RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
TRA2A-209ENST00000494255 CNTLNQ9NXG0 1405 aa18.89■□□□□ 0.61
TRA2A-209ENST00000494255 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
TRA2A-209ENST00000494255 ANKRD50Q9ULJ7 1429 aa18.87■□□□□ 0.61
TRA2A-209ENST00000494255 FAM135AQ9P2D6 1515 aa18.85■□□□□ 0.61
TRA2A-209ENST00000494255 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
TRA2A-209ENST00000494255 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
TRA2A-209ENST00000494255 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
TRA2A-209ENST00000494255 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.61
TRA2A-209ENST00000494255 WASHC2CQ9Y4E1 1318 aa18.82■□□□□ 0.6
TRA2A-209ENST00000494255 DEPDC5O75140 1603 aa18.81■□□□□ 0.6
TRA2A-209ENST00000494255 MROH1Q8NDA8 1641 aa18.81■□□□□ 0.6
TRA2A-209ENST00000494255 KANK1Q14678 1352 aa18.8■□□□□ 0.6
TRA2A-209ENST00000494255 C3P01024 1663 aa18.8■□□□□ 0.6
TRA2A-209ENST00000494255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.66e-8■■□□□ 13.6
TRA2A-209ENST00000494255 PRDM15P57071 1507 aaPredicted RBP18.8■□□□□ 0.6
TRA2A-209ENST00000494255 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
TRA2A-209ENST00000494255 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
TRA2A-209ENST00000494255 CEBPAP49715 358 aaPredicted RBP18.79■□□□□ 0.6
TRA2A-209ENST00000494255 GCC2Q8IWJ2 1684 aa18.78■□□□□ 0.6
TRA2A-209ENST00000494255 ABCC3O15438 1527 aa18.77■□□□□ 0.59
TRA2A-209ENST00000494255 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
TRA2A-209ENST00000494255 CEP152O94986 1710 aa18.76■□□□□ 0.59
TRA2A-209ENST00000494255 NAIPQ13075 1403 aa18.76■□□□□ 0.59
TRA2A-209ENST00000494255 UNC13BO14795 1591 aa18.74■□□□□ 0.59
TRA2A-209ENST00000494255 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
TRA2A-209ENST00000494255 CAMSAP1Q5T5Y3 1602 aa18.72■□□□□ 0.59
TRA2A-209ENST00000494255 NPATQ14207 1427 aa18.72■□□□□ 0.59
TRA2A-209ENST00000494255 PZPP20742 1482 aa18.71■□□□□ 0.59
TRA2A-209ENST00000494255 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
TRA2A-209ENST00000494255 LMTK2Q8IWU2 1503 aa18.7■□□□□ 0.58
TRA2A-209ENST00000494255 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
TRA2A-209ENST00000494255 NUP155O75694 1391 aa18.68■□□□□ 0.58
TRA2A-209ENST00000494255 IQGAP3Q86VI3 1631 aa18.66■□□□□ 0.58
TRA2A-209ENST00000494255 ARHGAP31Q2M1Z3 1444 aa18.66■□□□□ 0.58
TRA2A-209ENST00000494255 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
TRA2A-209ENST00000494255 TET3O43151 1660 aa18.66■□□□□ 0.58
TRA2A-209ENST00000494255 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
TRA2A-209ENST00000494255 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
TRA2A-209ENST00000494255 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
TRA2A-209ENST00000494255 TNRQ92752 1358 aa18.64■□□□□ 0.57
TRA2A-209ENST00000494255 SETD5Q9C0A6 1442 aa18.64■□□□□ 0.57
TRA2A-209ENST00000494255 CFAP65Q6ZU64 1925 aaKnown RBP18.64■□□□□ 0.57
TRA2A-209ENST00000494255 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
TRA2A-209ENST00000494255 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
TRA2A-209ENST00000494255 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
TRA2A-209ENST00000494255 MYO3AQ8NEV4 1616 aa18.61■□□□□ 0.57
TRA2A-209ENST00000494255 SPATA31D1Q6ZQQ2 1576 aa18.61■□□□□ 0.57
TRA2A-209ENST00000494255 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
TRA2A-209ENST00000494255 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
TRA2A-209ENST00000494255 E9PCH4 1651 aa18.57■□□□□ 0.56
TRA2A-209ENST00000494255 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
TRA2A-209ENST00000494255 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
TRA2A-209ENST00000494255 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
TRA2A-209ENST00000494255 CEP170BQ9Y4F5 1589 aaPredicted RBP18.56■□□□□ 0.56
TRA2A-209ENST00000494255 A2ML1A8K2U0 1454 aa18.56■□□□□ 0.56
TRA2A-209ENST00000494255 HSPA2P54652 639 aa18.54■□□□□ 0.56
TRA2A-209ENST00000494255 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
TRA2A-209ENST00000494255 NOS1P29475 1434 aa18.53■□□□□ 0.56
TRA2A-209ENST00000494255 SYNMO15061 1565 aa18.51■□□□□ 0.55
TRA2A-209ENST00000494255 HRCP23327 699 aa18.5■□□□□ 0.55
TRA2A-209ENST00000494255 PKD2Q13563 968 aa18.5■□□□□ 0.55
TRA2A-209ENST00000494255 UGGT1Q9NYU2 1555 aa18.5■□□□□ 0.55
TRA2A-209ENST00000494255 SLC52A1Q9NWF4 448 aa18.49■□□□□ 0.55
TRA2A-209ENST00000494255 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
TRA2A-209ENST00000494255 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
TRA2A-209ENST00000494255 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
TRA2A-209ENST00000494255 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
TRA2A-209ENST00000494255 IDI1Q13907 227 aa18.47■□□□□ 0.55
TRA2A-209ENST00000494255 PIK3C2BO00750 1634 aa18.46■□□□□ 0.55
TRA2A-209ENST00000494255 UBR1Q8IWV7 1749 aa18.45■□□□□ 0.54
TRA2A-209ENST00000494255 PTPRTO14522 1441 aa18.44■□□□□ 0.54
TRA2A-209ENST00000494255 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
TRA2A-209ENST00000494255 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
TRA2A-209ENST00000494255 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
TRA2A-209ENST00000494255 TRPM2O94759 1503 aa18.42■□□□□ 0.54
TRA2A-209ENST00000494255 STRCQ7RTU9 1775 aa18.41■□□□□ 0.54
TRA2A-209ENST00000494255 FOXD1Q16676 465 aa18.41■□□□□ 0.54
TRA2A-209ENST00000494255 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
TRA2A-209ENST00000494255 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
TRA2A-209ENST00000494255 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
TRA2A-209ENST00000494255 NCKAP5LQ9HCH0 1330 aa18.39■□□□□ 0.53
TRA2A-209ENST00000494255 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
TRA2A-209ENST00000494255 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
TRA2A-209ENST00000494255 CLTCL1P53675 1640 aa18.37■□□□□ 0.53
TRA2A-209ENST00000494255 MYO5BQ9ULV0 1848 aa18.36■□□□□ 0.53
TRA2A-209ENST00000494255 SLIT1O75093 1534 aa18.36■□□□□ 0.53
TRA2A-209ENST00000494255 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
TRA2A-209ENST00000494255 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
TRA2A-209ENST00000494255 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
TRA2A-209ENST00000494255 KIF1BO60333 1816 aa18.35■□□□□ 0.53
TRA2A-209ENST00000494255 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
TRA2A-209ENST00000494255 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
TRA2A-209ENST00000494255 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
TRA2A-209ENST00000494255 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
TRA2A-209ENST00000494255 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
TRA2A-209ENST00000494255 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
TRA2A-209ENST00000494255 RIMS2Q9UQ26 1411 aa18.3■□□□□ 0.52
TRA2A-209ENST00000494255 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
TRA2A-209ENST00000494255 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms