RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
SEC13-218ENST00000490283 DUOX2Q9NRD8 1548 aa26.98■■□□□ 1.91
SEC13-218ENST00000490283 KIF15Q9NS87 1388 aa26.97■■□□□ 1.91
SEC13-218ENST00000490283 DNMT1P26358 1616 aaKnown RBP26.96■■□□□ 1.91
SEC13-218ENST00000490283 CROCC2H7BZ55 1655 aa26.95■■□□□ 1.91
SEC13-218ENST00000490283 EIF2AK4Q9P2K8 1649 aaKnown RBP26.95■■□□□ 1.91
SEC13-218ENST00000490283 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
SEC13-218ENST00000490283 RRP7BPQ9NSQ0 103 aa26.94■■□□□ 1.9
SEC13-218ENST00000490283 RNF17Q9BXT8 1623 aaKnown RBP26.92■■□□□ 1.9
SEC13-218ENST00000490283 ILDR1Q86SU0 546 aaPredicted RBP26.92■■□□□ 1.9
SEC13-218ENST00000490283 ANKRD30AQ9BXX3 1397 aa26.92■■□□□ 1.9
SEC13-218ENST00000490283 PZPP20742 1482 aa26.91■■□□□ 1.9
SEC13-218ENST00000490283 ERBINQ96RT1 1412 aa26.9■■□□□ 1.9
SEC13-218ENST00000490283 MYO3AQ8NEV4 1616 aa26.9■■□□□ 1.9
SEC13-218ENST00000490283 CHIC2Q9UKJ5 165 aa26.9■■□□□ 1.9
SEC13-218ENST00000490283 TNRQ92752 1358 aa26.88■■□□□ 1.89
SEC13-218ENST00000490283 NCOA1Q15788 1441 aa26.87■■□□□ 1.89
SEC13-218ENST00000490283 CEP170BQ9Y4F5 1589 aaPredicted RBP26.87■■□□□ 1.89
SEC13-218ENST00000490283 FBXO31Q5XUX0 539 aaPredicted RBP26.86■■□□□ 1.89
SEC13-218ENST00000490283 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
SEC13-218ENST00000490283 ABCC3O15438 1527 aa26.85■■□□□ 1.89
SEC13-218ENST00000490283 STRCQ7RTU9 1775 aa26.85■■□□□ 1.89
SEC13-218ENST00000490283 CAMSAP1Q5T5Y3 1602 aa26.85■■□□□ 1.89
SEC13-218ENST00000490283 ZNF142P52746 1687 aaPredicted RBP26.85■■□□□ 1.89
SEC13-218ENST00000490283 PTPRTO14522 1441 aa26.84■■□□□ 1.89
SEC13-218ENST00000490283 A2ML1A8K2U0 1454 aa26.83■■□□□ 1.89
SEC13-218ENST00000490283 KANK1Q14678 1352 aa26.82■■□□□ 1.88
SEC13-218ENST00000490283 PLA2R1Q13018 1463 aa26.81■■□□□ 1.88
SEC13-218ENST00000490283 FBXO41Q8TF61 875 aa26.8■■□□□ 1.88
SEC13-218ENST00000490283 MROH1Q8NDA8 1641 aa26.79■■□□□ 1.88
SEC13-218ENST00000490283 PKD2Q13563 968 aa26.79■■□□□ 1.88
SEC13-218ENST00000490283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.79■■□□□ 1.88
SEC13-218ENST00000490283 ADGRL2O95490 1459 aa26.79■■□□□ 1.88
SEC13-218ENST00000490283 PRDM15P57071 1507 aaPredicted RBP26.78■■□□□ 1.88
SEC13-218ENST00000490283 NLRP1Q9C000 1473 aa26.77■■□□□ 1.88
SEC13-218ENST00000490283 PPARGC1BQ86YN6 1023 aaKnown RBP26.77■■□□□ 1.88
SEC13-218ENST00000490283 NCKAP5LQ9HCH0 1330 aa26.76■■□□□ 1.87
SEC13-218ENST00000490283 CERKQ8TCT0 537 aa26.75■■□□□ 1.87
SEC13-218ENST00000490283 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
SEC13-218ENST00000490283 CEP152O94986 1710 aa26.72■■□□□ 1.87
SEC13-218ENST00000490283 ERVK-7P63135 1459 aa26.72■■□□□ 1.87
SEC13-218ENST00000490283 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
SEC13-218ENST00000490283 DEPDC5O75140 1603 aa26.7■■□□□ 1.86
SEC13-218ENST00000490283 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
SEC13-218ENST00000490283 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
SEC13-218ENST00000490283 UGGT1Q9NYU2 1555 aa26.68■■□□□ 1.86
SEC13-218ENST00000490283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.66■■□□□ 1.86
SEC13-218ENST00000490283 ITGAEP38570 1179 aa26.65■■□□□ 1.86
SEC13-218ENST00000490283 ROCK1Q13464 1354 aa26.64■■□□□ 1.86
SEC13-218ENST00000490283 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
SEC13-218ENST00000490283 LMTK2Q8IWU2 1503 aa26.63■■□□□ 1.85
SEC13-218ENST00000490283 VWDEQ8N2E2 1590 aa26.6■■□□□ 1.85
SEC13-218ENST00000490283 POLR1AO95602 1720 aaPredicted RBP26.56■■□□□ 1.84
SEC13-218ENST00000490283 STAG3Q9UJ98 1225 aa26.55■■□□□ 1.84
SEC13-218ENST00000490283 ZNF335Q9H4Z2 1342 aaPredicted RBP26.55■■□□□ 1.84
SEC13-218ENST00000490283 EFCAB6Q5THR3 1501 aa26.55■■□□□ 1.84
SEC13-218ENST00000490283 LTBP4Q8N2S1 1624 aa26.54■■□□□ 1.84
SEC13-218ENST00000490283 CFAP65Q6ZU64 1925 aaKnown RBP26.54■■□□□ 1.84
SEC13-218ENST00000490283 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
SEC13-218ENST00000490283 NEURL4Q96JN8 1562 aa26.51■■□□□ 1.83
SEC13-218ENST00000490283 NPHP4O75161 1426 aaPredicted RBP26.51■■□□□ 1.83
SEC13-218ENST00000490283 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
SEC13-218ENST00000490283 RPRD2Q5VT52 1461 aaKnown RBP26.49■■□□□ 1.83
SEC13-218ENST00000490283 MED14O60244 1454 aa26.49■■□□□ 1.83
SEC13-218ENST00000490283 UNC13BO14795 1591 aa26.48■■□□□ 1.83
SEC13-218ENST00000490283 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
SEC13-218ENST00000490283 EID1Q9Y6B2 187 aa26.47■■□□□ 1.83
SEC13-218ENST00000490283 NOS1P29475 1434 aa26.46■■□□□ 1.83
SEC13-218ENST00000490283 TET3O43151 1660 aa26.45■■□□□ 1.82
SEC13-218ENST00000490283 SLC52A1Q9NWF4 448 aa26.45■■□□□ 1.82
SEC13-218ENST00000490283 SCAF11Q99590 1463 aaKnown RBP26.44■■□□□ 1.82
SEC13-218ENST00000490283 IDI1Q13907 227 aa26.44■■□□□ 1.82
SEC13-218ENST00000490283 NUP155O75694 1391 aa26.44■■□□□ 1.82
SEC13-218ENST00000490283 PIK3C2BO00750 1634 aa26.43■■□□□ 1.82
SEC13-218ENST00000490283 TXNDC2Q86VQ3 553 aa26.43■■□□□ 1.82
SEC13-218ENST00000490283 SLIT1O75093 1534 aa26.42■■□□□ 1.82
SEC13-218ENST00000490283 SYNMO15061 1565 aa26.41■■□□□ 1.82
SEC13-218ENST00000490283 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
SEC13-218ENST00000490283 ARHGAP23Q9P227 1491 aa26.41■■□□□ 1.82
SEC13-218ENST00000490283 TMEM2Q9UHN6 1383 aa26.4■■□□□ 1.82
SEC13-218ENST00000490283 CPS1P31327 1500 aa26.39■■□□□ 1.82
SEC13-218ENST00000490283 GCC2Q8IWJ2 1684 aa26.39■■□□□ 1.82
SEC13-218ENST00000490283 IQGAP3Q86VI3 1631 aa26.38■■□□□ 1.81
SEC13-218ENST00000490283 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
SEC13-218ENST00000490283 LTKP29376 864 aa26.37■■□□□ 1.81
SEC13-218ENST00000490283 ADGRB3O60242 1522 aa26.36■■□□□ 1.81
SEC13-218ENST00000490283 UBAP1LF5GYI3 381 aa26.32■■□□□ 1.8
SEC13-218ENST00000490283 NAIPQ13075 1403 aa26.31■■□□□ 1.8
SEC13-218ENST00000490283 HDGFP51858 240 aaKnown RBP26.3■■□□□ 1.8
SEC13-218ENST00000490283 E9PCH4 1651 aa26.3■■□□□ 1.8
SEC13-218ENST00000490283 CHGAP10645 457 aaKnown RBP26.29■■□□□ 1.8
SEC13-218ENST00000490283 HFM1A2PYH4 1435 aa26.27■■□□□ 1.8
SEC13-218ENST00000490283 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
SEC13-218ENST00000490283 BCANQ96GW7 911 aa26.26■■□□□ 1.79
SEC13-218ENST00000490283 TOM1O60784 492 aa26.23■■□□□ 1.79
SEC13-218ENST00000490283 TRIM52Q96A61 297 aa26.23■■□□□ 1.79
SEC13-218ENST00000490283 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.22■■□□□ 1.79
SEC13-218ENST00000490283 RIMS2Q9UQ26 1411 aa26.21■■□□□ 1.79
SEC13-218ENST00000490283 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
SEC13-218ENST00000490283 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms