RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 NCOA1Q15788 1441 aa29.35■■■□□ 2.29
EPHB4-207ENST00000489808 UHRF1BP1Q6BDS2 1440 aa29.34■■■□□ 2.29
EPHB4-207ENST00000489808 MROH2AA6NES4 1674 aa29.33■■■□□ 2.29
EPHB4-207ENST00000489808 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
EPHB4-207ENST00000489808 CLTCQ00610 1675 aaKnown RBP29.32■■■□□ 2.28
EPHB4-207ENST00000489808 PTPRKQ15262 1439 aa29.31■■■□□ 2.28
EPHB4-207ENST00000489808 CROCC2H7BZ55 1655 aa29.31■■■□□ 2.28
EPHB4-207ENST00000489808 ERBINQ96RT1 1412 aa29.29■■■□□ 2.28
EPHB4-207ENST00000489808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.28■■■□□ 2.28
EPHB4-207ENST00000489808 FAM135AQ9P2D6 1515 aa29.27■■■□□ 2.28
EPHB4-207ENST00000489808 FBXO31Q5XUX0 539 aaPredicted RBP29.27■■■□□ 2.28
EPHB4-207ENST00000489808 ADGRL2O95490 1459 aa29.27■■■□□ 2.28
EPHB4-207ENST00000489808 KDM5DQ9BY66 1539 aa29.26■■■□□ 2.27
EPHB4-207ENST00000489808 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
EPHB4-207ENST00000489808 EIF2AK4Q9P2K8 1649 aaKnown RBP29.25■■■□□ 2.27
EPHB4-207ENST00000489808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.24■■■□□ 2.274e-6■□□□□ 11.1
EPHB4-207ENST00000489808 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
EPHB4-207ENST00000489808 ITGAEP38570 1179 aa29.22■■■□□ 2.27
EPHB4-207ENST00000489808 PZPP20742 1482 aa29.19■■■□□ 2.26
EPHB4-207ENST00000489808 ABCC3O15438 1527 aa29.18■■■□□ 2.26
EPHB4-207ENST00000489808 ROCK1Q13464 1354 aa29.17■■■□□ 2.26
EPHB4-207ENST00000489808 RRBP1Q9P2E9 1410 aaKnown RBP29.17■■■□□ 2.26
EPHB4-207ENST00000489808 MROH1Q8NDA8 1641 aa29.16■■■□□ 2.26
EPHB4-207ENST00000489808 TNRQ92752 1358 aa29.16■■■□□ 2.26
EPHB4-207ENST00000489808 ANKRD50Q9ULJ7 1429 aa29.16■■■□□ 2.26
EPHB4-207ENST00000489808 KANK1Q14678 1352 aa29.13■■■□□ 2.25
EPHB4-207ENST00000489808 DMRT2Q9Y5R5 561 aa29.11■■■□□ 2.25
EPHB4-207ENST00000489808 PRDM15P57071 1507 aaPredicted RBP29.1■■■□□ 2.25
EPHB4-207ENST00000489808 ZC3H13Q5T200 1668 aaKnown RBP29.06■■■□□ 2.24
EPHB4-207ENST00000489808 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
EPHB4-207ENST00000489808 A2ML1A8K2U0 1454 aa29.05■■■□□ 2.24
EPHB4-207ENST00000489808 DEPDC5O75140 1603 aa29.05■■■□□ 2.24
EPHB4-207ENST00000489808 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
EPHB4-207ENST00000489808 NCKAP5LQ9HCH0 1330 aa29.02■■■□□ 2.24
EPHB4-207ENST00000489808 CEP170BQ9Y4F5 1589 aaPredicted RBP29.02■■■□□ 2.24
EPHB4-207ENST00000489808 ERVK-7P63135 1459 aa29.01■■■□□ 2.23
EPHB4-207ENST00000489808 CAMSAP1Q5T5Y3 1602 aa29.01■■■□□ 2.23
EPHB4-207ENST00000489808 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.23
EPHB4-207ENST00000489808 LMTK2Q8IWU2 1503 aa29■■■□□ 2.23
EPHB4-207ENST00000489808 NLRP1Q9C000 1473 aa29■■■□□ 2.23
EPHB4-207ENST00000489808 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
EPHB4-207ENST00000489808 STRCQ7RTU9 1775 aa28.99■■■□□ 2.23
EPHB4-207ENST00000489808 PKD2Q13563 968 aa28.99■■■□□ 2.23
EPHB4-207ENST00000489808 SPATA31D1Q6ZQQ2 1576 aa28.99■■■□□ 2.23
EPHB4-207ENST00000489808 CEP152O94986 1710 aa28.99■■■□□ 2.23
EPHB4-207ENST00000489808 PTPRTO14522 1441 aa28.97■■■□□ 2.23
EPHB4-207ENST00000489808 PLA2R1Q13018 1463 aa28.96■■■□□ 2.23
EPHB4-207ENST00000489808 ZNF142P52746 1687 aaPredicted RBP28.96■■■□□ 2.23
EPHB4-207ENST00000489808 NUP155O75694 1391 aa28.9■■■□□ 2.22
EPHB4-207ENST00000489808 ANKLE2Q86XL3 938 aa28.9■■■□□ 2.22
EPHB4-207ENST00000489808 UGGT1Q9NYU2 1555 aa28.88■■■□□ 2.21
EPHB4-207ENST00000489808 IDI1Q13907 227 aa28.87■■■□□ 2.21
EPHB4-207ENST00000489808 NAIPQ13075 1403 aa28.86■■■□□ 2.21
EPHB4-207ENST00000489808 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
EPHB4-207ENST00000489808 NOS1P29475 1434 aa28.86■■■□□ 2.21
EPHB4-207ENST00000489808 EFCAB6Q5THR3 1501 aa28.85■■■□□ 2.21
EPHB4-207ENST00000489808 UNC13BO14795 1591 aa28.84■■■□□ 2.21
EPHB4-207ENST00000489808 SLC52A1Q9NWF4 448 aa28.84■■■□□ 2.21
EPHB4-207ENST00000489808 RPRD2Q5VT52 1461 aaKnown RBP28.83■■■□□ 2.21
EPHB4-207ENST00000489808 CERKQ8TCT0 537 aa28.82■■■□□ 2.2
EPHB4-207ENST00000489808 STAG3Q9UJ98 1225 aa28.81■■■□□ 2.2
EPHB4-207ENST00000489808 ILDR1Q86SU0 546 aaPredicted RBP28.8■■■□□ 2.2
EPHB4-207ENST00000489808 HFM1A2PYH4 1435 aa28.79■■■□□ 2.2
EPHB4-207ENST00000489808 TET3O43151 1660 aa28.77■■■□□ 2.2
EPHB4-207ENST00000489808 IQGAP3Q86VI3 1631 aa28.74■■■□□ 2.19
EPHB4-207ENST00000489808 TXNDC2Q86VQ3 553 aa28.74■■■□□ 2.19
EPHB4-207ENST00000489808 FBXO41Q8TF61 875 aa28.74■■■□□ 2.19
EPHB4-207ENST00000489808 SYNMO15061 1565 aa28.73■■■□□ 2.19
EPHB4-207ENST00000489808 LTKP29376 864 aa28.73■■■□□ 2.19
EPHB4-207ENST00000489808 TRIM52Q96A61 297 aa28.73■■■□□ 2.19
EPHB4-207ENST00000489808 ZNF335Q9H4Z2 1342 aaPredicted RBP28.71■■■□□ 2.19
EPHB4-207ENST00000489808 EID1Q9Y6B2 187 aa28.71■■■□□ 2.19
EPHB4-207ENST00000489808 MED14O60244 1454 aa28.71■■■□□ 2.19
EPHB4-207ENST00000489808 NPHP4O75161 1426 aaPredicted RBP28.7■■■□□ 2.19
EPHB4-207ENST00000489808 TMEM2Q9UHN6 1383 aa28.7■■■□□ 2.18
EPHB4-207ENST00000489808 UBR1Q8IWV7 1749 aa28.69■■■□□ 2.18
EPHB4-207ENST00000489808 ARHGAP23Q9P227 1491 aa28.69■■■□□ 2.18
EPHB4-207ENST00000489808 NEURL4Q96JN8 1562 aa28.68■■■□□ 2.18
EPHB4-207ENST00000489808 PIK3C2BO00750 1634 aa28.68■■■□□ 2.18
EPHB4-207ENST00000489808 GCC2Q8IWJ2 1684 aa28.67■■■□□ 2.18
EPHB4-207ENST00000489808 SLIT1O75093 1534 aa28.67■■■□□ 2.18
EPHB4-207ENST00000489808 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
EPHB4-207ENST00000489808 E9PCH4 1651 aa28.64■■■□□ 2.18
EPHB4-207ENST00000489808 SCAF11Q99590 1463 aaKnown RBP28.64■■■□□ 2.17
EPHB4-207ENST00000489808 CHGAP10645 457 aaKnown RBP28.62■■■□□ 2.17
EPHB4-207ENST00000489808 SLC4A1APQ9BWU0 796 aaKnown RBP28.61■■■□□ 2.17
EPHB4-207ENST00000489808 POLR1AO95602 1720 aaPredicted RBP28.6■■■□□ 2.17
EPHB4-207ENST00000489808 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.17
EPHB4-207ENST00000489808 HDGFP51858 240 aaKnown RBP28.58■■■□□ 2.17
EPHB4-207ENST00000489808 ADGRB3O60242 1522 aa28.58■■■□□ 2.17
EPHB4-207ENST00000489808 SETD5Q9C0A6 1442 aa28.54■■■□□ 2.16
EPHB4-207ENST00000489808 ACIN1Q9UKV3 1341 aaKnown RBP28.52■■■□□ 2.16
EPHB4-207ENST00000489808 IQGAP1P46940 1657 aa28.51■■■□□ 2.16
EPHB4-207ENST00000489808 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.51■■■□□ 2.15
EPHB4-207ENST00000489808 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
EPHB4-207ENST00000489808 MPHOSPH9Q99550 1183 aa28.5■■■□□ 2.15
EPHB4-207ENST00000489808 ZFYVE9O95405 1425 aa28.5■■■□□ 2.15
EPHB4-207ENST00000489808 TMEM131LA2VDJ0 1609 aa28.5■■■□□ 2.15
EPHB4-207ENST00000489808 IQSEC2Q5JU85 1478 aa28.48■■■□□ 2.15
EPHB4-207ENST00000489808 PPP1R15AO75807 674 aaPredicted RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms