RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
MINDY4-203ENST00000494187 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
MINDY4-203ENST00000494187 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
MINDY4-203ENST00000494187 NBR1Q14596 966 aa12.35□□□□□ -0.43
MINDY4-203ENST00000494187 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
MINDY4-203ENST00000494187 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
MINDY4-203ENST00000494187 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
MINDY4-203ENST00000494187 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
MINDY4-203ENST00000494187 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
MINDY4-203ENST00000494187 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
MINDY4-203ENST00000494187 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
MINDY4-203ENST00000494187 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
MINDY4-203ENST00000494187 KANK1Q14678 1352 aa12.34□□□□□ -0.43
MINDY4-203ENST00000494187 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
MINDY4-203ENST00000494187 KDM6BO15054 1643 aa12.33□□□□□ -0.44
MINDY4-203ENST00000494187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
MINDY4-203ENST00000494187 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
MINDY4-203ENST00000494187 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
MINDY4-203ENST00000494187 PLEKHH2Q8IVE3 1493 aa12.31□□□□□ -0.44
MINDY4-203ENST00000494187 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
MINDY4-203ENST00000494187 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
MINDY4-203ENST00000494187 AKNAQ7Z591 1439 aa12.3□□□□□ -0.44
MINDY4-203ENST00000494187 RGS3P49796 1198 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 PPP4R2Q9NY27 417 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
MINDY4-203ENST00000494187 CNTLNQ9NXG0 1405 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 MORC1Q86VD1 984 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
MINDY4-203ENST00000494187 KIAA0556O60303 1618 aa12.28□□□□□ -0.44
MINDY4-203ENST00000494187 SKAP1Q86WV1 359 aa12.28□□□□□ -0.44
MINDY4-203ENST00000494187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
MINDY4-203ENST00000494187 RAPGEF6Q8TEU7 1601 aa12.28□□□□□ -0.44
MINDY4-203ENST00000494187 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
MINDY4-203ENST00000494187 KIF14Q15058 1648 aa12.27□□□□□ -0.45
MINDY4-203ENST00000494187 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
MINDY4-203ENST00000494187 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
MINDY4-203ENST00000494187 EXOC6Q8TAG9 804 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 CLUAP1Q96AJ1 413 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 ADAMTS8Q9UP79 889 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 SAMD9Q5K651 1589 aa12.25□□□□□ -0.45
MINDY4-203ENST00000494187 APAF1O14727 1248 aa12.24□□□□□ -0.45
MINDY4-203ENST00000494187 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
MINDY4-203ENST00000494187 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
MINDY4-203ENST00000494187 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
MINDY4-203ENST00000494187 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
MINDY4-203ENST00000494187 CDCA8Q53HL2 280 aa12.24□□□□□ -0.45
MINDY4-203ENST00000494187 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
MINDY4-203ENST00000494187 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
MINDY4-203ENST00000494187 RALBP1Q15311 655 aa12.23□□□□□ -0.45
MINDY4-203ENST00000494187 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
MINDY4-203ENST00000494187 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
MINDY4-203ENST00000494187 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
MINDY4-203ENST00000494187 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
MINDY4-203ENST00000494187 NEFMP07197 916 aa12.21□□□□□ -0.45
MINDY4-203ENST00000494187 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
MINDY4-203ENST00000494187 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
MINDY4-203ENST00000494187 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
MINDY4-203ENST00000494187 FBLN1P23142 703 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 ERCC6L2Q5T890 1561 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
MINDY4-203ENST00000494187 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 SYCP2Q9BX26 1530 aa12.2□□□□□ -0.46
MINDY4-203ENST00000494187 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
MINDY4-203ENST00000494187 NUP160Q12769 1436 aa12.18□□□□□ -0.46
MINDY4-203ENST00000494187 PZPP20742 1482 aa12.17□□□□□ -0.46
MINDY4-203ENST00000494187 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
MINDY4-203ENST00000494187 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
MINDY4-203ENST00000494187 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
MINDY4-203ENST00000494187 CHD1O14646 1710 aa12.17□□□□□ -0.46
MINDY4-203ENST00000494187 DISP3Q9P2K9 1392 aa12.16□□□□□ -0.46
MINDY4-203ENST00000494187 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
MINDY4-203ENST00000494187 ARXQ96QS3 562 aa12.15□□□□□ -0.46
MINDY4-203ENST00000494187 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
MINDY4-203ENST00000494187 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
MINDY4-203ENST00000494187 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
MINDY4-203ENST00000494187 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
MINDY4-203ENST00000494187 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
MINDY4-203ENST00000494187 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
MINDY4-203ENST00000494187 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
MINDY4-203ENST00000494187 CENPJQ9HC77 1338 aaPredicted RBP12.13□□□□□ -0.47
MINDY4-203ENST00000494187 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
MINDY4-203ENST00000494187 IDI1Q13907 227 aa12.12□□□□□ -0.47
MINDY4-203ENST00000494187 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
MINDY4-203ENST00000494187 MTHFSP49914 203 aa12.12□□□□□ -0.47
MINDY4-203ENST00000494187 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
MINDY4-203ENST00000494187 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
MINDY4-203ENST00000494187 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
MINDY4-203ENST00000494187 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
MINDY4-203ENST00000494187 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
MINDY4-203ENST00000494187 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
MINDY4-203ENST00000494187 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
MINDY4-203ENST00000494187 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
MINDY4-203ENST00000494187 FANCAO15360 1455 aa12.11□□□□□ -0.47
MINDY4-203ENST00000494187 ADGRL1O94910 1474 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms