RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 NCOA1Q15788 1441 aa19.53■□□□□ 0.72
CLIP2-209ENST00000493166 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
CLIP2-209ENST00000493166 ERBINQ96RT1 1412 aa19.52■□□□□ 0.72
CLIP2-209ENST00000493166 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
CLIP2-209ENST00000493166 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
CLIP2-209ENST00000493166 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
CLIP2-209ENST00000493166 ITGAEP38570 1179 aa19.5■□□□□ 0.71
CLIP2-209ENST00000493166 DEPDC5O75140 1603 aa19.5■□□□□ 0.71
CLIP2-209ENST00000493166 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
CLIP2-209ENST00000493166 CEP152O94986 1710 aa19.49■□□□□ 0.71
CLIP2-209ENST00000493166 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
CLIP2-209ENST00000493166 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
CLIP2-209ENST00000493166 PREX1Q8TCU6 1659 aa19.48■□□□□ 0.71
CLIP2-209ENST00000493166 SETD1BQ9UPS6 1966 aaKnown RBP19.47■□□□□ 0.71
CLIP2-209ENST00000493166 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-209ENST00000493166 ROCK1Q13464 1354 aa19.46■□□□□ 0.71
CLIP2-209ENST00000493166 CEBPAP49715 358 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-209ENST00000493166 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
CLIP2-209ENST00000493166 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
CLIP2-209ENST00000493166 ABCC3O15438 1527 aa19.43■□□□□ 0.7
CLIP2-209ENST00000493166 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
CLIP2-209ENST00000493166 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
CLIP2-209ENST00000493166 GCC2Q8IWJ2 1684 aa19.42■□□□□ 0.7
CLIP2-209ENST00000493166 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
CLIP2-209ENST00000493166 UNC13BO14795 1591 aa19.39■□□□□ 0.69
CLIP2-209ENST00000493166 NPATQ14207 1427 aa19.38■□□□□ 0.69
CLIP2-209ENST00000493166 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
CLIP2-209ENST00000493166 PZPP20742 1482 aa19.37■□□□□ 0.69
CLIP2-209ENST00000493166 KANK1Q14678 1352 aa19.37■□□□□ 0.69
CLIP2-209ENST00000493166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLIP2-209ENST00000493166 MYO3AQ8NEV4 1616 aa19.36■□□□□ 0.69
CLIP2-209ENST00000493166 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
CLIP2-209ENST00000493166 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
CLIP2-209ENST00000493166 ZNF142P52746 1687 aaPredicted RBP19.33■□□□□ 0.69
CLIP2-209ENST00000493166 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
CLIP2-209ENST00000493166 TET3O43151 1660 aa19.31■□□□□ 0.68
CLIP2-209ENST00000493166 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
CLIP2-209ENST00000493166 NAIPQ13075 1403 aa19.31■□□□□ 0.68
CLIP2-209ENST00000493166 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
CLIP2-209ENST00000493166 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
CLIP2-209ENST00000493166 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
CLIP2-209ENST00000493166 CEP170BQ9Y4F5 1589 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-209ENST00000493166 ARHGAP31Q2M1Z3 1444 aa19.27■□□□□ 0.68
CLIP2-209ENST00000493166 FBXO31Q5XUX0 539 aaPredicted RBP19.27■□□□□ 0.68
CLIP2-209ENST00000493166 TNRQ92752 1358 aa19.27■□□□□ 0.68
CLIP2-209ENST00000493166 ERVK-7P63135 1459 aa19.27■□□□□ 0.67
CLIP2-209ENST00000493166 HSPA2P54652 639 aa19.25■□□□□ 0.67
CLIP2-209ENST00000493166 E9PCH4 1651 aa19.24■□□□□ 0.67
CLIP2-209ENST00000493166 A2ML1A8K2U0 1454 aa19.22■□□□□ 0.67
CLIP2-209ENST00000493166 NUP155O75694 1391 aa19.22■□□□□ 0.67
CLIP2-209ENST00000493166 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
CLIP2-209ENST00000493166 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
CLIP2-209ENST00000493166 RPRD2Q5VT52 1461 aaKnown RBP19.21■□□□□ 0.67
CLIP2-209ENST00000493166 SYNMO15061 1565 aa19.19■□□□□ 0.66
CLIP2-209ENST00000493166 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
CLIP2-209ENST00000493166 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-209ENST00000493166 UGGT1Q9NYU2 1555 aa19.16■□□□□ 0.66
CLIP2-209ENST00000493166 PIK3C2BO00750 1634 aa19.16■□□□□ 0.66
CLIP2-209ENST00000493166 SPHKAPQ2M3C7 1700 aa19.16■□□□□ 0.66
CLIP2-209ENST00000493166 NOS1P29475 1434 aa19.15■□□□□ 0.66
CLIP2-209ENST00000493166 TRIM52Q96A61 297 aa19.14■□□□□ 0.65
CLIP2-209ENST00000493166 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.65
CLIP2-209ENST00000493166 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
CLIP2-209ENST00000493166 PLA2R1Q13018 1463 aa19.13■□□□□ 0.65
CLIP2-209ENST00000493166 MYO5BQ9ULV0 1848 aa19.13■□□□□ 0.65
CLIP2-209ENST00000493166 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-209ENST00000493166 THEMISQ8N1K5 641 aaPredicted RBP19.08■□□□□ 0.64
CLIP2-209ENST00000493166 ADGRB3O60242 1522 aa19.08■□□□□ 0.64
CLIP2-209ENST00000493166 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
CLIP2-209ENST00000493166 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
CLIP2-209ENST00000493166 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
CLIP2-209ENST00000493166 IDI1Q13907 227 aa19.05■□□□□ 0.64
CLIP2-209ENST00000493166 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
CLIP2-209ENST00000493166 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
CLIP2-209ENST00000493166 TMEM131LA2VDJ0 1609 aa19.04■□□□□ 0.64
CLIP2-209ENST00000493166 PKD2Q13563 968 aa19.04■□□□□ 0.64
CLIP2-209ENST00000493166 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CLIP2-209ENST00000493166 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
CLIP2-209ENST00000493166 NEURL4Q96JN8 1562 aa19.03■□□□□ 0.64
CLIP2-209ENST00000493166 KIF1BO60333 1816 aa19.03■□□□□ 0.64
CLIP2-209ENST00000493166 TRPM2O94759 1503 aa19.03■□□□□ 0.64
CLIP2-209ENST00000493166 PTPRTO14522 1441 aa19.02■□□□□ 0.64
CLIP2-209ENST00000493166 SLIT1O75093 1534 aa19.02■□□□□ 0.64
CLIP2-209ENST00000493166 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
CLIP2-209ENST00000493166 CLTCL1P53675 1640 aa19.01■□□□□ 0.63
CLIP2-209ENST00000493166 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
CLIP2-209ENST00000493166 ARHGAP23Q9P227 1491 aa19■□□□□ 0.63
CLIP2-209ENST00000493166 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
CLIP2-209ENST00000493166 TMEM2Q9UHN6 1383 aa18.97■□□□□ 0.63
CLIP2-209ENST00000493166 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
CLIP2-209ENST00000493166 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
CLIP2-209ENST00000493166 MED14O60244 1454 aa18.96■□□□□ 0.63
CLIP2-209ENST00000493166 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-209ENST00000493166 HRCP23327 699 aa18.94■□□□□ 0.62
CLIP2-209ENST00000493166 FOXD1Q16676 465 aa18.94■□□□□ 0.62
CLIP2-209ENST00000493166 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
CLIP2-209ENST00000493166 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
CLIP2-209ENST00000493166 LTKP29376 864 aa18.91■□□□□ 0.62
CLIP2-209ENST00000493166 TRIM26Q12899 539 aaPredicted RBP18.91■□□□□ 0.62
CLIP2-209ENST00000493166 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms