RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 ABCA8O94911 1581 aa13.39□□□□□ -0.27
TSC1-207ENST00000493467 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
TSC1-207ENST00000493467 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
TSC1-207ENST00000493467 NBPF8Q3BBV2 869 aa13.39□□□□□ -0.27
TSC1-207ENST00000493467 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
TSC1-207ENST00000493467 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
TSC1-207ENST00000493467 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
TSC1-207ENST00000493467 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
TSC1-207ENST00000493467 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
TSC1-207ENST00000493467 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
TSC1-207ENST00000493467 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
TSC1-207ENST00000493467 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
TSC1-207ENST00000493467 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
TSC1-207ENST00000493467 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
TSC1-207ENST00000493467 KDM5CP41229 1560 aa13.35□□□□□ -0.27
TSC1-207ENST00000493467 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
TSC1-207ENST00000493467 KIF7Q2M1P5 1343 aa13.34□□□□□ -0.27
TSC1-207ENST00000493467 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
TSC1-207ENST00000493467 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
TSC1-207ENST00000493467 UHRF1BP1Q6BDS2 1440 aa13.34□□□□□ -0.27
TSC1-207ENST00000493467 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
TSC1-207ENST00000493467 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
TSC1-207ENST00000493467 BCORL1Q5H9F3 1711 aa13.32□□□□□ -0.28
TSC1-207ENST00000493467 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
TSC1-207ENST00000493467 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
TSC1-207ENST00000493467 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
TSC1-207ENST00000493467 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
TSC1-207ENST00000493467 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
TSC1-207ENST00000493467 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
TSC1-207ENST00000493467 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
TSC1-207ENST00000493467 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
TSC1-207ENST00000493467 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
TSC1-207ENST00000493467 PTPRGP23470 1445 aa13.29□□□□□ -0.28
TSC1-207ENST00000493467 C9orf84Q5VXU9 1444 aa13.29□□□□□ -0.28
TSC1-207ENST00000493467 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
TSC1-207ENST00000493467 USP47Q96K76 1375 aa13.28□□□□□ -0.28
TSC1-207ENST00000493467 ATP10BO94823 1461 aa13.28□□□□□ -0.28
TSC1-207ENST00000493467 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TSC1-207ENST00000493467 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
TSC1-207ENST00000493467 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
TSC1-207ENST00000493467 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
TSC1-207ENST00000493467 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
TSC1-207ENST00000493467 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
TSC1-207ENST00000493467 E9PCH4 1651 aa13.25□□□□□ -0.29
TSC1-207ENST00000493467 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
TSC1-207ENST00000493467 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
TSC1-207ENST00000493467 MAST1Q9Y2H9 1570 aa13.23□□□□□ -0.29
TSC1-207ENST00000493467 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
TSC1-207ENST00000493467 SAMD9LQ8IVG5 1584 aa13.23□□□□□ -0.29
TSC1-207ENST00000493467 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
TSC1-207ENST00000493467 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
TSC1-207ENST00000493467 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
TSC1-207ENST00000493467 CCDC141Q6ZP82 1450 aa13.22□□□□□ -0.29
TSC1-207ENST00000493467 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.29
TSC1-207ENST00000493467 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
TSC1-207ENST00000493467 UNC13BO14795 1591 aa13.21□□□□□ -0.29
TSC1-207ENST00000493467 NUP155O75694 1391 aa13.21□□□□□ -0.29
TSC1-207ENST00000493467 KIF15Q9NS87 1388 aa13.2□□□□□ -0.3
TSC1-207ENST00000493467 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
TSC1-207ENST00000493467 LAMC1P11047 1609 aa13.19□□□□□ -0.3
TSC1-207ENST00000493467 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
TSC1-207ENST00000493467 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
TSC1-207ENST00000493467 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
TSC1-207ENST00000493467 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
TSC1-207ENST00000493467 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
TSC1-207ENST00000493467 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
TSC1-207ENST00000493467 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
TSC1-207ENST00000493467 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
TSC1-207ENST00000493467 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
TSC1-207ENST00000493467 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
TSC1-207ENST00000493467 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
TSC1-207ENST00000493467 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
TSC1-207ENST00000493467 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
TSC1-207ENST00000493467 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
TSC1-207ENST00000493467 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.31
TSC1-207ENST00000493467 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.31
TSC1-207ENST00000493467 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
TSC1-207ENST00000493467 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 PRAG1Q86YV5 1406 aa13.13□□□□□ -0.31
TSC1-207ENST00000493467 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
TSC1-207ENST00000493467 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
TSC1-207ENST00000493467 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
TSC1-207ENST00000493467 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
TSC1-207ENST00000493467 CHD1O14646 1710 aa13.12□□□□□ -0.31
TSC1-207ENST00000493467 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
TSC1-207ENST00000493467 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
TSC1-207ENST00000493467 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
TSC1-207ENST00000493467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSC1-207ENST00000493467 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
TSC1-207ENST00000493467 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
TSC1-207ENST00000493467 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.317e-11■■■■□ 22.9
TSC1-207ENST00000493467 ATP10AO60312 1499 aa13.09□□□□□ -0.31
TSC1-207ENST00000493467 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
TSC1-207ENST00000493467 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
TSC1-207ENST00000493467 RALBP1Q15311 655 aa13.09□□□□□ -0.31
TSC1-207ENST00000493467 MYBBP1AQ9BQG0 1328 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms