RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZBTB22O15209 634 aa11.78□□□□□ -0.52
PDZRN3-212ENST00000498048 EFCAB2Q5VUJ9 269 aa11.78□□□□□ -0.52
PDZRN3-212ENST00000498048 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
PDZRN3-212ENST00000498048 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-212ENST00000498048 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.52
PDZRN3-212ENST00000498048 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.52
PDZRN3-212ENST00000498048 TSPY4P0CV99 314 aa11.77□□□□□ -0.53
PDZRN3-212ENST00000498048 TSPY10P0CW01 314 aa11.77□□□□□ -0.53
PDZRN3-212ENST00000498048 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
PDZRN3-212ENST00000498048 E9PCH4 1651 aa11.77□□□□□ -0.53
PDZRN3-212ENST00000498048 NEO1Q92859 1461 aa11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 FRMPD1Q5SYB0 1578 aa11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-212ENST00000498048 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
PDZRN3-212ENST00000498048 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
PDZRN3-212ENST00000498048 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
PDZRN3-212ENST00000498048 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
PDZRN3-212ENST00000498048 RPRD2Q5VT52 1461 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-212ENST00000498048 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
PDZRN3-212ENST00000498048 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
PDZRN3-212ENST00000498048 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
PDZRN3-212ENST00000498048 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-212ENST00000498048 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
PDZRN3-212ENST00000498048 ZMYM4Q5VZL5 1548 aa11.71□□□□□ -0.53
PDZRN3-212ENST00000498048 KIF1BO60333 1816 aa11.7□□□□□ -0.54
PDZRN3-212ENST00000498048 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
PDZRN3-212ENST00000498048 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
PDZRN3-212ENST00000498048 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
PDZRN3-212ENST00000498048 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
PDZRN3-212ENST00000498048 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-212ENST00000498048 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
PDZRN3-212ENST00000498048 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
PDZRN3-212ENST00000498048 NUP155O75694 1391 aa11.68□□□□□ -0.54
PDZRN3-212ENST00000498048 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
PDZRN3-212ENST00000498048 EFCAB6Q5THR3 1501 aa11.67□□□□□ -0.54
PDZRN3-212ENST00000498048 CFAP65Q6ZU64 1925 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-212ENST00000498048 MLH3Q9UHC1 1453 aa11.67□□□□□ -0.54
PDZRN3-212ENST00000498048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDZRN3-212ENST00000498048 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
PDZRN3-212ENST00000498048 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
PDZRN3-212ENST00000498048 TRPM2O94759 1503 aa11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 A2MP01023 1474 aa11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-212ENST00000498048 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
PDZRN3-212ENST00000498048 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
PDZRN3-212ENST00000498048 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
PDZRN3-212ENST00000498048 PKD2Q13563 968 aa11.61□□□□□ -0.55
PDZRN3-212ENST00000498048 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
PDZRN3-212ENST00000498048 SIGLEC1Q9BZZ2 1709 aa11.6□□□□□ -0.55
PDZRN3-212ENST00000498048 ATP10AO60312 1499 aa11.6□□□□□ -0.55
PDZRN3-212ENST00000498048 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
PDZRN3-212ENST00000498048 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
PDZRN3-212ENST00000498048 LAMC1P11047 1609 aa11.6□□□□□ -0.55
PDZRN3-212ENST00000498048 KANK1Q14678 1352 aa11.59□□□□□ -0.55
PDZRN3-212ENST00000498048 CCDC144AA2RUR9 1427 aa11.59□□□□□ -0.55
PDZRN3-212ENST00000498048 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
PDZRN3-212ENST00000498048 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
PDZRN3-212ENST00000498048 MADDQ8WXG6 1647 aa11.58□□□□□ -0.56
PDZRN3-212ENST00000498048 ABCC3O15438 1527 aa11.58□□□□□ -0.56
PDZRN3-212ENST00000498048 CLTCQ00610 1675 aaKnown RBP11.58□□□□□ -0.56
PDZRN3-212ENST00000498048 PPLO60437 1756 aa11.57□□□□□ -0.56
PDZRN3-212ENST00000498048 NEURL4Q96JN8 1562 aa11.57□□□□□ -0.56
PDZRN3-212ENST00000498048 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
PDZRN3-212ENST00000498048 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-212ENST00000498048 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
PDZRN3-212ENST00000498048 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
PDZRN3-212ENST00000498048 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-212ENST00000498048 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
PDZRN3-212ENST00000498048 YEATS2Q9ULM3 1422 aa11.54□□□□□ -0.56
PDZRN3-212ENST00000498048 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
PDZRN3-212ENST00000498048 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
PDZRN3-212ENST00000498048 UGGT1Q9NYU2 1555 aa11.53□□□□□ -0.56
PDZRN3-212ENST00000498048 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
PDZRN3-212ENST00000498048 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
PDZRN3-212ENST00000498048 AGLP35573 1532 aa11.51□□□□□ -0.57
PDZRN3-212ENST00000498048 SYNMO15061 1565 aa11.51□□□□□ -0.57
PDZRN3-212ENST00000498048 KIF3BO15066 747 aa11.51□□□□□ -0.57
PDZRN3-212ENST00000498048 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-212ENST00000498048 L3MBTL2Q969R5 705 aa11.51□□□□□ -0.57
PDZRN3-212ENST00000498048 PTPRTO14522 1441 aa11.5□□□□□ -0.57
PDZRN3-212ENST00000498048 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
PDZRN3-212ENST00000498048 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
PDZRN3-212ENST00000498048 NPATQ14207 1427 aa11.47□□□□□ -0.57
PDZRN3-212ENST00000498048 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
PDZRN3-212ENST00000498048 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
PDZRN3-212ENST00000498048 CNTLNQ9NXG0 1405 aa11.46□□□□□ -0.57
PDZRN3-212ENST00000498048 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
PDZRN3-212ENST00000498048 MYOM2P54296 1465 aa11.45□□□□□ -0.58
PDZRN3-212ENST00000498048 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-212ENST00000498048 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
PDZRN3-212ENST00000498048 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-212ENST00000498048 COL17A1Q9UMD9 1497 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-212ENST00000498048 MYO3AQ8NEV4 1616 aa11.42□□□□□ -0.58
PDZRN3-212ENST00000498048 USP47Q96K76 1375 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms