RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 CEBPAP49715 358 aaPredicted RBP24.66■■□□□ 1.54
COL1A2-212ENST00000497316 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
COL1A2-212ENST00000497316 CLTCQ00610 1675 aaKnown RBP24.65■■□□□ 1.54
COL1A2-212ENST00000497316 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
COL1A2-212ENST00000497316 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
COL1A2-212ENST00000497316 RRP7BPQ9NSQ0 103 aa24.64■■□□□ 1.54
COL1A2-212ENST00000497316 ZMYM3Q14202 1370 aa24.64■■□□□ 1.53
COL1A2-212ENST00000497316 CHIC2Q9UKJ5 165 aa24.63■■□□□ 1.53
COL1A2-212ENST00000497316 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
COL1A2-212ENST00000497316 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
COL1A2-212ENST00000497316 KDM5DQ9BY66 1539 aa24.6■■□□□ 1.53
COL1A2-212ENST00000497316 NPATQ14207 1427 aa24.59■■□□□ 1.53
COL1A2-212ENST00000497316 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
COL1A2-212ENST00000497316 PTPRKQ15262 1439 aa24.58■■□□□ 1.53
COL1A2-212ENST00000497316 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
COL1A2-212ENST00000497316 HSPA2P54652 639 aa24.56■■□□□ 1.52
COL1A2-212ENST00000497316 MROH1Q8NDA8 1641 aa24.56■■□□□ 1.52
COL1A2-212ENST00000497316 WASHC2CQ9Y4E1 1318 aa24.56■■□□□ 1.52
COL1A2-212ENST00000497316 ZC3H13Q5T200 1668 aaKnown RBP24.55■■□□□ 1.52
COL1A2-212ENST00000497316 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
COL1A2-212ENST00000497316 DEPDC5O75140 1603 aa24.52■■□□□ 1.52
COL1A2-212ENST00000497316 UHRF1BP1Q6BDS2 1440 aa24.52■■□□□ 1.52
COL1A2-212ENST00000497316 ABCC3O15438 1527 aa24.51■■□□□ 1.51
COL1A2-212ENST00000497316 ANKRD50Q9ULJ7 1429 aa24.5■■□□□ 1.51
COL1A2-212ENST00000497316 PZPP20742 1482 aa24.5■■□□□ 1.51
COL1A2-212ENST00000497316 ITGAEP38570 1179 aa24.45■■□□□ 1.5
COL1A2-212ENST00000497316 KANK1Q14678 1352 aa24.44■■□□□ 1.5
COL1A2-212ENST00000497316 CEP152O94986 1710 aa24.44■■□□□ 1.5
COL1A2-212ENST00000497316 VWDEQ8N2E2 1590 aa24.43■■□□□ 1.5
COL1A2-212ENST00000497316 FBXO41Q8TF61 875 aa24.43■■□□□ 1.5
COL1A2-212ENST00000497316 ARHGAP31Q2M1Z3 1444 aa24.42■■□□□ 1.5
COL1A2-212ENST00000497316 CAMSAP1Q5T5Y3 1602 aa24.42■■□□□ 1.5
COL1A2-212ENST00000497316 LMTK2Q8IWU2 1503 aa24.41■■□□□ 1.5
COL1A2-212ENST00000497316 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
COL1A2-212ENST00000497316 FBXO31Q5XUX0 539 aaPredicted RBP24.4■■□□□ 1.5
COL1A2-212ENST00000497316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
COL1A2-212ENST00000497316 DMRT2Q9Y5R5 561 aa24.4■■□□□ 1.5
COL1A2-212ENST00000497316 TNRQ92752 1358 aa24.39■■□□□ 1.49
COL1A2-212ENST00000497316 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
COL1A2-212ENST00000497316 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
COL1A2-212ENST00000497316 UNC13BO14795 1591 aa24.37■■□□□ 1.49
COL1A2-212ENST00000497316 CEP170BQ9Y4F5 1589 aaPredicted RBP24.35■■□□□ 1.49
COL1A2-212ENST00000497316 A2ML1A8K2U0 1454 aa24.34■■□□□ 1.49
COL1A2-212ENST00000497316 ERVK-7P63135 1459 aa24.34■■□□□ 1.49
COL1A2-212ENST00000497316 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
COL1A2-212ENST00000497316 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
COL1A2-212ENST00000497316 NAIPQ13075 1403 aa24.3■■□□□ 1.48
COL1A2-212ENST00000497316 GCC2Q8IWJ2 1684 aa24.29■■□□□ 1.48
COL1A2-212ENST00000497316 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
COL1A2-212ENST00000497316 TET3O43151 1660 aa24.27■■□□□ 1.48
COL1A2-212ENST00000497316 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
COL1A2-212ENST00000497316 PLA2R1Q13018 1463 aa24.27■■□□□ 1.48
COL1A2-212ENST00000497316 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
COL1A2-212ENST00000497316 CFAP65Q6ZU64 1925 aaKnown RBP24.26■■□□□ 1.47
COL1A2-212ENST00000497316 IQGAP3Q86VI3 1631 aa24.26■■□□□ 1.47
COL1A2-212ENST00000497316 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
COL1A2-212ENST00000497316 NUP155O75694 1391 aa24.23■■□□□ 1.47
COL1A2-212ENST00000497316 NOS1P29475 1434 aa24.22■■□□□ 1.47
COL1A2-212ENST00000497316 UGGT1Q9NYU2 1555 aa24.21■■□□□ 1.47
COL1A2-212ENST00000497316 PTPRTO14522 1441 aa24.21■■□□□ 1.47
COL1A2-212ENST00000497316 PKD2Q13563 968 aa24.2■■□□□ 1.46
COL1A2-212ENST00000497316 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
COL1A2-212ENST00000497316 SYNMO15061 1565 aa24.16■■□□□ 1.46
COL1A2-212ENST00000497316 E9PCH4 1651 aa24.15■■□□□ 1.46
COL1A2-212ENST00000497316 UBR1Q8IWV7 1749 aa24.15■■□□□ 1.46
COL1A2-212ENST00000497316 SLC52A1Q9NWF4 448 aa24.14■■□□□ 1.45
COL1A2-212ENST00000497316 NCKAP5LQ9HCH0 1330 aa24.13■■□□□ 1.45
COL1A2-212ENST00000497316 KDM5AP29375 1690 aaKnown RBP24.13■■□□□ 1.45
COL1A2-212ENST00000497316 IDI1Q13907 227 aa24.12■■□□□ 1.45
COL1A2-212ENST00000497316 PIK3C2BO00750 1634 aa24.11■■□□□ 1.45
COL1A2-212ENST00000497316 POLR1AO95602 1720 aaPredicted RBP24.1■■□□□ 1.45
COL1A2-212ENST00000497316 ANKLE2Q86XL3 938 aa24.1■■□□□ 1.45
COL1A2-212ENST00000497316 ACIN1Q9UKV3 1341 aaKnown RBP24.09■■□□□ 1.45
COL1A2-212ENST00000497316 SLIT1O75093 1534 aa24.07■■□□□ 1.44
COL1A2-212ENST00000497316 NEURL4Q96JN8 1562 aa24.07■■□□□ 1.44
COL1A2-212ENST00000497316 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
COL1A2-212ENST00000497316 MED14O60244 1454 aa24.06■■□□□ 1.44
COL1A2-212ENST00000497316 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
COL1A2-212ENST00000497316 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
COL1A2-212ENST00000497316 SETD5Q9C0A6 1442 aa24.04■■□□□ 1.44
COL1A2-212ENST00000497316 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
COL1A2-212ENST00000497316 TMEM2Q9UHN6 1383 aa24.02■■□□□ 1.44
COL1A2-212ENST00000497316 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
COL1A2-212ENST00000497316 NPHP4O75161 1426 aaPredicted RBP24■■□□□ 1.43
COL1A2-212ENST00000497316 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
COL1A2-212ENST00000497316 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
COL1A2-212ENST00000497316 TMEM131LA2VDJ0 1609 aa23.98■■□□□ 1.43
COL1A2-212ENST00000497316 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
COL1A2-212ENST00000497316 TXNDC2Q86VQ3 553 aa23.97■■□□□ 1.43
COL1A2-212ENST00000497316 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
COL1A2-212ENST00000497316 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
COL1A2-212ENST00000497316 IQGAP1P46940 1657 aa23.96■■□□□ 1.43
COL1A2-212ENST00000497316 LTKP29376 864 aa23.96■■□□□ 1.43
COL1A2-212ENST00000497316 TRPM2O94759 1503 aa23.94■■□□□ 1.42
COL1A2-212ENST00000497316 RAB3GAP2Q9H2M9 1393 aa23.93■■□□□ 1.42
COL1A2-212ENST00000497316 MYO5BQ9ULV0 1848 aa23.93■■□□□ 1.42
COL1A2-212ENST00000497316 HRCP23327 699 aa23.92■■□□□ 1.42
COL1A2-212ENST00000497316 ZNF335Q9H4Z2 1342 aaPredicted RBP23.91■■□□□ 1.42
COL1A2-212ENST00000497316 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
COL1A2-212ENST00000497316 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms