RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.22
VCAN-204ENST00000502527 UHRF1BP1LA0JNW5 1464 aa22.7■■□□□ 1.22
VCAN-204ENST00000502527 ZBED9Q6R2W3 1325 aa22.69■■□□□ 1.22
VCAN-204ENST00000502527 PLCH2O75038 1416 aa22.68■■□□□ 1.22
VCAN-204ENST00000502527 CLASP1Q7Z460 1538 aa22.68■■□□□ 1.22
VCAN-204ENST00000502527 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
VCAN-204ENST00000502527 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
VCAN-204ENST00000502527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.22
VCAN-204ENST00000502527 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.21
VCAN-204ENST00000502527 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.21
VCAN-204ENST00000502527 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
VCAN-204ENST00000502527 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
VCAN-204ENST00000502527 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
VCAN-204ENST00000502527 PRAG1Q86YV5 1406 aa22.62■■□□□ 1.21
VCAN-204ENST00000502527 ERICH6BQ5W0A0 696 aa22.61■■□□□ 1.21
VCAN-204ENST00000502527 MAGI2Q86UL8 1455 aa22.59■■□□□ 1.21
VCAN-204ENST00000502527 ATP10AO60312 1499 aa22.57■■□□□ 1.2
VCAN-204ENST00000502527 ABCC1P33527 1531 aa22.57■■□□□ 1.2
VCAN-204ENST00000502527 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
VCAN-204ENST00000502527 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
VCAN-204ENST00000502527 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
VCAN-204ENST00000502527 A2MP01023 1474 aa22.55■■□□□ 1.2
VCAN-204ENST00000502527 GPRASP1Q5JY77 1395 aa22.55■■□□□ 1.2
VCAN-204ENST00000502527 MYT1Q01538 1121 aa22.54■■□□□ 1.2
VCAN-204ENST00000502527 CNGB1Q14028 1251 aaPredicted RBP22.54■■□□□ 1.2
VCAN-204ENST00000502527 ARAP3Q8WWN8 1544 aa22.53■■□□□ 1.2
VCAN-204ENST00000502527 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
VCAN-204ENST00000502527 IRX6P78412 446 aaPredicted RBP22.52■■□□□ 1.2
VCAN-204ENST00000502527 RTEL1-TNFRSF6BF6WH68 1400 aa22.5■■□□□ 1.19
VCAN-204ENST00000502527 RALBP1Q15311 655 aa22.5■■□□□ 1.19
VCAN-204ENST00000502527 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
VCAN-204ENST00000502527 LAMC1P11047 1609 aa22.5■■□□□ 1.19
VCAN-204ENST00000502527 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
VCAN-204ENST00000502527 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
VCAN-204ENST00000502527 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
VCAN-204ENST00000502527 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
VCAN-204ENST00000502527 E9PCH4 1651 aa22.47■■□□□ 1.19
VCAN-204ENST00000502527 PPP4R2Q9NY27 417 aa22.47■■□□□ 1.19
VCAN-204ENST00000502527 MYBBP1AQ9BQG0 1328 aaKnown RBP22.47■■□□□ 1.19
VCAN-204ENST00000502527 BRD4O60885 1362 aaPredicted RBP22.47■■□□□ 1.19
VCAN-204ENST00000502527 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
VCAN-204ENST00000502527 PRDM15P57071 1507 aaPredicted RBP22.46■■□□□ 1.19
VCAN-204ENST00000502527 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
VCAN-204ENST00000502527 AFAP1Q8N556 730 aa22.43■■□□□ 1.18
VCAN-204ENST00000502527 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
VCAN-204ENST00000502527 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
VCAN-204ENST00000502527 LRPPRCP42704 1394 aaKnown RBP22.4■■□□□ 1.18
VCAN-204ENST00000502527 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
VCAN-204ENST00000502527 TESK2Q96S53 571 aa22.4■■□□□ 1.18
VCAN-204ENST00000502527 RBM19Q9Y4C8 960 aaKnown RBP22.4■■□□□ 1.18
VCAN-204ENST00000502527 PARD3Q8TEW0 1356 aa22.37■■□□□ 1.17
VCAN-204ENST00000502527 WASHC2CQ9Y4E1 1318 aa22.37■■□□□ 1.17
VCAN-204ENST00000502527 FANCAO15360 1455 aa22.37■■□□□ 1.17
VCAN-204ENST00000502527 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
VCAN-204ENST00000502527 TRPM2O94759 1503 aa22.36■■□□□ 1.17
VCAN-204ENST00000502527 TMF1P82094 1093 aa22.36■■□□□ 1.17
VCAN-204ENST00000502527 NLRP13Q86W25 1043 aa22.36■■□□□ 1.17
VCAN-204ENST00000502527 PER1O15534 1290 aaPredicted RBP22.35■■□□□ 1.17
VCAN-204ENST00000502527 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
VCAN-204ENST00000502527 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
VCAN-204ENST00000502527 PTPRTO14522 1441 aa22.35■■□□□ 1.17
VCAN-204ENST00000502527 DEPDC5O75140 1603 aa22.34■■□□□ 1.17
VCAN-204ENST00000502527 KANK1Q14678 1352 aa22.34■■□□□ 1.17
VCAN-204ENST00000502527 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
VCAN-204ENST00000502527 RNF17Q9BXT8 1623 aaKnown RBP22.34■■□□□ 1.17
VCAN-204ENST00000502527 INO80Q9ULG1 1556 aaPredicted RBP22.32■■□□□ 1.16
VCAN-204ENST00000502527 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
VCAN-204ENST00000502527 TET3O43151 1660 aa22.3■■□□□ 1.16
VCAN-204ENST00000502527 MADDQ8WXG6 1647 aa22.29■■□□□ 1.16
VCAN-204ENST00000502527 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
VCAN-204ENST00000502527 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
VCAN-204ENST00000502527 PANK3Q9H999 370 aa22.29■■□□□ 1.16
VCAN-204ENST00000502527 SPHKAPQ2M3C7 1700 aa22.28■■□□□ 1.16
VCAN-204ENST00000502527 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
VCAN-204ENST00000502527 CEP152O94986 1710 aa22.27■■□□□ 1.16
VCAN-204ENST00000502527 KIF3BO15066 747 aa22.26■■□□□ 1.15
VCAN-204ENST00000502527 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
VCAN-204ENST00000502527 ASXL2Q76L83 1435 aa22.26■■□□□ 1.15
VCAN-204ENST00000502527 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
VCAN-204ENST00000502527 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
VCAN-204ENST00000502527 CC2D1BQ5T0F9 858 aaKnown RBP22.22■■□□□ 1.15
VCAN-204ENST00000502527 SCAF11Q99590 1463 aaKnown RBP22.22■■□□□ 1.15
VCAN-204ENST00000502527 INSRP06213 1382 aa22.22■■□□□ 1.15
VCAN-204ENST00000502527 CDCA8Q53HL2 280 aa22.22■■□□□ 1.15
VCAN-204ENST00000502527 IQGAP1P46940 1657 aa22.22■■□□□ 1.15
VCAN-204ENST00000502527 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
VCAN-204ENST00000502527 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
VCAN-204ENST00000502527 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
VCAN-204ENST00000502527 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
VCAN-204ENST00000502527 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
VCAN-204ENST00000502527 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
VCAN-204ENST00000502527 ANP32EQ9BTT0 268 aa22.17■■□□□ 1.14
VCAN-204ENST00000502527 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
VCAN-204ENST00000502527 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
VCAN-204ENST00000502527 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.13
VCAN-204ENST00000502527 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.13
VCAN-204ENST00000502527 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
VCAN-204ENST00000502527 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
VCAN-204ENST00000502527 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
VCAN-204ENST00000502527 MYOM2P54296 1465 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms