RNA–Protein interactions for RNA: ENST00000502490.1

TRIO-203, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-203ENST00000502490 MAPKBP1O60336 1514 aa8.99□□□□□ -0.97
TRIO-203ENST00000502490 SETD5Q9C0A6 1442 aa8.98□□□□□ -0.97
TRIO-203ENST00000502490 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
TRIO-203ENST00000502490 PPP1R15AO75807 674 aaPredicted RBP8.97□□□□□ -0.97
TRIO-203ENST00000502490 CFTRP13569 1480 aa8.96□□□□□ -0.97
TRIO-203ENST00000502490 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
TRIO-203ENST00000502490 RAB3GAP2Q9H2M9 1393 aa8.95□□□□□ -0.98
TRIO-203ENST00000502490 KIF27Q86VH2 1401 aa8.95□□□□□ -0.98
TRIO-203ENST00000502490 TIAM1Q13009 1591 aa8.94□□□□□ -0.98
TRIO-203ENST00000502490 G3V3G9 751 aa8.93□□□□□ -0.98
TRIO-203ENST00000502490 FHAD1B1AJZ9 1412 aa8.92□□□□□ -0.98
TRIO-203ENST00000502490 ERBB3P21860 1342 aa8.92□□□□□ -0.98
TRIO-203ENST00000502490 PAXIP1Q6ZW49 1069 aaPredicted RBP8.92□□□□□ -0.98
TRIO-203ENST00000502490 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
TRIO-203ENST00000502490 PPP4R2Q9NY27 417 aa8.91□□□□□ -0.98
TRIO-203ENST00000502490 WDR97A6NE52 1622 aa8.91□□□□□ -0.98
TRIO-203ENST00000502490 CFAP43Q8NDM7 1665 aa8.9□□□□□ -0.98
TRIO-203ENST00000502490 ARHGAP35Q9NRY4 1499 aa8.89□□□□□ -0.99
TRIO-203ENST00000502490 TMEM92Q6UXU6 159 aa8.89□□□□□ -0.99
TRIO-203ENST00000502490 CFAP44Q96MT7 982 aa8.89□□□□□ -0.99
TRIO-203ENST00000502490 DDX10Q13206 875 aaKnown RBP8.88□□□□□ -0.99
TRIO-203ENST00000502490 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
TRIO-203ENST00000502490 BCANQ96GW7 911 aa8.88□□□□□ -0.99
TRIO-203ENST00000502490 LRRC9Q6ZRR7 1453 aa8.88□□□□□ -0.99
TRIO-203ENST00000502490 HOXB3P14651 431 aaPredicted RBP8.87□□□□□ -0.99
TRIO-203ENST00000502490 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
TRIO-203ENST00000502490 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
TRIO-203ENST00000502490 KIF3CO14782 793 aa8.86□□□□□ -0.99
TRIO-203ENST00000502490 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIO-203ENST00000502490 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
TRIO-203ENST00000502490 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
TRIO-203ENST00000502490 CADPS2Q86UW7 1296 aa8.83□□□□□ -1
TRIO-203ENST00000502490 KCNH8Q96L42 1107 aa8.83□□□□□ -1
TRIO-203ENST00000502490 EFCAB5A4FU69 1503 aa8.83□□□□□ -1
TRIO-203ENST00000502490 TONSLQ96HA7 1378 aa8.83□□□□□ -1
TRIO-203ENST00000502490 NESP48681 1621 aa8.83□□□□□ -1
TRIO-203ENST00000502490 UACAQ9BZF9 1416 aa8.82□□□□□ -1
TRIO-203ENST00000502490 DEKP35659 375 aaKnown RBP8.82□□□□□ -1
TRIO-203ENST00000502490 PTGER2P43116 358 aa8.82□□□□□ -1
TRIO-203ENST00000502490 ZNF710Q8N1W2 664 aa8.82□□□□□ -1
TRIO-203ENST00000502490 CRISPLD2Q9H0B8 497 aa8.82□□□□□ -1
TRIO-203ENST00000502490 PRDM2Q13029 1718 aa8.82□□□□□ -1
TRIO-203ENST00000502490 NCKAP5LQ9HCH0 1330 aa8.81□□□□□ -1
TRIO-203ENST00000502490 C2orf72A6NCS6 295 aa8.81□□□□□ -1
TRIO-203ENST00000502490 NOP58Q9Y2X3 529 aaKnown RBP8.81□□□□□ -1
TRIO-203ENST00000502490 NCOA2Q15596 1464 aa8.81□□□□□ -1
TRIO-203ENST00000502490 FYCO1Q9BQS8 1478 aa8.81□□□□□ -1
TRIO-203ENST00000502490 GPHNQ9NQX3 736 aaPredicted RBP8.8□□□□□ -1
TRIO-203ENST00000502490 USP35Q9P2H5 1018 aa8.8□□□□□ -1
TRIO-203ENST00000502490 LAMC3Q9Y6N6 1575 aa8.8□□□□□ -1
TRIO-203ENST00000502490 CUX1P39880 1505 aa8.8□□□□□ -1
TRIO-203ENST00000502490 CCDC18Q5T9S5 1454 aa8.79□□□□□ -1
TRIO-203ENST00000502490 TRIM52Q96A61 297 aa8.79□□□□□ -1
TRIO-203ENST00000502490 HFM1A2PYH4 1435 aa8.79□□□□□ -1
TRIO-203ENST00000502490 ZBED9Q6R2W3 1325 aa8.79□□□□□ -1
TRIO-203ENST00000502490 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
TRIO-203ENST00000502490 RTL5Q5HYW3 569 aaPredicted RBP8.78□□□□□ -1
TRIO-203ENST00000502490 TMC2Q8TDI7 906 aa8.78□□□□□ -1
TRIO-203ENST00000502490 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1
TRIO-203ENST00000502490 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
TRIO-203ENST00000502490 HNRNPUQ00839 825 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRIO-203ENST00000502490 ZNF687Q8N1G0 1237 aa8.77□□□□□ -1.01
TRIO-203ENST00000502490 PHLDB1Q86UU1 1377 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 PDE4AP27815 886 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 ITGAEP38570 1179 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 FOXK1P85037 733 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 MFSD10Q14728 455 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 AKNAQ7Z591 1439 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 CNTLNQ9NXG0 1405 aa8.76□□□□□ -1.01
TRIO-203ENST00000502490 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
TRIO-203ENST00000502490 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
TRIO-203ENST00000502490 ABCA5Q8WWZ7 1642 aa8.75□□□□□ -1.01
TRIO-203ENST00000502490 FGD5Q6ZNL6 1462 aa8.75□□□□□ -1.01
TRIO-203ENST00000502490 POLR1AO95602 1720 aaPredicted RBP8.74□□□□□ -1.01
TRIO-203ENST00000502490 DSG2Q14126 1118 aa8.74□□□□□ -1.01
TRIO-203ENST00000502490 IPO9Q96P70 1041 aaKnown RBP8.74□□□□□ -1.01
TRIO-203ENST00000502490 PTPN23Q9H3S7 1636 aa8.73□□□□□ -1.01
TRIO-203ENST00000502490 FMN1Q68DA7 1419 aa8.73□□□□□ -1.01
TRIO-203ENST00000502490 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
TRIO-203ENST00000502490 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
TRIO-203ENST00000502490 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 FGD6Q6ZV73 1430 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 DOK7Q18PE1 504 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
TRIO-203ENST00000502490 PCF11O94913 1555 aaKnown RBP8.72□□□□□ -1.01
TRIO-203ENST00000502490 RNF123Q5XPI4 1314 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 IGF1RP08069 1367 aa8.72□□□□□ -1.01
TRIO-203ENST00000502490 URB2Q14146 1524 aaKnown RBP8.71□□□□□ -1.01
TRIO-203ENST00000502490 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.02
TRIO-203ENST00000502490 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRIO-203ENST00000502490 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
TRIO-203ENST00000502490 PLPP6Q8IY26 295 aa8.71□□□□□ -1.02
TRIO-203ENST00000502490 DDX27Q96GQ7 796 aaKnown RBP8.71□□□□□ -1.02
TRIO-203ENST00000502490 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.02
TRIO-203ENST00000502490 KDM5BQ9UGL1 1544 aa8.7□□□□□ -1.02
TRIO-203ENST00000502490 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
TRIO-203ENST00000502490 FAM50AQ14320 339 aaKnown RBP8.7□□□□□ -1.02
TRIO-203ENST00000502490 ARID4BQ4LE39 1312 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms