RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
CLDND1-205ENST00000502288 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
CLDND1-205ENST00000502288 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
CLDND1-205ENST00000502288 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
CLDND1-205ENST00000502288 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
CLDND1-205ENST00000502288 SYNMO15061 1565 aa13.37□□□□□ -0.27
CLDND1-205ENST00000502288 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
CLDND1-205ENST00000502288 PZPP20742 1482 aa13.35□□□□□ -0.27
CLDND1-205ENST00000502288 TNRQ92752 1358 aa13.34□□□□□ -0.27
CLDND1-205ENST00000502288 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-205ENST00000502288 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-205ENST00000502288 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
CLDND1-205ENST00000502288 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
CLDND1-205ENST00000502288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLDND1-205ENST00000502288 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
CLDND1-205ENST00000502288 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
CLDND1-205ENST00000502288 FBXO31Q5XUX0 539 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-205ENST00000502288 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
CLDND1-205ENST00000502288 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
CLDND1-205ENST00000502288 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
CLDND1-205ENST00000502288 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
CLDND1-205ENST00000502288 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
CLDND1-205ENST00000502288 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-205ENST00000502288 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
CLDND1-205ENST00000502288 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
CLDND1-205ENST00000502288 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CLDND1-205ENST00000502288 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
CLDND1-205ENST00000502288 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
CLDND1-205ENST00000502288 FAM135BQ49AJ0 1406 aa13.23□□□□□ -0.29
CLDND1-205ENST00000502288 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
CLDND1-205ENST00000502288 KIF3BO15066 747 aa13.23□□□□□ -0.29
CLDND1-205ENST00000502288 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
CLDND1-205ENST00000502288 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
CLDND1-205ENST00000502288 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
CLDND1-205ENST00000502288 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
CLDND1-205ENST00000502288 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
CLDND1-205ENST00000502288 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-205ENST00000502288 CFAP65Q6ZU64 1925 aaKnown RBP13.19□□□□□ -0.3
CLDND1-205ENST00000502288 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
CLDND1-205ENST00000502288 CCDC141Q6ZP82 1450 aa13.17□□□□□ -0.3
CLDND1-205ENST00000502288 SCAF11Q99590 1463 aaKnown RBP13.17□□□□□ -0.3
CLDND1-205ENST00000502288 SLIT1O75093 1534 aa13.17□□□□□ -0.3
CLDND1-205ENST00000502288 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
CLDND1-205ENST00000502288 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
CLDND1-205ENST00000502288 ABCC3O15438 1527 aa13.15□□□□□ -0.3
CLDND1-205ENST00000502288 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
CLDND1-205ENST00000502288 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
CLDND1-205ENST00000502288 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
CLDND1-205ENST00000502288 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
CLDND1-205ENST00000502288 ARHGEF5Q12774 1597 aa13.14□□□□□ -0.31
CLDND1-205ENST00000502288 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
CLDND1-205ENST00000502288 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
CLDND1-205ENST00000502288 LTKP29376 864 aa13.12□□□□□ -0.31
CLDND1-205ENST00000502288 CEP152O94986 1710 aa13.12□□□□□ -0.31
CLDND1-205ENST00000502288 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
CLDND1-205ENST00000502288 PHLPP1O60346 1717 aa13.11□□□□□ -0.31
CLDND1-205ENST00000502288 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
CLDND1-205ENST00000502288 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
CLDND1-205ENST00000502288 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
CLDND1-205ENST00000502288 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
CLDND1-205ENST00000502288 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLDND1-205ENST00000502288 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
CLDND1-205ENST00000502288 TMEM94Q12767 1356 aa13.08□□□□□ -0.31
CLDND1-205ENST00000502288 JCADQ9P266 1359 aa13.08□□□□□ -0.31
CLDND1-205ENST00000502288 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
CLDND1-205ENST00000502288 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
CLDND1-205ENST00000502288 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
CLDND1-205ENST00000502288 KCNA6P17658 529 aa13.07□□□□□ -0.32
CLDND1-205ENST00000502288 TET3O43151 1660 aa13.07□□□□□ -0.32
CLDND1-205ENST00000502288 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
CLDND1-205ENST00000502288 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
CLDND1-205ENST00000502288 PRDM15P57071 1507 aaPredicted RBP13.06□□□□□ -0.32
CLDND1-205ENST00000502288 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
CLDND1-205ENST00000502288 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
CLDND1-205ENST00000502288 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
CLDND1-205ENST00000502288 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
CLDND1-205ENST00000502288 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-205ENST00000502288 SHPRHQ149N8 1683 aa13.03□□□□□ -0.32
CLDND1-205ENST00000502288 PROSER2Q86WR7 435 aaPredicted RBP13.03□□□□□ -0.32
CLDND1-205ENST00000502288 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
CLDND1-205ENST00000502288 SPATA31A6Q5VVP1 1343 aa13.03□□□□□ -0.32
CLDND1-205ENST00000502288 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
CLDND1-205ENST00000502288 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
CLDND1-205ENST00000502288 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
CLDND1-205ENST00000502288 MSH6P52701 1360 aa13.01□□□□□ -0.33
CLDND1-205ENST00000502288 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
CLDND1-205ENST00000502288 LRP6O75581 1613 aa13□□□□□ -0.33
CLDND1-205ENST00000502288 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
CLDND1-205ENST00000502288 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
CLDND1-205ENST00000502288 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-205ENST00000502288 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
CLDND1-205ENST00000502288 RXRBP28702 533 aa12.97□□□□□ -0.33
CLDND1-205ENST00000502288 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
CLDND1-205ENST00000502288 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.33
CLDND1-205ENST00000502288 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
CLDND1-205ENST00000502288 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
CLDND1-205ENST00000502288 IDI1Q13907 227 aa12.94□□□□□ -0.34
CLDND1-205ENST00000502288 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
CLDND1-205ENST00000502288 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.93□□□□□ -0.34
CLDND1-205ENST00000502288 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms