RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ERCC6L2Q5T890 1561 aa5.25□□□□□ -1.57
ATG3-207ENST00000494571 GOLGA6L3A6NEY3 463 aa5.25□□□□□ -1.57
ATG3-207ENST00000494571 ZBTB9Q96C00 473 aa5.25□□□□□ -1.57
ATG3-207ENST00000494571 IRX3P78415 501 aaPredicted RBP5.25□□□□□ -1.57
ATG3-207ENST00000494571 BACH2Q9BYV9 841 aa5.25□□□□□ -1.57
ATG3-207ENST00000494571 CEP162Q5TB80 1403 aa5.25□□□□□ -1.57
ATG3-207ENST00000494571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATG3-207ENST00000494571 CHMP4CQ96CF2 233 aa5.24□□□□□ -1.57
ATG3-207ENST00000494571 CGNQ9P2M7 1197 aaKnown RBP5.24□□□□□ -1.57
ATG3-207ENST00000494571 KCNG1Q9UIX4 513 aa5.24□□□□□ -1.57
ATG3-207ENST00000494571 EEA1Q15075 1411 aa5.24□□□□□ -1.57
ATG3-207ENST00000494571 ERBB4Q15303 1308 aa5.24□□□□□ -1.57
ATG3-207ENST00000494571 SLKQ9H2G2 1235 aaPredicted RBP5.24□□□□□ -1.57
ATG3-207ENST00000494571 PATL2C9JE40 543 aaKnown RBP5.23□□□□□ -1.57
ATG3-207ENST00000494571 TCERG1O14776 1098 aaKnown RBP5.23□□□□□ -1.57
ATG3-207ENST00000494571 AKNAQ7Z591 1439 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 TMC1Q8TDI8 760 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 ZBTB7CA1YPR0 619 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 IGSF3O75054 1194 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 APPP05067 770 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 HOMEZQ8IX15 550 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 POLR3GLQ9BT43 218 aa5.23□□□□□ -1.57
ATG3-207ENST00000494571 R3HCC1Q9Y3T6 440 aaKnown RBP5.23□□□□□ -1.57
ATG3-207ENST00000494571 DMTNQ08495 405 aa5.22□□□□□ -1.57
ATG3-207ENST00000494571 ZNF579Q8NAF0 562 aaKnown RBP5.22□□□□□ -1.57
ATG3-207ENST00000494571 RIPK4P57078 832 aa5.22□□□□□ -1.57
ATG3-207ENST00000494571 CCDC184Q52MB2 194 aa5.22□□□□□ -1.57
ATG3-207ENST00000494571 MYH16Q9H6N6 1097 aa5.22□□□□□ -1.57
ATG3-207ENST00000494571 SCUBE2Q9NQ36 999 aa5.22□□□□□ -1.57
ATG3-207ENST00000494571 MYCNP04198 464 aaPredicted RBP5.21□□□□□ -1.57
ATG3-207ENST00000494571 CD44P16070 742 aaKnown RBP5.21□□□□□ -1.57
ATG3-207ENST00000494571 RGS22Q8NE09 1264 aa5.21□□□□□ -1.57
ATG3-207ENST00000494571 SYNJ1O43426 1573 aa5.21□□□□□ -1.57
ATG3-207ENST00000494571 ARAP1Q96P48 1450 aa5.21□□□□□ -1.58
ATG3-207ENST00000494571 CBX1P83916 185 aa5.21□□□□□ -1.58
ATG3-207ENST00000494571 DNMBPQ6XZF7 1577 aa5.2□□□□□ -1.58
ATG3-207ENST00000494571 MAGI1Q96QZ7 1491 aaPredicted RBP5.2□□□□□ -1.58
ATG3-207ENST00000494571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.2□□□□□ -1.58
ATG3-207ENST00000494571 MAP7D2Q96T17 732 aa5.2□□□□□ -1.58
ATG3-207ENST00000494571 MRS2Q9HD23 443 aa5.2□□□□□ -1.58
ATG3-207ENST00000494571 FANCD2Q9BXW9 1451 aa5.2□□□□□ -1.58
ATG3-207ENST00000494571 ZSCAN20P17040 1043 aaPredicted RBP5.2□□□□□ -1.58
ATG3-207ENST00000494571 TMED8Q6PL24 325 aaPredicted RBP5.2□□□□□ -1.58
ATG3-207ENST00000494571 NGEFQ8N5V2 710 aa5.2□□□□□ -1.58
ATG3-207ENST00000494571 WRNQ14191 1432 aaPredicted RBP eCLIP5.19□□□□□ -1.58
ATG3-207ENST00000494571 UQCRHLA0A096LP55 91 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 SOX12O15370 315 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 UQCRHP07919 91 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 SPRYD3Q8NCJ5 442 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 EXOC6Q8TAG9 804 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 HDAC5Q9UQL6 1122 aa5.19□□□□□ -1.58
ATG3-207ENST00000494571 TARBP1Q13395 1621 aaKnown RBP5.19□□□□□ -1.58
ATG3-207ENST00000494571 UTP14CQ5TAP6 766 aaKnown RBP5.19□□□□□ -1.58
ATG3-207ENST00000494571 CHRM1P11229 460 aaPredicted RBP5.18□□□□□ -1.58
ATG3-207ENST00000494571 SHROOM2Q13796 1616 aa5.18□□□□□ -1.58
ATG3-207ENST00000494571 FOXD4L1Q9NU39 408 aa5.18□□□□□ -1.58
ATG3-207ENST00000494571 SLC52A1Q9NWF4 448 aa5.18□□□□□ -1.58
ATG3-207ENST00000494571 BCCIPQ9P287 314 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATG3-207ENST00000494571 EIF4G3O43432 1585 aaKnown RBP5.18□□□□□ -1.58
ATG3-207ENST00000494571 TOP2AP11388 1531 aaKnown RBP5.17□□□□□ -1.58
ATG3-207ENST00000494571 URB2Q14146 1524 aaKnown RBP5.17□□□□□ -1.58
ATG3-207ENST00000494571 KCNJ4P48050 445 aa5.17□□□□□ -1.58
ATG3-207ENST00000494571 C7P10643 843 aa5.17□□□□□ -1.58
ATG3-207ENST00000494571 MSNP26038 577 aaKnown RBP5.17□□□□□ -1.58
ATG3-207ENST00000494571 FAM193AP78312 1265 aa5.17□□□□□ -1.58
ATG3-207ENST00000494571 ZNF771Q7L3S4 317 aaPredicted RBP5.17□□□□□ -1.58
ATG3-207ENST00000494571 MAPKBP1O60336 1514 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 KIF20AO95235 890 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.16□□□□□ -1.58
ATG3-207ENST00000494571 CFAP44Q96MT7 982 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 CHD1O14646 1710 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 SPDYE2BA6NHP3 402 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 SPDYE4A6NLX3 237 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 SPDYE6P0CI01 402 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 MS4A1P11836 297 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 MRE11P49959 708 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 IRX5P78411 483 aaPredicted RBP5.16□□□□□ -1.58
ATG3-207ENST00000494571 SPDYE2Q495Y8 402 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 SLC39A7Q92504 469 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 TRERF1Q96PN7 1200 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 GRPEL1Q9HAV7 217 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 ZBED9Q6R2W3 1325 aa5.16□□□□□ -1.58
ATG3-207ENST00000494571 LETM1O95202 739 aaPredicted RBP5.15□□□□□ -1.58
ATG3-207ENST00000494571 XPCQ01831 940 aaPredicted RBP5.15□□□□□ -1.58
ATG3-207ENST00000494571 EP400NLQ6ZTU2 488 aa5.15□□□□□ -1.58
ATG3-207ENST00000494571 CCDC94Q9BW85 323 aaPredicted RBP5.15□□□□□ -1.58
ATG3-207ENST00000494571 TSC1Q92574 1164 aa5.15□□□□□ -1.59
ATG3-207ENST00000494571 JARID2Q92833 1246 aaPredicted RBP5.15□□□□□ -1.59
ATG3-207ENST00000494571 TRIM6-TRIM34B2RNG4 842 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 OFD1O75665 1012 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 PRR29P0C7W0 189 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 MLECQ14165 292 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 ZNF526Q8TF50 670 aaPredicted RBP5.14□□□□□ -1.59
ATG3-207ENST00000494571 TRIM34Q9BYJ4 488 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 GTPBP4Q9BZE4 634 aaKnown RBP5.14□□□□□ -1.59
ATG3-207ENST00000494571 NUDCQ9Y266 331 aa5.14□□□□□ -1.59
ATG3-207ENST00000494571 GLI2P10070 1586 aa5.13□□□□□ -1.59
ATG3-207ENST00000494571 FSD2A1L4K1 749 aa5.13□□□□□ -1.59
ATG3-207ENST00000494571 FAM177BA6PVY3 158 aa5.13□□□□□ -1.59
ATG3-207ENST00000494571 MTERF4Q7Z6M4 381 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms