RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 ATP10AO60312 1499 aa16.93■□□□□ 0.3
SLC13A3-211ENST00000495082 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
SLC13A3-211ENST00000495082 REREQ9P2R6 1566 aa16.93■□□□□ 0.3
SLC13A3-211ENST00000495082 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
SLC13A3-211ENST00000495082 BCORL1Q5H9F3 1711 aa16.92■□□□□ 0.3
SLC13A3-211ENST00000495082 ARHGEF40Q8TER5 1519 aa16.92■□□□□ 0.3
SLC13A3-211ENST00000495082 KIF3BO15066 747 aa16.9■□□□□ 0.3
SLC13A3-211ENST00000495082 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
SLC13A3-211ENST00000495082 RNF17Q9BXT8 1623 aaKnown RBP16.89■□□□□ 0.29
SLC13A3-211ENST00000495082 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
SLC13A3-211ENST00000495082 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
SLC13A3-211ENST00000495082 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
SLC13A3-211ENST00000495082 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.29
SLC13A3-211ENST00000495082 AGLP35573 1532 aa16.88■□□□□ 0.29
SLC13A3-211ENST00000495082 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
SLC13A3-211ENST00000495082 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
SLC13A3-211ENST00000495082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.294e-12■■□□□ 12.6
SLC13A3-211ENST00000495082 KANK1Q14678 1352 aa16.86■□□□□ 0.29
SLC13A3-211ENST00000495082 PKD2Q13563 968 aa16.84■□□□□ 0.29
SLC13A3-211ENST00000495082 LMTK2Q8IWU2 1503 aa16.82■□□□□ 0.28
SLC13A3-211ENST00000495082 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
SLC13A3-211ENST00000495082 FOXD1Q16676 465 aa16.8■□□□□ 0.28
SLC13A3-211ENST00000495082 GGT6Q6P531 493 aa16.8■□□□□ 0.28
SLC13A3-211ENST00000495082 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
SLC13A3-211ENST00000495082 TET3O43151 1660 aa16.79■□□□□ 0.28
SLC13A3-211ENST00000495082 SIGLEC1Q9BZZ2 1709 aa16.78■□□□□ 0.28
SLC13A3-211ENST00000495082 ABCC3O15438 1527 aa16.77■□□□□ 0.27
SLC13A3-211ENST00000495082 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
SLC13A3-211ENST00000495082 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
SLC13A3-211ENST00000495082 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
SLC13A3-211ENST00000495082 ZC3H13Q5T200 1668 aaKnown RBP16.75■□□□□ 0.27
SLC13A3-211ENST00000495082 TIMELESSQ9UNS1 1208 aa16.74■□□□□ 0.27
SLC13A3-211ENST00000495082 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
SLC13A3-211ENST00000495082 E9PCH4 1651 aa16.73■□□□□ 0.27
SLC13A3-211ENST00000495082 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
SLC13A3-211ENST00000495082 CEP152O94986 1710 aa16.72■□□□□ 0.27
SLC13A3-211ENST00000495082 PTPRTO14522 1441 aa16.72■□□□□ 0.27
SLC13A3-211ENST00000495082 ARHGAP31Q2M1Z3 1444 aa16.72■□□□□ 0.27
SLC13A3-211ENST00000495082 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
SLC13A3-211ENST00000495082 NPATQ14207 1427 aa16.7■□□□□ 0.26
SLC13A3-211ENST00000495082 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
SLC13A3-211ENST00000495082 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
SLC13A3-211ENST00000495082 TRPM2O94759 1503 aa16.68■□□□□ 0.26
SLC13A3-211ENST00000495082 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
SLC13A3-211ENST00000495082 MLECQ14165 292 aa16.67■□□□□ 0.26
SLC13A3-211ENST00000495082 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
SLC13A3-211ENST00000495082 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
SLC13A3-211ENST00000495082 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
SLC13A3-211ENST00000495082 NOS1P29475 1434 aa16.64■□□□□ 0.25
SLC13A3-211ENST00000495082 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
SLC13A3-211ENST00000495082 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
SLC13A3-211ENST00000495082 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
SLC13A3-211ENST00000495082 CLTCL1P53675 1640 aa16.59■□□□□ 0.25
SLC13A3-211ENST00000495082 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
SLC13A3-211ENST00000495082 MROH2AA6NES4 1674 aa16.58■□□□□ 0.25
SLC13A3-211ENST00000495082 ERVK-7P63135 1459 aa16.58■□□□□ 0.25
SLC13A3-211ENST00000495082 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
SLC13A3-211ENST00000495082 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
SLC13A3-211ENST00000495082 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
SLC13A3-211ENST00000495082 SYNMO15061 1565 aa16.57■□□□□ 0.24
SLC13A3-211ENST00000495082 PREX1Q8TCU6 1659 aa16.57■□□□□ 0.24
SLC13A3-211ENST00000495082 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
SLC13A3-211ENST00000495082 UGGT1Q9NYU2 1555 aa16.55■□□□□ 0.24
SLC13A3-211ENST00000495082 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
SLC13A3-211ENST00000495082 PIK3C2BO00750 1634 aa16.55■□□□□ 0.24
SLC13A3-211ENST00000495082 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
SLC13A3-211ENST00000495082 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
SLC13A3-211ENST00000495082 ADAMTSL3P82987 1691 aa16.52■□□□□ 0.24
SLC13A3-211ENST00000495082 ADGRB3O60242 1522 aa16.52■□□□□ 0.23
SLC13A3-211ENST00000495082 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
SLC13A3-211ENST00000495082 MADDQ8WXG6 1647 aa16.5■□□□□ 0.23
SLC13A3-211ENST00000495082 IDI1Q13907 227 aa16.5■□□□□ 0.23
SLC13A3-211ENST00000495082 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
SLC13A3-211ENST00000495082 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
SLC13A3-211ENST00000495082 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
SLC13A3-211ENST00000495082 KIF1BO60333 1816 aa16.48■□□□□ 0.23
SLC13A3-211ENST00000495082 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
SLC13A3-211ENST00000495082 TNRQ92752 1358 aa16.48■□□□□ 0.23
SLC13A3-211ENST00000495082 C3P01024 1663 aa16.48■□□□□ 0.23
SLC13A3-211ENST00000495082 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
SLC13A3-211ENST00000495082 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
SLC13A3-211ENST00000495082 CEBPAP49715 358 aaPredicted RBP16.44■□□□□ 0.22
SLC13A3-211ENST00000495082 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
SLC13A3-211ENST00000495082 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
SLC13A3-211ENST00000495082 TMEM131LA2VDJ0 1609 aa16.44■□□□□ 0.22
SLC13A3-211ENST00000495082 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
SLC13A3-211ENST00000495082 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
SLC13A3-211ENST00000495082 MYOM2P54296 1465 aa16.43■□□□□ 0.22
SLC13A3-211ENST00000495082 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
SLC13A3-211ENST00000495082 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
SLC13A3-211ENST00000495082 ZNF326Q5BKZ1 582 aaKnown RBP16.41■□□□□ 0.22
SLC13A3-211ENST00000495082 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
SLC13A3-211ENST00000495082 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
SLC13A3-211ENST00000495082 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
SLC13A3-211ENST00000495082 RALGAPBQ86X10 1494 aa16.39■□□□□ 0.21
SLC13A3-211ENST00000495082 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
SLC13A3-211ENST00000495082 NEXMIFQ5QGS0 1516 aa16.38■□□□□ 0.21
SLC13A3-211ENST00000495082 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
SLC13A3-211ENST00000495082 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
SLC13A3-211ENST00000495082 PTPRMP28827 1452 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms