RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 RNF17Q9BXT8 1623 aaKnown RBP26.28■■□□□ 1.8
SNX17-209ENST00000494893 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
SNX17-209ENST00000494893 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
SNX17-209ENST00000494893 MROH2AA6NES4 1674 aa26.27■■□□□ 1.8
SNX17-209ENST00000494893 ERBINQ96RT1 1412 aa26.26■■□□□ 1.79
SNX17-209ENST00000494893 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
SNX17-209ENST00000494893 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
SNX17-209ENST00000494893 ZMYM3Q14202 1370 aa26.25■■□□□ 1.79
SNX17-209ENST00000494893 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
SNX17-209ENST00000494893 KDM5DQ9BY66 1539 aa26.22■■□□□ 1.79
SNX17-209ENST00000494893 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
SNX17-209ENST00000494893 ITGAEP38570 1179 aa26.2■■□□□ 1.78
SNX17-209ENST00000494893 ROCK1Q13464 1354 aa26.2■■□□□ 1.78
SNX17-209ENST00000494893 ABCC3O15438 1527 aa26.17■■□□□ 1.78
SNX17-209ENST00000494893 PRDM15P57071 1507 aaPredicted RBP26.17■■□□□ 1.78
SNX17-209ENST00000494893 DEPDC5O75140 1603 aa26.17■■□□□ 1.78
SNX17-209ENST00000494893 WASHC2CQ9Y4E1 1318 aa26.15■■□□□ 1.78
SNX17-209ENST00000494893 ANKRD50Q9ULJ7 1429 aa26.14■■□□□ 1.78
SNX17-209ENST00000494893 NPATQ14207 1427 aa26.14■■□□□ 1.77
SNX17-209ENST00000494893 PREX1Q8TCU6 1659 aa26.12■■□□□ 1.77
SNX17-209ENST00000494893 ZC3H13Q5T200 1668 aaKnown RBP26.11■■□□□ 1.77
SNX17-209ENST00000494893 PZPP20742 1482 aa26.11■■□□□ 1.77
SNX17-209ENST00000494893 VWDEQ8N2E2 1590 aa26.1■■□□□ 1.77
SNX17-209ENST00000494893 CEP152O94986 1710 aa26.1■■□□□ 1.77
SNX17-209ENST00000494893 HSPA2P54652 639 aa26.08■■□□□ 1.77
SNX17-209ENST00000494893 FBXO31Q5XUX0 539 aaPredicted RBP26.08■■□□□ 1.77
SNX17-209ENST00000494893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.772e-6■□□□□ 10.1
SNX17-209ENST00000494893 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
SNX17-209ENST00000494893 CAMSAP1Q5T5Y3 1602 aa26.05■■□□□ 1.76
SNX17-209ENST00000494893 SETD1BQ9UPS6 1966 aaKnown RBP26.05■■□□□ 1.76
SNX17-209ENST00000494893 LMTK2Q8IWU2 1503 aa26.04■■□□□ 1.76
SNX17-209ENST00000494893 UNC13BO14795 1591 aa26.02■■□□□ 1.76
SNX17-209ENST00000494893 MYO3AQ8NEV4 1616 aa26.02■■□□□ 1.76
SNX17-209ENST00000494893 NAIPQ13075 1403 aa26.01■■□□□ 1.75
SNX17-209ENST00000494893 ARHGAP31Q2M1Z3 1444 aa26■■□□□ 1.75
SNX17-209ENST00000494893 KANK1Q14678 1352 aa26■■□□□ 1.75
SNX17-209ENST00000494893 TNRQ92752 1358 aa25.99■■□□□ 1.75
SNX17-209ENST00000494893 SPATA31D1Q6ZQQ2 1576 aa25.99■■□□□ 1.75
SNX17-209ENST00000494893 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
SNX17-209ENST00000494893 ZNF142P52746 1687 aaPredicted RBP25.96■■□□□ 1.75
SNX17-209ENST00000494893 GCC2Q8IWJ2 1684 aa25.95■■□□□ 1.74
SNX17-209ENST00000494893 HFM1A2PYH4 1435 aa25.95■■□□□ 1.74
SNX17-209ENST00000494893 CEP170BQ9Y4F5 1589 aaPredicted RBP25.95■■□□□ 1.74
SNX17-209ENST00000494893 EFCAB6Q5THR3 1501 aa25.94■■□□□ 1.74
SNX17-209ENST00000494893 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
SNX17-209ENST00000494893 IQGAP3Q86VI3 1631 aa25.89■■□□□ 1.74
SNX17-209ENST00000494893 TET3O43151 1660 aa25.88■■□□□ 1.73
SNX17-209ENST00000494893 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
SNX17-209ENST00000494893 NLRP1Q9C000 1473 aa25.87■■□□□ 1.73
SNX17-209ENST00000494893 NUP155O75694 1391 aa25.87■■□□□ 1.73
SNX17-209ENST00000494893 NOS1P29475 1434 aa25.85■■□□□ 1.73
SNX17-209ENST00000494893 CFAP65Q6ZU64 1925 aaKnown RBP25.84■■□□□ 1.73
SNX17-209ENST00000494893 SYNMO15061 1565 aa25.84■■□□□ 1.73
SNX17-209ENST00000494893 RPRD2Q5VT52 1461 aaKnown RBP25.82■■□□□ 1.72
SNX17-209ENST00000494893 E9PCH4 1651 aa25.8■■□□□ 1.72
SNX17-209ENST00000494893 PLA2R1Q13018 1463 aa25.8■■□□□ 1.72
SNX17-209ENST00000494893 UGGT1Q9NYU2 1555 aa25.79■■□□□ 1.72
SNX17-209ENST00000494893 NCKAP5LQ9HCH0 1330 aa25.76■■□□□ 1.71
SNX17-209ENST00000494893 PIK3C2BO00750 1634 aa25.74■■□□□ 1.71
SNX17-209ENST00000494893 IDI1Q13907 227 aa25.74■■□□□ 1.71
SNX17-209ENST00000494893 UBR1Q8IWV7 1749 aa25.74■■□□□ 1.71
SNX17-209ENST00000494893 PTPRTO14522 1441 aa25.71■■□□□ 1.71
SNX17-209ENST00000494893 THEMISQ8N1K5 641 aaPredicted RBP25.71■■□□□ 1.71
SNX17-209ENST00000494893 SETD5Q9C0A6 1442 aa25.7■■□□□ 1.7
SNX17-209ENST00000494893 NEURL4Q96JN8 1562 aa25.69■■□□□ 1.7
SNX17-209ENST00000494893 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
SNX17-209ENST00000494893 PKD2Q13563 968 aa25.68■■□□□ 1.7
SNX17-209ENST00000494893 SLC52A1Q9NWF4 448 aa25.67■■□□□ 1.7
SNX17-209ENST00000494893 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
SNX17-209ENST00000494893 DMRT2Q9Y5R5 561 aa25.66■■□□□ 1.7
SNX17-209ENST00000494893 ADGRB3O60242 1522 aa25.65■■□□□ 1.7
SNX17-209ENST00000494893 SLIT1O75093 1534 aa25.64■■□□□ 1.7
SNX17-209ENST00000494893 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.69
SNX17-209ENST00000494893 POLR1AO95602 1720 aaPredicted RBP25.63■■□□□ 1.69
SNX17-209ENST00000494893 RAB3GAP2Q9H2M9 1393 aa25.63■■□□□ 1.69
SNX17-209ENST00000494893 ANKLE2Q86XL3 938 aa25.61■■□□□ 1.69
SNX17-209ENST00000494893 MED14O60244 1454 aa25.6■■□□□ 1.69
SNX17-209ENST00000494893 SPHKAPQ2M3C7 1700 aa25.6■■□□□ 1.69
SNX17-209ENST00000494893 TMEM2Q9UHN6 1383 aa25.6■■□□□ 1.69
SNX17-209ENST00000494893 LTKP29376 864 aa25.6■■□□□ 1.69
SNX17-209ENST00000494893 SLC4A1APQ9BWU0 796 aaKnown RBP25.6■■□□□ 1.69
SNX17-209ENST00000494893 TMEM131LA2VDJ0 1609 aa25.59■■□□□ 1.69
SNX17-209ENST00000494893 STAG3Q9UJ98 1225 aa25.57■■□□□ 1.68
SNX17-209ENST00000494893 TRPM2O94759 1503 aa25.57■■□□□ 1.68
SNX17-209ENST00000494893 NPHP4O75161 1426 aaPredicted RBP25.56■■□□□ 1.68
SNX17-209ENST00000494893 SCAF11Q99590 1463 aaKnown RBP25.56■■□□□ 1.68
SNX17-209ENST00000494893 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
SNX17-209ENST00000494893 FOXD1Q16676 465 aa25.54■■□□□ 1.68
SNX17-209ENST00000494893 MYO5BQ9ULV0 1848 aa25.53■■□□□ 1.68
SNX17-209ENST00000494893 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
SNX17-209ENST00000494893 TXNDC2Q86VQ3 553 aa25.53■■□□□ 1.68
SNX17-209ENST00000494893 ZFYVE9O95405 1425 aa25.53■■□□□ 1.68
SNX17-209ENST00000494893 LTBP4Q8N2S1 1624 aa25.52■■□□□ 1.68
SNX17-209ENST00000494893 IQGAP1P46940 1657 aa25.51■■□□□ 1.67
SNX17-209ENST00000494893 ZNF335Q9H4Z2 1342 aaPredicted RBP25.5■■□□□ 1.67
SNX17-209ENST00000494893 CHGAP10645 457 aaKnown RBP25.49■■□□□ 1.67
SNX17-209ENST00000494893 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
SNX17-209ENST00000494893 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
SNX17-209ENST00000494893 HRCP23327 699 aa25.47■■□□□ 1.67
SNX17-209ENST00000494893 EID1Q9Y6B2 187 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms