 0.11
COPS4-202ENST00000503682 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.1
COPS4-202ENST00000503682 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
COPS4-202ENST00000503682 ERVK-7P63135 1459 aa15.7■□□□□ 0.1
COPS4-202ENST00000503682 POLR1AO95602 1720 aaPredicted RBP15.7■□□□□ 0.1
COPS4-202ENST00000503682 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
COPS4-202ENST00000503682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
COPS4-202ENST00000503682 UGGT1Q9NYU2 1555 aa15.69■□□□□ 0.1
COPS4-202ENST00000503682 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
COPS4-202ENST00000503682 PKD2Q13563 968 aa15.67■□□□□ 0.1
COPS4-202ENST00000503682 ZNF335Q9H4Z2 1342 aaPredicted RBP15.67■□□□□ 0.1
COPS4-202ENST00000503682 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
COPS4-202ENST00000503682 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
COPS4-202ENST00000503682 KANK1Q14678 1352 aa15.65■□□□□ 0.1
COPS4-202ENST00000503682 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
COPS4-202ENST00000503682 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
COPS4-202ENST00000503682 UBR1Q8IWV7 1749 aa15.65■□□□□ 0.1
COPS4-202ENST00000503682 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
COPS4-202ENST00000503682 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
COPS4-202ENST00000503682 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
COPS4-202ENST00000503682 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
COPS4-202ENST00000503682 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
COPS4-202ENST00000503682 SYNMO15061 1565 aa15.6■□□□□ 0.09
COPS4-202ENST00000503682 EFCAB6Q5THR3 1501 aa15.6■□□□□ 0.09
COPS4-202ENST00000503682 UNC13BO14795 1591 aa15.58■□□□□ 0.08
COPS4-202ENST00000503682 IQGAP1P46940 1657 aa15.58■□□□□ 0.08
COPS4-202ENST00000503682 NPHP4O75161 1426 aaPredicted RBP15.57■□□□□ 0.08
COPS4-202ENST00000503682 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
COPS4-202ENST00000503682 IDI1Q13907 227 aa15.57■□□□□ 0.08
COPS4-202ENST00000503682 TET3O43151 1660 aa15.56■□□□□ 0.08
COPS4-202ENST00000503682 LTKP29376 864 aa15.56■□□□□ 0.08
COPS4-202ENST00000503682 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
COPS4-202ENST00000503682 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
COPS4-202ENST00000503682 E9PCH4 1651 aa15.55■□□□□ 0.08
COPS4-202ENST00000503682 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
COPS4-202ENST00000503682 NOS1P29475 1434 aa15.55■□□□□ 0.08
COPS4-202ENST00000503682 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
COPS4-202ENST00000503682 STRCP1A6NGW2 1772 aa15.55■□□□□ 0.08
COPS4-202ENST00000503682 MED14O60244 1454 aa15.54■□□□□ 0.08
COPS4-202ENST00000503682 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
COPS4-202ENST00000503682 TXNDC2Q86VQ3 553 aa15.54■□□□□ 0.08
COPS4-202ENST00000503682 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.07
COPS4-202ENST00000503682 ARHGAP23Q9P227 1491 aa15.52■□□□□ 0.07
COPS4-202ENST00000503682 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.07
COPS4-202ENST00000503682 SLIT1O75093 1534 aa15.52■□□□□ 0.07
COPS4-202ENST00000503682 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
COPS4-202ENST00000503682 NUP155O75694 1391 aa15.51■□□□□ 0.07
COPS4-202ENST00000503682 IQSEC2Q5JU85 1478 aa15.49■□□□□ 0.07
COPS4-202ENST00000503682 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
COPS4-202ENST00000503682 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
COPS4-202ENST00000503682 RPRD2Q5VT52 1461 aaKnown RBP15.49■□□□□ 0.07
COPS4-202ENST00000503682 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
COPS4-202ENST00000503682 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
COPS4-202ENST00000503682 EID1Q9Y6B2 187 aa15.48■□□□□ 0.07
COPS4-202ENST00000503682 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
COPS4-202ENST00000503682 SLC52A1Q9NWF4 448 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms