RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 DNMBPQ6XZF7 1577 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 PDCL2Q8N4E4 241 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 BBXQ8WY36 941 aaPredicted RBP7.66□□□□□ -1.18
PHC3-214ENST00000494943 DIAPH3Q9NSV4 1193 aa7.66□□□□□ -1.18
PHC3-214ENST00000494943 HS1BP3Q53T59 392 aa7.65□□□□□ -1.18
PHC3-214ENST00000494943 FANCD2Q9BXW9 1451 aa7.65□□□□□ -1.18
PHC3-214ENST00000494943 RAPGEF2Q9Y4G8 1499 aa7.65□□□□□ -1.18
PHC3-214ENST00000494943 CIZ1Q9ULV3 898 aaPredicted RBP7.65□□□□□ -1.18
PHC3-214ENST00000494943 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
PHC3-214ENST00000494943 MAPKBP1O60336 1514 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 CUX1P39880 1505 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 UQCRHLA0A096LP55 91 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 UQCRHP07919 91 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 CASC1Q6TDU7 716 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.19
PHC3-214ENST00000494943 NASPP49321 788 aaPredicted RBP7.64□□□□□ -1.19
PHC3-214ENST00000494943 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
PHC3-214ENST00000494943 RWDD1Q9H446 243 aaPredicted RBP7.64□□□□□ -1.19
PHC3-214ENST00000494943 NGEFQ8N5V2 710 aa7.64□□□□□ -1.19
PHC3-214ENST00000494943 CGNL1Q0VF96 1302 aa7.64□□□□□ -1.19
PHC3-214ENST00000494943 CCDC144AA2RUR9 1427 aa7.64□□□□□ -1.19
PHC3-214ENST00000494943 NLRP13Q86W25 1043 aa7.63□□□□□ -1.19
PHC3-214ENST00000494943 DNAJC2Q99543 621 aaKnown RBP7.63□□□□□ -1.19
PHC3-214ENST00000494943 SLC4A3P48751 1232 aa7.63□□□□□ -1.19
PHC3-214ENST00000494943 NOM1Q5C9Z4 860 aaKnown RBP7.63□□□□□ -1.19
PHC3-214ENST00000494943 IPO4Q8TEX9 1081 aaKnown RBP7.63□□□□□ -1.19
PHC3-214ENST00000494943 NCOA2Q15596 1464 aa7.63□□□□□ -1.19
PHC3-214ENST00000494943 CCDC94Q9BW85 323 aaPredicted RBP7.63□□□□□ -1.19
PHC3-214ENST00000494943 RNF123Q5XPI4 1314 aa7.63□□□□□ -1.19
PHC3-214ENST00000494943 CRBNQ96SW2 442 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 MCM4P33991 863 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 ARAP1Q96P48 1450 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 OFD1O75665 1012 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 APPP05067 770 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 TEX35Q5T0J7 233 aa7.62□□□□□ -1.19
PHC3-214ENST00000494943 TOP2BQ02880 1626 aa7.61□□□□□ -1.19
PHC3-214ENST00000494943 KIF16BQ96L93 1317 aa7.61□□□□□ -1.19
PHC3-214ENST00000494943 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
PHC3-214ENST00000494943 RRAGDQ9NQL2 400 aaPredicted RBP7.61□□□□□ -1.19
PHC3-214ENST00000494943 NRDCO43847 1150 aa7.61□□□□□ -1.19
PHC3-214ENST00000494943 TIAM1Q13009 1591 aa7.61□□□□□ -1.19
PHC3-214ENST00000494943 CWC15Q9P013 229 aaKnown RBP7.61□□□□□ -1.19
PHC3-214ENST00000494943 NAP1L2Q9ULW6 460 aaPredicted RBP7.61□□□□□ -1.19
PHC3-214ENST00000494943 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
PHC3-214ENST00000494943 CALCOCO1Q9P1Z2 691 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 TOPBP1Q92547 1522 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 LRRC9Q6ZRR7 1453 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 PRIMPOLQ96LW4 560 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 MIA2Q96PC5 1412 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 ERCC6Q03468 1493 aa7.6□□□□□ -1.19
PHC3-214ENST00000494943 AXDND1Q5T1B0 1012 aaPredicted RBP7.59□□□□□ -1.19
PHC3-214ENST00000494943 POGKQ9P215 609 aa7.59□□□□□ -1.19
PHC3-214ENST00000494943 IRX3P78415 501 aaPredicted RBP7.59□□□□□ -1.19
PHC3-214ENST00000494943 ABCA5Q8WWZ7 1642 aa7.59□□□□□ -1.2
PHC3-214ENST00000494943 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
PHC3-214ENST00000494943 GPS2Q13227 327 aa7.58□□□□□ -1.2
PHC3-214ENST00000494943 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
PHC3-214ENST00000494943 EIF4G3O43432 1585 aaKnown RBP7.58□□□□□ -1.2
PHC3-214ENST00000494943 NCOA1Q15788 1441 aa7.58□□□□□ -1.2
PHC3-214ENST00000494943 NUCB2P80303 420 aa7.58□□□□□ -1.2
PHC3-214ENST00000494943 CFAP43Q8NDM7 1665 aa7.57□□□□□ -1.2
PHC3-214ENST00000494943 GOLGA2Q08379 1002 aa7.57□□□□□ -1.2
PHC3-214ENST00000494943 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
PHC3-214ENST00000494943 XRCC6P12956 609 aaKnown RBP eCLIP7.57□□□□□ -1.2
PHC3-214ENST00000494943 SETQ01105 290 aaPredicted RBP7.57□□□□□ -1.2
PHC3-214ENST00000494943 DMTNQ08495 405 aa7.57□□□□□ -1.2
PHC3-214ENST00000494943 CAVIN1Q6NZI2 390 aaKnown RBP7.57□□□□□ -1.2
PHC3-214ENST00000494943 POLR1AO95602 1720 aaPredicted RBP7.57□□□□□ -1.2
PHC3-214ENST00000494943 ZMYM3Q14202 1370 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 FAM193AP78312 1265 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 INSRP06213 1382 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 ARID3AQ99856 593 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 CARD11Q9BXL7 1154 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 RBM25P49756 843 aaKnown RBP7.56□□□□□ -1.2
PHC3-214ENST00000494943 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 FTSJ3Q8IY81 847 aaKnown RBP7.56□□□□□ -1.2
PHC3-214ENST00000494943 CTR9Q6PD62 1173 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 PBRM1Q86U86 1689 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 HFM1A2PYH4 1435 aa7.56□□□□□ -1.2
PHC3-214ENST00000494943 KIF7Q2M1P5 1343 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 SLC4A1APQ9BWU0 796 aaKnown RBP7.55□□□□□ -1.2
PHC3-214ENST00000494943 PPP4R3BQ5MIZ7 849 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 KDM5BQ9UGL1 1544 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 IFT140Q96RY7 1462 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 PRXQ9BXM0 1461 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 MBD3O95983 291 aa7.55□□□□□ -1.2
PHC3-214ENST00000494943 TIGD1Q96MW7 591 aa7.54□□□□□ -1.2
PHC3-214ENST00000494943 SPRYD3Q8NCJ5 442 aa7.54□□□□□ -1.2
PHC3-214ENST00000494943 FYCO1Q9BQS8 1478 aa7.54□□□□□ -1.2
PHC3-214ENST00000494943 CGNQ9P2M7 1197 aaKnown RBP7.54□□□□□ -1.2
PHC3-214ENST00000494943 KNSTRNQ9Y448 316 aa7.54□□□□□ -1.2
PHC3-214ENST00000494943 CHD1O14646 1710 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
PHC3-214ENST00000494943 ZHX1Q9UKY1 873 aaPredicted RBP7.53□□□□□ -1.2
PHC3-214ENST00000494943 FGD6Q6ZV73 1430 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 MCCP23508 829 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
PHC3-214ENST00000494943 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
PHC3-214ENST00000494943 FEZ1Q99689 392 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 C22orf23Q9BZE7 217 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms