RNA–Protein interactions for RNA: ENST00000498652.1

AC004080.5-201, humanhuman

TSL 1 (best) BASIC

Gene AC004080.5, Length 368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004080.5-201ENST00000498652 SHANK2Q9UPX8 1470 aa28.68■■■□□ 2.18
AC004080.5-201ENST00000498652 RRP7BPQ9NSQ0 103 aa28.68■■■□□ 2.18
AC004080.5-201ENST00000498652 DAPK1P53355 1430 aa28.67■■■□□ 2.18
AC004080.5-201ENST00000498652 DUOX2Q9NRD8 1548 aa28.66■■■□□ 2.18
AC004080.5-201ENST00000498652 KIF15Q9NS87 1388 aa28.65■■■□□ 2.18
AC004080.5-201ENST00000498652 FBXO41Q8TF61 875 aa28.65■■■□□ 2.18
AC004080.5-201ENST00000498652 FAM50AQ14320 339 aaKnown RBP28.63■■■□□ 2.17
AC004080.5-201ENST00000498652 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
AC004080.5-201ENST00000498652 ANKRD30AQ9BXX3 1397 aa28.62■■■□□ 2.17
AC004080.5-201ENST00000498652 PTPRTO14522 1441 aa28.61■■■□□ 2.17
AC004080.5-201ENST00000498652 PZPP20742 1482 aa28.61■■■□□ 2.17
AC004080.5-201ENST00000498652 CHIC2Q9UKJ5 165 aa28.61■■■□□ 2.17
AC004080.5-201ENST00000498652 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
AC004080.5-201ENST00000498652 TNRQ92752 1358 aa28.6■■■□□ 2.17
AC004080.5-201ENST00000498652 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
AC004080.5-201ENST00000498652 DNMT1P26358 1616 aaKnown RBP28.59■■■□□ 2.17
AC004080.5-201ENST00000498652 PKD2Q13563 968 aa28.59■■■□□ 2.17
AC004080.5-201ENST00000498652 STRCQ7RTU9 1775 aa28.59■■■□□ 2.17
AC004080.5-201ENST00000498652 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
AC004080.5-201ENST00000498652 CERKQ8TCT0 537 aa28.57■■■□□ 2.16
AC004080.5-201ENST00000498652 RNF17Q9BXT8 1623 aaKnown RBP28.57■■■□□ 2.16
AC004080.5-201ENST00000498652 CAMSAP1Q5T5Y3 1602 aa28.56■■■□□ 2.16
AC004080.5-201ENST00000498652 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
AC004080.5-201ENST00000498652 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
AC004080.5-201ENST00000498652 CEP170BQ9Y4F5 1589 aaPredicted RBP28.54■■■□□ 2.16
AC004080.5-201ENST00000498652 A2ML1A8K2U0 1454 aa28.54■■■□□ 2.16
AC004080.5-201ENST00000498652 NCKAP5LQ9HCH0 1330 aa28.52■■■□□ 2.16
AC004080.5-201ENST00000498652 ABCC3O15438 1527 aa28.52■■■□□ 2.16
AC004080.5-201ENST00000498652 PLA2R1Q13018 1463 aa28.52■■■□□ 2.16
AC004080.5-201ENST00000498652 KANK1Q14678 1352 aa28.51■■■□□ 2.16
AC004080.5-201ENST00000498652 THEMISQ8N1K5 641 aaPredicted RBP28.51■■■□□ 2.15
AC004080.5-201ENST00000498652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.51■■■□□ 2.15
AC004080.5-201ENST00000498652 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
AC004080.5-201ENST00000498652 ZC3H13Q5T200 1668 aaKnown RBP28.49■■■□□ 2.15
AC004080.5-201ENST00000498652 NLRP1Q9C000 1473 aa28.47■■■□□ 2.15
AC004080.5-201ENST00000498652 ADGRL2O95490 1459 aa28.45■■■□□ 2.14
AC004080.5-201ENST00000498652 MROH1Q8NDA8 1641 aa28.44■■■□□ 2.14
AC004080.5-201ENST00000498652 ANKLE2Q86XL3 938 aa28.42■■■□□ 2.14
AC004080.5-201ENST00000498652 PPARGC1BQ86YN6 1023 aaKnown RBP28.42■■■□□ 2.14
AC004080.5-201ENST00000498652 ARHGAP31Q2M1Z3 1444 aa28.42■■■□□ 2.14
AC004080.5-201ENST00000498652 PRDM15P57071 1507 aaPredicted RBP28.41■■■□□ 2.14
AC004080.5-201ENST00000498652 ERVK-7P63135 1459 aa28.39■■■□□ 2.13
AC004080.5-201ENST00000498652 SPATA31D1Q6ZQQ2 1576 aa28.38■■■□□ 2.13
AC004080.5-201ENST00000498652 ANKRD50Q9ULJ7 1429 aa28.37■■■□□ 2.13
AC004080.5-201ENST00000498652 UGGT1Q9NYU2 1555 aa28.37■■■□□ 2.13
AC004080.5-201ENST00000498652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.36■■■□□ 2.13
AC004080.5-201ENST00000498652 DEPDC5O75140 1603 aa28.34■■■□□ 2.13
AC004080.5-201ENST00000498652 CEP152O94986 1710 aa28.34■■■□□ 2.13
AC004080.5-201ENST00000498652 ROCK1Q13464 1354 aa28.33■■■□□ 2.13
AC004080.5-201ENST00000498652 ITGAEP38570 1179 aa28.31■■■□□ 2.12
AC004080.5-201ENST00000498652 LMTK2Q8IWU2 1503 aa28.31■■■□□ 2.12
AC004080.5-201ENST00000498652 ZNF335Q9H4Z2 1342 aaPredicted RBP28.29■■■□□ 2.12
AC004080.5-201ENST00000498652 LTBP4Q8N2S1 1624 aa28.28■■■□□ 2.12
AC004080.5-201ENST00000498652 VWDEQ8N2E2 1590 aa28.26■■■□□ 2.11
AC004080.5-201ENST00000498652 STAG3Q9UJ98 1225 aa28.26■■■□□ 2.11
AC004080.5-201ENST00000498652 IQSEC2Q5JU85 1478 aa28.24■■■□□ 2.11
AC004080.5-201ENST00000498652 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
AC004080.5-201ENST00000498652 MED14O60244 1454 aa28.21■■■□□ 2.11
AC004080.5-201ENST00000498652 NPHP4O75161 1426 aaPredicted RBP28.21■■■□□ 2.11
AC004080.5-201ENST00000498652 SLC52A1Q9NWF4 448 aa28.21■■■□□ 2.11
AC004080.5-201ENST00000498652 EID1Q9Y6B2 187 aa28.21■■■□□ 2.11
AC004080.5-201ENST00000498652 POLR1AO95602 1720 aaPredicted RBP28.19■■■□□ 2.1
AC004080.5-201ENST00000498652 IDI1Q13907 227 aa28.19■■■□□ 2.1
AC004080.5-201ENST00000498652 TXNDC2Q86VQ3 553 aa28.18■■■□□ 2.1
AC004080.5-201ENST00000498652 NEURL4Q96JN8 1562 aa28.18■■■□□ 2.1
AC004080.5-201ENST00000498652 RPRD2Q5VT52 1461 aaKnown RBP28.17■■■□□ 2.1
AC004080.5-201ENST00000498652 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
AC004080.5-201ENST00000498652 RRBP1Q9P2E9 1410 aaKnown RBP28.16■■■□□ 2.1
AC004080.5-201ENST00000498652 NOS1P29475 1434 aa28.15■■■□□ 2.1
AC004080.5-201ENST00000498652 UBR1Q8IWV7 1749 aa28.13■■■□□ 2.09
AC004080.5-201ENST00000498652 NUP155O75694 1391 aa28.11■■■□□ 2.09
AC004080.5-201ENST00000498652 SCAF11Q99590 1463 aaKnown RBP28.11■■■□□ 2.09
AC004080.5-201ENST00000498652 LTKP29376 864 aa28.11■■■□□ 2.09
AC004080.5-201ENST00000498652 SLIT1O75093 1534 aa28.11■■■□□ 2.09
AC004080.5-201ENST00000498652 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
AC004080.5-201ENST00000498652 ARHGAP23Q9P227 1491 aa28.1■■■□□ 2.09
AC004080.5-201ENST00000498652 CPS1P31327 1500 aa28.08■■■□□ 2.09
AC004080.5-201ENST00000498652 UNC13BO14795 1591 aa28.08■■■□□ 2.09
AC004080.5-201ENST00000498652 UBAP1LF5GYI3 381 aa28.08■■■□□ 2.09
AC004080.5-201ENST00000498652 PIK3C2BO00750 1634 aa28.07■■■□□ 2.08
AC004080.5-201ENST00000498652 TET3O43151 1660 aa28.07■■■□□ 2.08
AC004080.5-201ENST00000498652 HDGFP51858 240 aaKnown RBP28.06■■■□□ 2.08
AC004080.5-201ENST00000498652 SYNMO15061 1565 aa28.05■■■□□ 2.08
AC004080.5-201ENST00000498652 IQGAP1P46940 1657 aa28.05■■■□□ 2.08
AC004080.5-201ENST00000498652 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
AC004080.5-201ENST00000498652 TOM1O60784 492 aa28■■■□□ 2.07
AC004080.5-201ENST00000498652 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
AC004080.5-201ENST00000498652 IQGAP3Q86VI3 1631 aa27.99■■■□□ 2.07
AC004080.5-201ENST00000498652 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
AC004080.5-201ENST00000498652 CHGAP10645 457 aaKnown RBP27.96■■■□□ 2.07
AC004080.5-201ENST00000498652 BCANQ96GW7 911 aa27.95■■■□□ 2.06
AC004080.5-201ENST00000498652 NAIPQ13075 1403 aa27.94■■■□□ 2.06
AC004080.5-201ENST00000498652 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.94■■■□□ 2.06
AC004080.5-201ENST00000498652 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
AC004080.5-201ENST00000498652 E9PCH4 1651 aa27.91■■■□□ 2.06
AC004080.5-201ENST00000498652 SLC26A8Q96RN1 970 aa27.89■■■□□ 2.06
AC004080.5-201ENST00000498652 HFM1A2PYH4 1435 aa27.89■■■□□ 2.06
AC004080.5-201ENST00000498652 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
AC004080.5-201ENST00000498652 SCAF1Q9H7N4 1312 aaKnown RBP27.88■■■□□ 2.05
AC004080.5-201ENST00000498652 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms