RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 CARD11Q9BXL7 1154 aa25.73■■□□□ 1.71
LPCAT1-203ENST00000503252 FKBP8Q14318 412 aa25.73■■□□□ 1.71
LPCAT1-203ENST00000503252 POLR3GLQ9BT43 218 aa25.71■■□□□ 1.71
LPCAT1-203ENST00000503252 CCDC144AA2RUR9 1427 aa25.71■■□□□ 1.71
LPCAT1-203ENST00000503252 DUOX2Q9NRD8 1548 aa25.71■■□□□ 1.71
LPCAT1-203ENST00000503252 PLA2R1Q13018 1463 aa25.71■■□□□ 1.71
LPCAT1-203ENST00000503252 ABCC1P33527 1531 aa25.7■■□□□ 1.71
LPCAT1-203ENST00000503252 TRAPPC8Q9Y2L5 1435 aa25.7■■□□□ 1.7
LPCAT1-203ENST00000503252 IQGAP3Q86VI3 1631 aa25.68■■□□□ 1.7
LPCAT1-203ENST00000503252 BCANQ96GW7 911 aa25.67■■□□□ 1.7
LPCAT1-203ENST00000503252 MRS2Q9HD23 443 aa25.66■■□□□ 1.7
LPCAT1-203ENST00000503252 ERBINQ96RT1 1412 aa25.66■■□□□ 1.7
LPCAT1-203ENST00000503252 RGL3Q3MIN7 710 aa25.65■■□□□ 1.7
LPCAT1-203ENST00000503252 DHX29Q7Z478 1369 aaKnown RBP25.65■■□□□ 1.7
LPCAT1-203ENST00000503252 ARID4BQ4LE39 1312 aaPredicted RBP25.63■■□□□ 1.69
LPCAT1-203ENST00000503252 ST20-MTHFSA0A0A6YYL1 179 aa25.63■■□□□ 1.69
LPCAT1-203ENST00000503252 FAM9BQ8IZU0 186 aa25.63■■□□□ 1.69
LPCAT1-203ENST00000503252 MAGI2Q86UL8 1455 aa25.62■■□□□ 1.69
LPCAT1-203ENST00000503252 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
LPCAT1-203ENST00000503252 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
LPCAT1-203ENST00000503252 NEFLP07196 543 aa25.61■■□□□ 1.69
LPCAT1-203ENST00000503252 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
LPCAT1-203ENST00000503252 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
LPCAT1-203ENST00000503252 WDR7Q9Y4E6 1490 aa25.59■■□□□ 1.69
LPCAT1-203ENST00000503252 SPAG9O60271 1321 aaKnown RBP25.59■■□□□ 1.69
LPCAT1-203ENST00000503252 A2MP01023 1474 aa25.58■■□□□ 1.69
LPCAT1-203ENST00000503252 ARAP3Q8WWN8 1544 aa25.57■■□□□ 1.68
LPCAT1-203ENST00000503252 TRPM1Q7Z4N2 1603 aa25.56■■□□□ 1.68
LPCAT1-203ENST00000503252 NBPF1Q3BBV0 1214 aa25.54■■□□□ 1.68
LPCAT1-203ENST00000503252 ATP10AO60312 1499 aa25.53■■□□□ 1.68
LPCAT1-203ENST00000503252 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
LPCAT1-203ENST00000503252 RTEL1-TNFRSF6BF6WH68 1400 aa25.52■■□□□ 1.68
LPCAT1-203ENST00000503252 FANCAO15360 1455 aa25.51■■□□□ 1.67
LPCAT1-203ENST00000503252 ABCA9Q8IUA7 1624 aa25.48■■□□□ 1.67
LPCAT1-203ENST00000503252 GPRASP1Q5JY77 1395 aa25.46■■□□□ 1.67
LPCAT1-203ENST00000503252 ASXL2Q76L83 1435 aa25.46■■□□□ 1.67
LPCAT1-203ENST00000503252 ZBED9Q6R2W3 1325 aa25.44■■□□□ 1.66
LPCAT1-203ENST00000503252 E9PCH4 1651 aa25.44■■□□□ 1.66
LPCAT1-203ENST00000503252 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
LPCAT1-203ENST00000503252 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
LPCAT1-203ENST00000503252 ADGRL1O94910 1474 aa25.42■■□□□ 1.66
LPCAT1-203ENST00000503252 INO80Q9ULG1 1556 aaPredicted RBP25.41■■□□□ 1.66
LPCAT1-203ENST00000503252 TSHZ2Q9NRE2 1034 aa25.4■■□□□ 1.66
LPCAT1-203ENST00000503252 MYT1LQ9UL68 1186 aa25.4■■□□□ 1.66
LPCAT1-203ENST00000503252 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
LPCAT1-203ENST00000503252 DEPDC5O75140 1603 aa25.39■■□□□ 1.65
LPCAT1-203ENST00000503252 LAMC1P11047 1609 aa25.39■■□□□ 1.65
LPCAT1-203ENST00000503252 EIF2AK4Q9P2K8 1649 aaKnown RBP25.39■■□□□ 1.65
LPCAT1-203ENST00000503252 IRX6P78412 446 aaPredicted RBP25.38■■□□□ 1.65
LPCAT1-203ENST00000503252 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
LPCAT1-203ENST00000503252 KIF3BO15066 747 aa25.36■■□□□ 1.65
LPCAT1-203ENST00000503252 TESK2Q96S53 571 aa25.36■■□□□ 1.65
LPCAT1-203ENST00000503252 TRPM2O94759 1503 aa25.35■■□□□ 1.65
LPCAT1-203ENST00000503252 PTPRTO14522 1441 aa25.34■■□□□ 1.65
LPCAT1-203ENST00000503252 DISP3Q9P2K9 1392 aa25.33■■□□□ 1.65
LPCAT1-203ENST00000503252 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
LPCAT1-203ENST00000503252 SPHKAPQ2M3C7 1700 aa25.33■■□□□ 1.64
LPCAT1-203ENST00000503252 PNISRQ8TF01 805 aaKnown RBP25.32■■□□□ 1.64
LPCAT1-203ENST00000503252 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
LPCAT1-203ENST00000503252 TET3O43151 1660 aa25.32■■□□□ 1.64
LPCAT1-203ENST00000503252 KANK1Q14678 1352 aa25.32■■□□□ 1.64
LPCAT1-203ENST00000503252 VWDEQ8N2E2 1590 aa25.3■■□□□ 1.64
LPCAT1-203ENST00000503252 CLTCL1P53675 1640 aa25.3■■□□□ 1.64
LPCAT1-203ENST00000503252 NPM1P06748 294 aaKnown RBP eCLIP25.3■■□□□ 1.64
LPCAT1-203ENST00000503252 RALBP1Q15311 655 aa25.3■■□□□ 1.64
LPCAT1-203ENST00000503252 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
LPCAT1-203ENST00000503252 RNF17Q9BXT8 1623 aaKnown RBP25.29■■□□□ 1.64
LPCAT1-203ENST00000503252 CEP152O94986 1710 aa25.28■■□□□ 1.64
LPCAT1-203ENST00000503252 MADDQ8WXG6 1647 aa25.28■■□□□ 1.64
LPCAT1-203ENST00000503252 KTN1Q86UP2 1357 aaKnown RBP25.28■■□□□ 1.64
LPCAT1-203ENST00000503252 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
LPCAT1-203ENST00000503252 PER1O15534 1290 aaPredicted RBP25.26■■□□□ 1.63
LPCAT1-203ENST00000503252 SENP3-EIF4A1A0A087X0R7 540 aa25.25■■□□□ 1.63
LPCAT1-203ENST00000503252 KIDINS220Q9ULH0 1771 aa25.25■■□□□ 1.63
LPCAT1-203ENST00000503252 BRD4O60885 1362 aaPredicted RBP25.25■■□□□ 1.63
LPCAT1-203ENST00000503252 TMF1P82094 1093 aa25.24■■□□□ 1.63
LPCAT1-203ENST00000503252 ZNF518AQ6AHZ1 1483 aa25.21■■□□□ 1.63
LPCAT1-203ENST00000503252 PARD3Q8TEW0 1356 aa25.21■■□□□ 1.63
LPCAT1-203ENST00000503252 CD109Q6YHK3 1445 aa25.2■■□□□ 1.62
LPCAT1-203ENST00000503252 PANK3Q9H999 370 aa25.2■■□□□ 1.62
LPCAT1-203ENST00000503252 LRPPRCP42704 1394 aaKnown RBP25.2■■□□□ 1.62
LPCAT1-203ENST00000503252 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
LPCAT1-203ENST00000503252 SMG6Q86US8 1419 aaKnown RBP25.18■■□□□ 1.62
LPCAT1-203ENST00000503252 STAC3Q96MF2 364 aa25.18■■□□□ 1.62
LPCAT1-203ENST00000503252 IQGAP1P46940 1657 aa25.17■■□□□ 1.62
LPCAT1-203ENST00000503252 CC2D1BQ5T0F9 858 aaKnown RBP25.16■■□□□ 1.62
LPCAT1-203ENST00000503252 NLRP13Q86W25 1043 aa25.16■■□□□ 1.62
LPCAT1-203ENST00000503252 ERICH6BQ5W0A0 696 aa25.15■■□□□ 1.62
LPCAT1-203ENST00000503252 EFCAB6Q5THR3 1501 aa25.15■■□□□ 1.62
LPCAT1-203ENST00000503252 NUDCQ9Y266 331 aa25.14■■□□□ 1.61
LPCAT1-203ENST00000503252 POGZQ7Z3K3 1410 aa25.14■■□□□ 1.61
LPCAT1-203ENST00000503252 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
LPCAT1-203ENST00000503252 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
LPCAT1-203ENST00000503252 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
LPCAT1-203ENST00000503252 PPP4R2Q9NY27 417 aa25.1■■□□□ 1.61
LPCAT1-203ENST00000503252 CFAP74Q9C0B2 1584 aa25.1■■□□□ 1.61
LPCAT1-203ENST00000503252 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
LPCAT1-203ENST00000503252 LMTK2Q8IWU2 1503 aa25.08■■□□□ 1.61
LPCAT1-203ENST00000503252 MLH3Q9UHC1 1453 aa25.07■■□□□ 1.6
LPCAT1-203ENST00000503252 ADGRF5Q8IZF2 1346 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms