RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
CLDND1-205ENST00000502288 ABCC9O60706 1549 aa19.41■□□□□ 0.7
CLDND1-205ENST00000502288 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
CLDND1-205ENST00000502288 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
CLDND1-205ENST00000502288 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
CLDND1-205ENST00000502288 NACADO15069 1562 aa18.14■□□□□ 0.49
CLDND1-205ENST00000502288 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
CLDND1-205ENST00000502288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLDND1-205ENST00000502288 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
CLDND1-205ENST00000502288 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
CLDND1-205ENST00000502288 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
CLDND1-205ENST00000502288 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
CLDND1-205ENST00000502288 CC2D2AQ9P2K1 1620 aa17.59■□□□□ 0.41
CLDND1-205ENST00000502288 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
CLDND1-205ENST00000502288 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
CLDND1-205ENST00000502288 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
CLDND1-205ENST00000502288 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
CLDND1-205ENST00000502288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
CLDND1-205ENST00000502288 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
CLDND1-205ENST00000502288 CUX2O14529 1486 aa17.02■□□□□ 0.32
CLDND1-205ENST00000502288 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
CLDND1-205ENST00000502288 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
CLDND1-205ENST00000502288 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
CLDND1-205ENST00000502288 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
CLDND1-205ENST00000502288 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
CLDND1-205ENST00000502288 NESP48681 1621 aa16.55■□□□□ 0.24
CLDND1-205ENST00000502288 SMARCA2P51531 1590 aa16.54■□□□□ 0.24
CLDND1-205ENST00000502288 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CLDND1-205ENST00000502288 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
CLDND1-205ENST00000502288 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
CLDND1-205ENST00000502288 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
CLDND1-205ENST00000502288 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
CLDND1-205ENST00000502288 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
CLDND1-205ENST00000502288 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
CLDND1-205ENST00000502288 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-205ENST00000502288 WDR62O43379 1518 aa16.21■□□□□ 0.19
CLDND1-205ENST00000502288 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
CLDND1-205ENST00000502288 CADPSQ9ULU8 1353 aa16.16■□□□□ 0.18
CLDND1-205ENST00000502288 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
CLDND1-205ENST00000502288 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
CLDND1-205ENST00000502288 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
CLDND1-205ENST00000502288 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
CLDND1-205ENST00000502288 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
CLDND1-205ENST00000502288 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
CLDND1-205ENST00000502288 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
CLDND1-205ENST00000502288 WIZO95785 1651 aa15.92■□□□□ 0.14
CLDND1-205ENST00000502288 CFTRP13569 1480 aa15.9■□□□□ 0.14
CLDND1-205ENST00000502288 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
CLDND1-205ENST00000502288 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
CLDND1-205ENST00000502288 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
CLDND1-205ENST00000502288 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
CLDND1-205ENST00000502288 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
CLDND1-205ENST00000502288 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
CLDND1-205ENST00000502288 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
CLDND1-205ENST00000502288 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
CLDND1-205ENST00000502288 CHD1O14646 1710 aa15.68■□□□□ 0.1
CLDND1-205ENST00000502288 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
CLDND1-205ENST00000502288 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
CLDND1-205ENST00000502288 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
CLDND1-205ENST00000502288 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
CLDND1-205ENST00000502288 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
CLDND1-205ENST00000502288 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
CLDND1-205ENST00000502288 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
CLDND1-205ENST00000502288 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
CLDND1-205ENST00000502288 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.081e-6■■■■□ 26.1
CLDND1-205ENST00000502288 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
CLDND1-205ENST00000502288 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
CLDND1-205ENST00000502288 FBLN2P98095 1184 aa15.46■□□□□ 0.07
CLDND1-205ENST00000502288 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
CLDND1-205ENST00000502288 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
CLDND1-205ENST00000502288 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
CLDND1-205ENST00000502288 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
CLDND1-205ENST00000502288 MAGI1Q96QZ7 1491 aaPredicted RBP15.34■□□□□ 0.05
CLDND1-205ENST00000502288 RAD54L2Q9Y4B4 1467 aa15.34■□□□□ 0.05
CLDND1-205ENST00000502288 SOGA1O94964 1423 aa15.34■□□□□ 0.05
CLDND1-205ENST00000502288 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CLDND1-205ENST00000502288 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-205ENST00000502288 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
CLDND1-205ENST00000502288 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
CLDND1-205ENST00000502288 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
CLDND1-205ENST00000502288 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
CLDND1-205ENST00000502288 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
CLDND1-205ENST00000502288 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
CLDND1-205ENST00000502288 CUX1P39880 1505 aa15.16■□□□□ 0.02
CLDND1-205ENST00000502288 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
CLDND1-205ENST00000502288 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
CLDND1-205ENST00000502288 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
CLDND1-205ENST00000502288 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
CLDND1-205ENST00000502288 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0.01
CLDND1-205ENST00000502288 GRIN2AQ12879 1464 aa15.08■□□□□ 0
CLDND1-205ENST00000502288 NUP160Q12769 1436 aa15.06■□□□□ 0
CLDND1-205ENST00000502288 ADAMTS12P58397 1594 aa15.02□□□□□ -0.01
CLDND1-205ENST00000502288 ILDR1Q86SU0 546 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-205ENST00000502288 ABCC10Q5T3U5 1492 aa14.98□□□□□ -0.01
CLDND1-205ENST00000502288 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
CLDND1-205ENST00000502288 MAPKBP1O60336 1514 aa14.96□□□□□ -0.02
CLDND1-205ENST00000502288 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
CLDND1-205ENST00000502288 KDM6BO15054 1643 aa14.94□□□□□ -0.02
CLDND1-205ENST00000502288 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
CLDND1-205ENST00000502288 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms